RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-215ENST00000557517 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.56□□□□□ -0.4
PSMC6-215ENST00000557517 GMCL1Q96IK5 515 aa12.56□□□□□ -0.4
PSMC6-215ENST00000557517 MMP19Q99542 508 aa12.56□□□□□ -0.4
PSMC6-215ENST00000557517 SLC38A10Q9HBR0 1119 aa12.56□□□□□ -0.4
PSMC6-215ENST00000557517 BOLA1Q9Y3E2 137 aa12.56□□□□□ -0.4
PSMC6-215ENST00000557517 A0A0D9SFI3 127 aa12.55□□□□□ -0.4
PSMC6-215ENST00000557517 ORC4O43929 436 aa12.55□□□□□ -0.4
PSMC6-215ENST00000557517 PGK2P07205 417 aa12.55□□□□□ -0.4
PSMC6-215ENST00000557517 HSPD1P10809 573 aaKnown RBP12.55□□□□□ -0.4
PSMC6-215ENST00000557517 BMP3P12645 472 aa12.55□□□□□ -0.4
PSMC6-215ENST00000557517 CTDSPL2Q05D32 466 aa12.55□□□□□ -0.4
PSMC6-215ENST00000557517 PRAMEF19Q5SWL8 479 aa12.55□□□□□ -0.4
PSMC6-215ENST00000557517 SLFN13Q68D06 897 aa12.55□□□□□ -0.4
PSMC6-215ENST00000557517 Q7L0L9 218 aa12.55□□□□□ -0.4
PSMC6-215ENST00000557517 C7orf61Q8IZ16 206 aa12.55□□□□□ -0.4
PSMC6-215ENST00000557517 MSL3Q8N5Y2 521 aaKnown RBP12.55□□□□□ -0.4
PSMC6-215ENST00000557517 ARRDC4Q8NCT1 418 aa12.55□□□□□ -0.4
PSMC6-215ENST00000557517 TINF2Q9BSI4 451 aa12.55□□□□□ -0.4
PSMC6-215ENST00000557517 COL25A1Q9BXS0 654 aaPredicted RBP12.55□□□□□ -0.4
PSMC6-215ENST00000557517 ZMYND8Q9ULU4 1186 aaPredicted RBP12.55□□□□□ -0.4
PSMC6-215ENST00000557517 NAV1Q8NEY1 1877 aa12.55□□□□□ -0.4
PSMC6-215ENST00000557517 TSPY2A6NKD2 308 aa12.54□□□□□ -0.4
PSMC6-215ENST00000557517 SDSP20132 328 aa12.54□□□□□ -0.4
PSMC6-215ENST00000557517 SNRNP48Q6IEG0 339 aaKnown RBP12.54□□□□□ -0.4
PSMC6-215ENST00000557517 RCSD1Q6JBY9 416 aa12.54□□□□□ -0.4
PSMC6-215ENST00000557517 MAMDC4Q6UXC1 1216 aa12.54□□□□□ -0.4
PSMC6-215ENST00000557517 SPNS2Q8IVW8 549 aa12.54□□□□□ -0.4
PSMC6-215ENST00000557517 LRRC47Q8N1G4 583 aaKnown RBP12.54□□□□□ -0.4
PSMC6-215ENST00000557517 CHURC1Q8WUH1 139 aa12.54□□□□□ -0.4
PSMC6-215ENST00000557517 STAG1Q8WVM7 1258 aa12.54□□□□□ -0.4
PSMC6-215ENST00000557517 KIFC2Q96AC6 838 aa12.54□□□□□ -0.4
PSMC6-215ENST00000557517 TCP11L1Q9NUJ3 509 aa12.54□□□□□ -0.4
PSMC6-215ENST00000557517 TRIM6-TRIM34B2RNG4 842 aa12.53□□□□□ -0.4
PSMC6-215ENST00000557517 TMEM232C9JQI7 657 aa12.53□□□□□ -0.4
PSMC6-215ENST00000557517 NMT2O60551 498 aa12.53□□□□□ -0.4
PSMC6-215ENST00000557517 ZNF865P0CJ78 1059 aaPredicted RBP12.53□□□□□ -0.4
PSMC6-215ENST00000557517 MCCP23508 829 aa12.53□□□□□ -0.4
PSMC6-215ENST00000557517 SLC1A4P43007 532 aa12.53□□□□□ -0.4
PSMC6-215ENST00000557517 NMIQ13287 307 aaPredicted RBP12.53□□□□□ -0.4
PSMC6-215ENST00000557517 LRRC26Q2I0M4 334 aa12.53□□□□□ -0.4
PSMC6-215ENST00000557517 ZNF589Q86UQ0 364 aaPredicted RBP12.53□□□□□ -0.4
PSMC6-215ENST00000557517 TDHQ8IZJ6 230 aa12.53□□□□□ -0.4
PSMC6-215ENST00000557517 CPXCR1Q8N123 301 aa12.53□□□□□ -0.4
PSMC6-215ENST00000557517 CHST13Q8NET6 341 aa12.53□□□□□ -0.4
PSMC6-215ENST00000557517 SENP6Q9GZR1 1112 aaPredicted RBP12.53□□□□□ -0.4
PSMC6-215ENST00000557517 RAVER2Q9HCJ3 691 aaKnown RBP12.53□□□□□ -0.4
PSMC6-215ENST00000557517 FBXO40Q9UH90 709 aa12.53□□□□□ -0.4
PSMC6-215ENST00000557517 STX8Q9UNK0 236 aa12.53□□□□□ -0.4
PSMC6-215ENST00000557517 SUPT16HQ9Y5B9 1047 aaKnown RBP12.53□□□□□ -0.4
PSMC6-215ENST00000557517 ZMYM6O95789 1325 aa12.53□□□□□ -0.4
PSMC6-215ENST00000557517 RANBP6O60518 1105 aaKnown RBP12.52□□□□□ -0.41
PSMC6-215ENST00000557517 SNAI1O95863 264 aaPredicted RBP12.52□□□□□ -0.41
PSMC6-215ENST00000557517 PCP11498 1178 aaKnown RBP12.52□□□□□ -0.41
PSMC6-215ENST00000557517 MAGEA10P43363 369 aaPredicted RBP12.52□□□□□ -0.41
PSMC6-215ENST00000557517 STAT2P52630 851 aa12.52□□□□□ -0.41
PSMC6-215ENST00000557517 MMRN1Q13201 1228 aa12.52□□□□□ -0.41
PSMC6-215ENST00000557517 FAM160B2Q86V87 743 aa12.52□□□□□ -0.41
PSMC6-215ENST00000557517 RILPL2Q969X0 211 aa12.52□□□□□ -0.41
PSMC6-215ENST00000557517 DDX11Q96FC9 970 aa12.52□□□□□ -0.41
PSMC6-215ENST00000557517 TTC14Q96N46 770 aa12.52□□□□□ -0.41
PSMC6-215ENST00000557517 ZNF536O15090 1300 aa12.52□□□□□ -0.41
PSMC6-215ENST00000557517 RLFQ13129 1914 aa12.52□□□□□ -0.41
PSMC6-215ENST00000557517 TAL1P17542 331 aaPredicted RBP12.51□□□□□ -0.41
PSMC6-215ENST00000557517 SYN1P17600 705 aa12.51□□□□□ -0.41
PSMC6-215ENST00000557517 GJC2Q5T442 439 aaPredicted RBP12.51□□□□□ -0.41
PSMC6-215ENST00000557517 C1orf53Q5VUE5 145 aa12.51□□□□□ -0.41
PSMC6-215ENST00000557517 SLC39A5Q6ZMH5 540 aa12.51□□□□□ -0.41
PSMC6-215ENST00000557517 CCDC171Q6TFL3 1326 aa12.51□□□□□ -0.41
PSMC6-215ENST00000557517 SYNGAP1Q96PV0 1343 aa12.51□□□□□ -0.41
PSMC6-215ENST00000557517 VCANP13611 3396 aa12.5□□□□□ -0.41
PSMC6-215ENST00000557517 TOP1P11387 765 aaKnown RBP12.5□□□□□ -0.41
PSMC6-215ENST00000557517 NT5C2P49902 561 aa12.5□□□□□ -0.41
PSMC6-215ENST00000557517 MFAP1P55081 439 aaKnown RBP12.5□□□□□ -0.41
PSMC6-215ENST00000557517 SNX17Q15036 470 aa12.5□□□□□ -0.41
PSMC6-215ENST00000557517 LRRC41Q15345 812 aa12.5□□□□□ -0.41
PSMC6-215ENST00000557517 AKNAD1Q5T1N1 836 aa12.5□□□□□ -0.41
PSMC6-215ENST00000557517 ANO1Q5XXA6 986 aa12.5□□□□□ -0.41
PSMC6-215ENST00000557517 BTNL9Q6UXG8 535 aa12.5□□□□□ -0.41
PSMC6-215ENST00000557517 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.5□□□□□ -0.41
PSMC6-215ENST00000557517 ANKRD35Q8N283 1001 aa12.5□□□□□ -0.41
PSMC6-215ENST00000557517 FGD4Q96M96 766 aa12.5□□□□□ -0.41
PSMC6-215ENST00000557517 TMEM47Q9BQJ4 181 aa12.5□□□□□ -0.41
PSMC6-215ENST00000557517 PRR12Q9ULL5 1215 aa12.5□□□□□ -0.41
PSMC6-215ENST00000557517 CNPY2Q9Y2B0 182 aa12.5□□□□□ -0.41
PSMC6-215ENST00000557517 CTDP1Q9Y5B0 961 aaPredicted RBP12.5□□□□□ -0.41
PSMC6-215ENST00000557517 A0A0G2JMZ2 1700 aa12.5□□□□□ -0.41
PSMC6-215ENST00000557517 FAM205CA6NFA0 338 aa12.49□□□□□ -0.41
PSMC6-215ENST00000557517 HIP1O00291 1037 aa12.49□□□□□ -0.41
PSMC6-215ENST00000557517 RARBP10826 455 aa12.49□□□□□ -0.41
PSMC6-215ENST00000557517 AKR1A1P14550 325 aa12.49□□□□□ -0.41
PSMC6-215ENST00000557517 ADCYAP1R1P41586 468 aa12.49□□□□□ -0.41
PSMC6-215ENST00000557517 TKFCQ3LXA3 575 aa12.49□□□□□ -0.41
PSMC6-215ENST00000557517 FAM109BQ6ICB4 259 aaPredicted RBP12.49□□□□□ -0.41
PSMC6-215ENST00000557517 CWC27Q6UX04 472 aaKnown RBP12.49□□□□□ -0.41
PSMC6-215ENST00000557517 MFSD6Q6ZSS7 791 aa12.49□□□□□ -0.41
PSMC6-215ENST00000557517 KCTD1Q719H9 257 aa12.49□□□□□ -0.41
PSMC6-215ENST00000557517 FAM133AQ8N9E0 248 aa12.49□□□□□ -0.41
PSMC6-215ENST00000557517 DCAF4Q8WV16 495 aa12.49□□□□□ -0.41
PSMC6-215ENST00000557517 AGBL1Q96MI9 1066 aa12.49□□□□□ -0.41
PSMC6-215ENST00000557517 XPNPEP3Q9NQH7 507 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms