RNA–Protein interactions for RNA: ENST00000557418.1

FOXA1-205, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 392 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-205ENST00000557418 SEPT4O43236 478 aa24.75■■□□□ 1.55
FOXA1-205ENST00000557418 HABP4Q5JVS0 413 aaKnown RBP24.75■■□□□ 1.55
FOXA1-205ENST00000557418 CHST13Q8NET6 341 aa24.75■■□□□ 1.55
FOXA1-205ENST00000557418 DCAF4Q8WV16 495 aa24.75■■□□□ 1.55
FOXA1-205ENST00000557418 ESR2Q92731 530 aa24.75■■□□□ 1.55
FOXA1-205ENST00000557418 TTC14Q96N46 770 aa24.75■■□□□ 1.55
FOXA1-205ENST00000557418 TMEM47Q9BQJ4 181 aa24.75■■□□□ 1.55
FOXA1-205ENST00000557418 TINF2Q9BSI4 451 aa24.75■■□□□ 1.55
FOXA1-205ENST00000557418 FBXO40Q9UH90 709 aa24.75■■□□□ 1.55
FOXA1-205ENST00000557418 SMCHD1A6NHR9 2005 aa24.74■■□□□ 1.55
FOXA1-205ENST00000557418 RASEFQ8IZ41 740 aa24.74■■□□□ 1.55
FOXA1-205ENST00000557418 ANKRD35Q8N283 1001 aa24.74■■□□□ 1.55
FOXA1-205ENST00000557418 NRBP1Q9UHY1 535 aa24.74■■□□□ 1.55
FOXA1-205ENST00000557418 CCDC96Q2M329 555 aa24.73■■□□□ 1.55
FOXA1-205ENST00000557418 STOX1Q6ZVD7 989 aa24.73■■□□□ 1.55
FOXA1-205ENST00000557418 ARRDC4Q8NCT1 418 aa24.73■■□□□ 1.55
FOXA1-205ENST00000557418 PRR12Q9ULL5 1215 aa24.73■■□□□ 1.55
FOXA1-205ENST00000557418 COL6A1P12109 1028 aa24.72■■□□□ 1.55
FOXA1-205ENST00000557418 NT5C2P49902 561 aa24.72■■□□□ 1.55
FOXA1-205ENST00000557418 TSGA10IPQ3SY00 556 aa24.72■■□□□ 1.55
FOXA1-205ENST00000557418 ANO1Q5XXA6 986 aa24.72■■□□□ 1.55
FOXA1-205ENST00000557418 PFASO15067 1338 aa24.71■■□□□ 1.55
FOXA1-205ENST00000557418 DNAJC25-GNG10A0A024R161 153 aa24.71■■□□□ 1.55
FOXA1-205ENST00000557418 CHRDL2Q6WN34 429 aa24.71■■□□□ 1.55
FOXA1-205ENST00000557418 C7orf61Q8IZ16 206 aa24.71■■□□□ 1.55
FOXA1-205ENST00000557418 MSL3Q8N5Y2 521 aaKnown RBP24.71■■□□□ 1.55
FOXA1-205ENST00000557418 AGBL1Q96MI9 1066 aa24.71■■□□□ 1.55
FOXA1-205ENST00000557418 HOMER2Q9NSB8 354 aa24.71■■□□□ 1.55
FOXA1-205ENST00000557418 SNX14Q9Y5W7 946 aa24.71■■□□□ 1.55
FOXA1-205ENST00000557418 ALPK3Q96L96 1907 aa24.71■■□□□ 1.55
FOXA1-205ENST00000557418 NEDD4P46934 1319 aa24.7■■□□□ 1.54
FOXA1-205ENST00000557418 SNAP25P60880 206 aa24.7■■□□□ 1.54
FOXA1-205ENST00000557418 TKFCQ3LXA3 575 aa24.7■■□□□ 1.54
FOXA1-205ENST00000557418 RNF20Q5VTR2 975 aa24.7■■□□□ 1.54
FOXA1-205ENST00000557418 TTBK2Q6IQ55 1244 aa24.7■■□□□ 1.54
FOXA1-205ENST00000557418 CCDC174Q6PII3 467 aa24.7■■□□□ 1.54
FOXA1-205ENST00000557418 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.7■■□□□ 1.54
FOXA1-205ENST00000557418 SENP6Q9GZR1 1112 aaPredicted RBP24.7■■□□□ 1.54
FOXA1-205ENST00000557418 ACAD9Q9H845 621 aa24.7■■□□□ 1.54
FOXA1-205ENST00000557418 GPCPD1Q9NPB8 672 aa24.7■■□□□ 1.54
FOXA1-205ENST00000557418 CNPY2Q9Y2B0 182 aa24.7■■□□□ 1.54
FOXA1-205ENST00000557418 FRMPD3Q5JV73 1810 aa24.7■■□□□ 1.54
FOXA1-205ENST00000557418 ZNF536O15090 1300 aa24.69■■□□□ 1.54
FOXA1-205ENST00000557418 E7EWF7 191 aa24.69■■□□□ 1.54
FOXA1-205ENST00000557418 DNM1LO00429 736 aa24.69■■□□□ 1.54
FOXA1-205ENST00000557418 SLC34A2O95436 690 aa24.69■■□□□ 1.54
FOXA1-205ENST00000557418 MYCNP04198 464 aaPredicted RBP24.69■■□□□ 1.54
FOXA1-205ENST00000557418 CCDC178Q5BJE1 867 aa24.69■■□□□ 1.54
FOXA1-205ENST00000557418 GJC2Q5T442 439 aaPredicted RBP24.69■■□□□ 1.54
FOXA1-205ENST00000557418 RASGRP2Q7LDG7 609 aa24.69■■□□□ 1.54
FOXA1-205ENST00000557418 IQCA1Q86XH1 822 aa24.69■■□□□ 1.54
FOXA1-205ENST00000557418 IL17RAQ96F46 866 aa24.69■■□□□ 1.54
FOXA1-205ENST00000557418 TRERF1Q96PN7 1200 aa24.69■■□□□ 1.54
FOXA1-205ENST00000557418 ZKSCAN3Q9BRR0 538 aa24.69■■□□□ 1.54
FOXA1-205ENST00000557418 KDM4AO75164 1064 aa24.68■■□□□ 1.54
FOXA1-205ENST00000557418 ALAS1P13196 640 aa24.68■■□□□ 1.54
FOXA1-205ENST00000557418 SLC16A2P36021 539 aa24.68■■□□□ 1.54
FOXA1-205ENST00000557418 BTNL9Q6UXG8 535 aa24.68■■□□□ 1.54
FOXA1-205ENST00000557418 ZNF467Q7Z7K2 595 aaPredicted RBP24.68■■□□□ 1.54
FOXA1-205ENST00000557418 DGKHQ86XP1 1220 aa24.68■■□□□ 1.54
FOXA1-205ENST00000557418 RNF146Q9NTX7 359 aa24.68■■□□□ 1.54
FOXA1-205ENST00000557418 FRMPD2Q68DX3 1309 aaPredicted RBP24.67■■□□□ 1.54
FOXA1-205ENST00000557418 SYNGAP1Q96PV0 1343 aa24.67■■□□□ 1.54
FOXA1-205ENST00000557418 B4E1Z4 1266 aa24.67■■□□□ 1.54
FOXA1-205ENST00000557418 KBTBD13C9JR72 458 aa24.67■■□□□ 1.54
FOXA1-205ENST00000557418 RARBP10826 455 aa24.67■■□□□ 1.54
FOXA1-205ENST00000557418 PDHBP11177 359 aa24.67■■□□□ 1.54
FOXA1-205ENST00000557418 TAL1P17542 331 aaPredicted RBP24.67■■□□□ 1.54
FOXA1-205ENST00000557418 RBM25P49756 843 aaKnown RBP24.67■■□□□ 1.54
FOXA1-205ENST00000557418 COL9A3Q14050 684 aaPredicted RBP24.67■■□□□ 1.54
FOXA1-205ENST00000557418 ADCK5Q3MIX3 580 aa24.67■■□□□ 1.54
FOXA1-205ENST00000557418 SYDE2Q5VT97 1194 aa24.67■■□□□ 1.54
FOXA1-205ENST00000557418 MAMDC4Q6UXC1 1216 aa24.67■■□□□ 1.54
FOXA1-205ENST00000557418 C22orf23Q9BZE7 217 aa24.67■■□□□ 1.54
FOXA1-205ENST00000557418 KRT23Q9C075 422 aa24.67■■□□□ 1.54
FOXA1-205ENST00000557418 POTEB2H3BUK9 544 aa24.66■■□□□ 1.54
FOXA1-205ENST00000557418 SNAI1O95863 264 aaPredicted RBP24.66■■□□□ 1.54
FOXA1-205ENST00000557418 ZNF865P0CJ78 1059 aaPredicted RBP24.66■■□□□ 1.54
FOXA1-205ENST00000557418 LRRC26Q2I0M4 334 aa24.66■■□□□ 1.54
FOXA1-205ENST00000557418 CNNM2Q9H8M5 875 aa24.66■■□□□ 1.54
FOXA1-205ENST00000557418 ZSWIM5Q9P217 1185 aa24.66■■□□□ 1.54
FOXA1-205ENST00000557418 CCPG1Q9ULG6 757 aa24.66■■□□□ 1.54
FOXA1-205ENST00000557418 ZMYND8Q9ULU4 1186 aaPredicted RBP24.66■■□□□ 1.54
FOXA1-205ENST00000557418 ANAPC15P60006 121 aa24.65■■□□□ 1.54
FOXA1-205ENST00000557418 TBC1D32Q96NH3 1257 aa24.65■■□□□ 1.54
FOXA1-205ENST00000557418 RANBP17Q9H2T7 1088 aaKnown RBP24.65■■□□□ 1.54
FOXA1-205ENST00000557418 UPF2Q9HAU5 1272 aaKnown RBP24.65■■□□□ 1.54
FOXA1-205ENST00000557418 XPNPEP3Q9NQH7 507 aa24.65■■□□□ 1.54
FOXA1-205ENST00000557418 RBM27Q9P2N5 1060 aaKnown RBP24.65■■□□□ 1.54
FOXA1-205ENST00000557418 ICAM1P05362 532 aa24.64■■□□□ 1.54
FOXA1-205ENST00000557418 AKR1A1P14550 325 aa24.64■■□□□ 1.54
FOXA1-205ENST00000557418 ZNF543Q08ER8 600 aa24.64■■□□□ 1.54
FOXA1-205ENST00000557418 LRRC41Q15345 812 aa24.64■■□□□ 1.54
FOXA1-205ENST00000557418 ZSCAN10Q96SZ4 725 aaPredicted RBP24.64■■□□□ 1.54
FOXA1-205ENST00000557418 A1CFQ9NQ94 594 aaKnown RBP24.64■■□□□ 1.54
FOXA1-205ENST00000557418 FAM184BQ9ULE4 1060 aa24.64■■□□□ 1.54
FOXA1-205ENST00000557418 ATN1P54259 1190 aaPredicted RBP24.63■■□□□ 1.53
FOXA1-205ENST00000557418 CNTN2Q02246 1040 aa24.63■■□□□ 1.53
FOXA1-205ENST00000557418 ACVR2BQ13705 512 aa24.63■■□□□ 1.53
FOXA1-205ENST00000557418 KRT32Q14532 448 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms