RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 CD96P40200 585 aa5.94□□□□□ -1.46
CHD8-212ENST00000557329 NOP2P46087 812 aaKnown RBP5.94□□□□□ -1.46
CHD8-212ENST00000557329 ZNF143P52747 638 aaPredicted RBP5.94□□□□□ -1.46
CHD8-212ENST00000557329 ARID5AQ03989 594 aa5.94□□□□□ -1.46
CHD8-212ENST00000557329 SNX17Q15036 470 aa5.94□□□□□ -1.46
CHD8-212ENST00000557329 NR0B2Q15466 257 aa5.94□□□□□ -1.46
CHD8-212ENST00000557329 FBLN7Q53RD9 439 aa5.94□□□□□ -1.46
CHD8-212ENST00000557329 CWF19L1Q69YN2 538 aaKnown RBP5.94□□□□□ -1.46
CHD8-212ENST00000557329 SHDQ96IW2 340 aa5.94□□□□□ -1.46
CHD8-212ENST00000557329 GBP3Q9H0R5 595 aa5.94□□□□□ -1.46
CHD8-212ENST00000557329 ANTXR1Q9H6X2 564 aa5.94□□□□□ -1.46
CHD8-212ENST00000557329 CHST7Q9NS84 486 aa5.94□□□□□ -1.46
CHD8-212ENST00000557329 SLAMF8Q9P0V8 285 aa5.94□□□□□ -1.46
CHD8-212ENST00000557329 SF3B6Q9Y3B4 125 aaKnown RBP5.94□□□□□ -1.46
CHD8-212ENST00000557329 DENND4BO75064 1496 aaPredicted RBP5.94□□□□□ -1.46
CHD8-212ENST00000557329 FER1L4A9Z1Z3 1794 aa5.93□□□□□ -1.46
CHD8-212ENST00000557329 KIAA0556O60303 1618 aa5.93□□□□□ -1.46
CHD8-212ENST00000557329 DBX1A6NMT0 343 aa5.93□□□□□ -1.46
CHD8-212ENST00000557329 LRRN2O75325 713 aa5.93□□□□□ -1.46
CHD8-212ENST00000557329 ACRP10323 421 aa5.93□□□□□ -1.46
CHD8-212ENST00000557329 ITGA4P13612 1032 aa5.93□□□□□ -1.46
CHD8-212ENST00000557329 POLR2BP30876 1174 aaKnown RBP5.93□□□□□ -1.46
CHD8-212ENST00000557329 BMP8BP34820 402 aa5.93□□□□□ -1.46
CHD8-212ENST00000557329 KIR2DL1P43626 348 aaPredicted RBP5.93□□□□□ -1.46
CHD8-212ENST00000557329 KIR2DL2P43627 348 aaPredicted RBP5.93□□□□□ -1.46
CHD8-212ENST00000557329 SLC7A5Q01650 507 aa5.93□□□□□ -1.46
CHD8-212ENST00000557329 NCAPHQ15003 741 aa5.93□□□□□ -1.46
CHD8-212ENST00000557329 KCNMB1Q16558 191 aa5.93□□□□□ -1.46
CHD8-212ENST00000557329 NOL9Q5SY16 702 aaKnown RBP5.93□□□□□ -1.46
CHD8-212ENST00000557329 TTC6Q86TZ1 520 aa5.93□□□□□ -1.46
CHD8-212ENST00000557329 ZSWIM9Q86XI8 627 aa5.93□□□□□ -1.46
CHD8-212ENST00000557329 CRACR2BQ8N4Y2 399 aaPredicted RBP5.93□□□□□ -1.46
CHD8-212ENST00000557329 TCTN2Q96GX1 697 aa5.93□□□□□ -1.46
CHD8-212ENST00000557329 KIRREL1Q96J84 757 aa5.93□□□□□ -1.46
CHD8-212ENST00000557329 DSCC1Q9BVC3 393 aa5.93□□□□□ -1.46
CHD8-212ENST00000557329 PRDM14Q9GZV8 571 aa5.93□□□□□ -1.46
CHD8-212ENST00000557329 ADAMTS6Q9UKP5 1117 aa5.93□□□□□ -1.46
CHD8-212ENST00000557329 DIS3Q9Y2L1 958 aaKnown RBP5.93□□□□□ -1.46
CHD8-212ENST00000557329 STRCQ7RTU9 1775 aa5.93□□□□□ -1.46
CHD8-212ENST00000557329 PREX1Q8TCU6 1659 aa5.92□□□□□ -1.46
CHD8-212ENST00000557329 ZC3H6P61129 1189 aaKnown RBP5.92□□□□□ -1.46
CHD8-212ENST00000557329 TMEM67Q5HYA8 995 aa5.92□□□□□ -1.46
CHD8-212ENST00000557329 GMLQ99445 158 aa5.92□□□□□ -1.46
CHD8-212ENST00000557329 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.92□□□□□ -1.464e-9■□□□□ 10.9
CHD8-212ENST00000557329 CWC22Q9HCG8 908 aaKnown RBP5.92□□□□□ -1.46
CHD8-212ENST00000557329 IGSF5Q9NSI5 407 aa5.92□□□□□ -1.46
CHD8-212ENST00000557329 TCFL5Q9UL49 500 aa5.92□□□□□ -1.46
CHD8-212ENST00000557329 PCDHA11Q9Y5I1 949 aa5.92□□□□□ -1.46
CHD8-212ENST00000557329 FHOD1Q9Y613 1164 aa5.92□□□□□ -1.46
CHD8-212ENST00000557329 MED1Q15648 1581 aaPredicted RBP5.92□□□□□ -1.46
CHD8-212ENST00000557329 PTPRTO14522 1441 aa5.91□□□□□ -1.46
CHD8-212ENST00000557329 NEO1Q92859 1461 aa5.91□□□□□ -1.46
CHD8-212ENST00000557329 PPM1BO75688 479 aa5.91□□□□□ -1.46
CHD8-212ENST00000557329 PRAMEF1O95521 474 aa5.91□□□□□ -1.46
CHD8-212ENST00000557329 HPXP02790 462 aa5.91□□□□□ -1.46
CHD8-212ENST00000557329 GLI1P08151 1106 aa5.91□□□□□ -1.46
CHD8-212ENST00000557329 CD247P20963 164 aa5.91□□□□□ -1.46
CHD8-212ENST00000557329 GNPTABQ3T906 1256 aa5.91□□□□□ -1.46
CHD8-212ENST00000557329 ZNF648Q5T619 568 aaPredicted RBP5.91□□□□□ -1.46
CHD8-212ENST00000557329 HEATR6Q6AI08 1181 aaKnown RBP5.91□□□□□ -1.46
CHD8-212ENST00000557329 CCDC81Q6ZN84 652 aa5.91□□□□□ -1.46
CHD8-212ENST00000557329 USHBP1Q8N6Y0 703 aa5.91□□□□□ -1.46
CHD8-212ENST00000557329 ABHD4Q8TB40 342 aa5.91□□□□□ -1.46
CHD8-212ENST00000557329 MYLIPQ8WY64 445 aa5.91□□□□□ -1.46
CHD8-212ENST00000557329 FAM168AQ92567 244 aa5.91□□□□□ -1.46
CHD8-212ENST00000557329 WHRNQ9P202 907 aa5.91□□□□□ -1.46
CHD8-212ENST00000557329 TNFRSF10DQ9UBN6 386 aa5.91□□□□□ -1.46
CHD8-212ENST00000557329 ZNF281Q9Y2X9 895 aa5.91□□□□□ -1.46
CHD8-212ENST00000557329 R3HCC1Q9Y3T6 440 aaKnown RBP5.91□□□□□ -1.46
CHD8-212ENST00000557329 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.91□□□□□ -1.46
CHD8-212ENST00000557329 ATP10BO94823 1461 aa5.9□□□□□ -1.46
CHD8-212ENST00000557329 GOLGA3Q08378 1498 aa5.9□□□□□ -1.46
CHD8-212ENST00000557329 RAPGEF2Q9Y4G8 1499 aa5.9□□□□□ -1.46
CHD8-212ENST00000557329 ZFYVE16Q7Z3T8 1539 aa5.9□□□□□ -1.46
CHD8-212ENST00000557329 UGGT2Q9NYU1 1516 aa5.9□□□□□ -1.46
CHD8-212ENST00000557329 A0A1W2PQH9 124 aa5.9□□□□□ -1.46
CHD8-212ENST00000557329 SHISA3A0PJX4 238 aa5.9□□□□□ -1.46
CHD8-212ENST00000557329 POU4F1Q01851 419 aa5.9□□□□□ -1.46
CHD8-212ENST00000557329 TEKQ02763 1124 aa5.9□□□□□ -1.46
CHD8-212ENST00000557329 PPP2R5EQ16537 467 aa5.9□□□□□ -1.46
CHD8-212ENST00000557329 SPOCD1Q6ZMY3 1216 aa5.9□□□□□ -1.46
CHD8-212ENST00000557329 FCRL2Q96LA5 508 aaPredicted RBP5.9□□□□□ -1.46
CHD8-212ENST00000557329 GP6Q9HCN6 339 aa5.9□□□□□ -1.46
CHD8-212ENST00000557329 ARHGEF40Q8TER5 1519 aa5.89□□□□□ -1.47
CHD8-212ENST00000557329 FARP2O94887 1054 aaPredicted RBP5.89□□□□□ -1.47
CHD8-212ENST00000557329 SYPP08247 313 aa5.89□□□□□ -1.47
CHD8-212ENST00000557329 ZGLP1P0C6A0 271 aa5.89□□□□□ -1.47
CHD8-212ENST00000557329 RPL10P27635 214 aaKnown RBP5.89□□□□□ -1.47
CHD8-212ENST00000557329 POMZP3Q6PJE2 187 aa5.89□□□□□ -1.47
CHD8-212ENST00000557329 CYP2R1Q6VVX0 501 aa5.89□□□□□ -1.47
CHD8-212ENST00000557329 TMC3Q7Z5M5 1100 aa5.89□□□□□ -1.47
CHD8-212ENST00000557329 BHLHE22Q8NFJ8 381 aaPredicted RBP5.89□□□□□ -1.47
CHD8-212ENST00000557329 RCC1LQ96I51 464 aaKnown RBP5.89□□□□□ -1.47
CHD8-212ENST00000557329 ZNF512BQ96KM6 892 aaPredicted RBP5.89□□□□□ -1.47
CHD8-212ENST00000557329 C8orf37Q96NL8 207 aa5.89□□□□□ -1.47
CHD8-212ENST00000557329 TINF2Q9BSI4 451 aa5.89□□□□□ -1.47
CHD8-212ENST00000557329 KRTAP4-11Q9BYQ6 195 aa5.89□□□□□ -1.47
CHD8-212ENST00000557329 PRDM7Q9NQW5 492 aa5.89□□□□□ -1.47
CHD8-212ENST00000557329 PRKAG3Q9UGI9 489 aa5.89□□□□□ -1.47
CHD8-212ENST00000557329 ZMYM5Q9UJ78 669 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms