RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 SRRDQ9UH36 339 aa24.37■■□□□ 1.49
SEC23A-213ENST00000557280 HTTP42858 3142 aa24.37■■□□□ 1.49
SEC23A-213ENST00000557280 ZBTB43O43298 467 aa24.36■■□□□ 1.49
SEC23A-213ENST00000557280 FDX1P10109 184 aa24.36■■□□□ 1.49
SEC23A-213ENST00000557280 OAZ1P54368 228 aa24.36■■□□□ 1.49
SEC23A-213ENST00000557280 CDC37Q16543 378 aaPredicted RBP24.36■■□□□ 1.49
SEC23A-213ENST00000557280 PLEKHH3Q7Z736 793 aa24.36■■□□□ 1.49
SEC23A-213ENST00000557280 CCAR1Q8IX12 1150 aaKnown RBP24.36■■□□□ 1.49
SEC23A-213ENST00000557280 HOMER2Q9NSB8 354 aa24.36■■□□□ 1.49
SEC23A-213ENST00000557280 NAP1L2Q9ULW6 460 aaPredicted RBP24.36■■□□□ 1.49
SEC23A-213ENST00000557280 HPS5Q9UPZ3 1129 aa24.36■■□□□ 1.49
SEC23A-213ENST00000557280 PTPN22Q9Y2R2 807 aa24.36■■□□□ 1.49
SEC23A-213ENST00000557280 DOCK3Q8IZD9 2030 aa24.35■■□□□ 1.49
SEC23A-213ENST00000557280 DHX16O60231 1041 aaKnown RBP24.35■■□□□ 1.49
SEC23A-213ENST00000557280 CALM1P0DP23 149 aa24.35■■□□□ 1.49
SEC23A-213ENST00000557280 CALM2P0DP24 149 aa24.35■■□□□ 1.49
SEC23A-213ENST00000557280 CALM3P0DP25 149 aa24.35■■□□□ 1.49
SEC23A-213ENST00000557280 FANCBQ8NB91 859 aa24.35■■□□□ 1.49
SEC23A-213ENST00000557280 COA7Q96BR5 231 aa24.35■■□□□ 1.49
SEC23A-213ENST00000557280 MCOLN1Q9GZU1 580 aa24.35■■□□□ 1.49
SEC23A-213ENST00000557280 FAM217BQ9NTX9 383 aaPredicted RBP24.35■■□□□ 1.49
SEC23A-213ENST00000557280 GJD2Q9UKL4 321 aa24.35■■□□□ 1.49
SEC23A-213ENST00000557280 PTCH2Q9Y6C5 1203 aa24.35■■□□□ 1.49
SEC23A-213ENST00000557280 GOLGA8AA7E2F4 631 aa24.34■■□□□ 1.49
SEC23A-213ENST00000557280 SLC25A27O95847 323 aa24.34■■□□□ 1.49
SEC23A-213ENST00000557280 ICAM1P05362 532 aa24.34■■□□□ 1.49
SEC23A-213ENST00000557280 KIF5BP33176 963 aa24.34■■□□□ 1.49
SEC23A-213ENST00000557280 FLT3LGP49771 235 aa24.34■■□□□ 1.49
SEC23A-213ENST00000557280 QRICH1Q2TAL8 776 aa24.34■■□□□ 1.49
SEC23A-213ENST00000557280 MORN1Q5T089 497 aa24.34■■□□□ 1.49
SEC23A-213ENST00000557280 SYNE3Q6ZMZ3 975 aa24.34■■□□□ 1.49
SEC23A-213ENST00000557280 SRBD1Q8N5C6 995 aaKnown RBP24.34■■□□□ 1.49
SEC23A-213ENST00000557280 MTMR8Q96EF0 704 aa24.34■■□□□ 1.49
SEC23A-213ENST00000557280 MROH8Q9H579 483 aa24.34■■□□□ 1.49
SEC23A-213ENST00000557280 CWC22Q9HCG8 908 aaKnown RBP24.34■■□□□ 1.49
SEC23A-213ENST00000557280 CCPG1Q9ULG6 757 aa24.34■■□□□ 1.49
SEC23A-213ENST00000557280 PPP1R11O60927 126 aaPredicted RBP24.33■■□□□ 1.49
SEC23A-213ENST00000557280 GNRH1P01148 92 aa24.33■■□□□ 1.49
SEC23A-213ENST00000557280 PTPREP23469 700 aa24.33■■□□□ 1.49
SEC23A-213ENST00000557280 CDC27P30260 824 aa24.33■■□□□ 1.49
SEC23A-213ENST00000557280 AK2P54819 239 aa24.33■■□□□ 1.49
SEC23A-213ENST00000557280 GRB14Q14449 540 aa24.33■■□□□ 1.49
SEC23A-213ENST00000557280 ARHGEF6Q15052 776 aa24.33■■□□□ 1.49
SEC23A-213ENST00000557280 RTN1Q16799 776 aa24.33■■□□□ 1.49
SEC23A-213ENST00000557280 TMTC3Q6ZXV5 915 aa24.33■■□□□ 1.49
SEC23A-213ENST00000557280 TBC1D32Q96NH3 1257 aa24.33■■□□□ 1.49
SEC23A-213ENST00000557280 PIGSQ96S52 555 aa24.33■■□□□ 1.49
SEC23A-213ENST00000557280 RIOX1Q9H6W3 641 aa24.33■■□□□ 1.49
SEC23A-213ENST00000557280 SMCHD1A6NHR9 2005 aa24.33■■□□□ 1.49
SEC23A-213ENST00000557280 NID2Q14112 1375 aa24.32■■□□□ 1.48
SEC23A-213ENST00000557280 ALAS1P13196 640 aa24.32■■□□□ 1.48
SEC23A-213ENST00000557280 EVCP57679 992 aa24.32■■□□□ 1.48
SEC23A-213ENST00000557280 MUM1L1Q5H9M0 696 aa24.32■■□□□ 1.48
SEC23A-213ENST00000557280 HOMER1Q86YM7 354 aa24.32■■□□□ 1.48
SEC23A-213ENST00000557280 PIBF1Q8WXW3 757 aa24.32■■□□□ 1.48
SEC23A-213ENST00000557280 USP6NLQ92738 828 aa24.32■■□□□ 1.48
SEC23A-213ENST00000557280 RNF146Q9NTX7 359 aa24.32■■□□□ 1.48
SEC23A-213ENST00000557280 ZNF236Q9UL36 1845 aa24.32■■□□□ 1.48
SEC23A-213ENST00000557280 HOXD10P28358 340 aa24.31■■□□□ 1.48
SEC23A-213ENST00000557280 PDIA3P30101 505 aaKnown RBP24.31■■□□□ 1.48
SEC23A-213ENST00000557280 METAP2P50579 478 aaKnown RBP eCLIP24.31■■□□□ 1.48
SEC23A-213ENST00000557280 NEK4P51957 841 aa24.31■■□□□ 1.48
SEC23A-213ENST00000557280 USH1GQ495M9 461 aa24.31■■□□□ 1.48
SEC23A-213ENST00000557280 CCDC82Q8N4S0 544 aa24.31■■□□□ 1.48
SEC23A-213ENST00000557280 SPZ1Q9BXG8 430 aa24.31■■□□□ 1.48
SEC23A-213ENST00000557280 UPF2Q9HAU5 1272 aaKnown RBP24.31■■□□□ 1.48
SEC23A-213ENST00000557280 SLC15A5A6NIM6 579 aa24.3■■□□□ 1.48
SEC23A-213ENST00000557280 ADORA2AP29274 412 aa24.3■■□□□ 1.48
SEC23A-213ENST00000557280 COPB2P35606 906 aa24.3■■□□□ 1.48
SEC23A-213ENST00000557280 RCAN1P53805 252 aa24.3■■□□□ 1.48
SEC23A-213ENST00000557280 FUT2Q10981 343 aa24.3■■□□□ 1.48
SEC23A-213ENST00000557280 FBXO46Q6PJ61 603 aaPredicted RBP24.3■■□□□ 1.48
SEC23A-213ENST00000557280 NOL8Q76FK4 1167 aaKnown RBP24.3■■□□□ 1.48
SEC23A-213ENST00000557280 SOCS4Q8WXH5 440 aa24.3■■□□□ 1.48
SEC23A-213ENST00000557280 TRERF1Q96PN7 1200 aa24.3■■□□□ 1.48
SEC23A-213ENST00000557280 MMP19Q99542 508 aa24.3■■□□□ 1.48
SEC23A-213ENST00000557280 NUDT12Q9BQG2 462 aa24.3■■□□□ 1.48
SEC23A-213ENST00000557280 ALDH8A1Q9H2A2 487 aaPredicted RBP24.3■■□□□ 1.48
SEC23A-213ENST00000557280 NCOA5Q9HCD5 579 aaKnown RBP24.3■■□□□ 1.48
SEC23A-213ENST00000557280 TPCN1Q9ULQ1 816 aa24.3■■□□□ 1.48
SEC23A-213ENST00000557280 IVNS1ABPQ9Y6Y0 642 aa24.3■■□□□ 1.48
SEC23A-213ENST00000557280 CNTNAP5Q8WYK1 1306 aa24.3■■□□□ 1.48
SEC23A-213ENST00000557280 BAZ2BQ9UIF8 2168 aaKnown RBP24.29■■□□□ 1.48
SEC23A-213ENST00000557280 hCG_1642624A0A1W2PR95 340 aa24.29■■□□□ 1.48
SEC23A-213ENST00000557280 ZBTB5O15062 677 aa24.29■■□□□ 1.48
SEC23A-213ENST00000557280 COBLO75128 1261 aa24.29■■□□□ 1.48
SEC23A-213ENST00000557280 CYP2B6P20813 491 aa24.29■■□□□ 1.48
SEC23A-213ENST00000557280 ADD1P35611 737 aaKnown RBP24.29■■□□□ 1.48
SEC23A-213ENST00000557280 LZTS2Q9BRK4 669 aa24.29■■□□□ 1.48
SEC23A-213ENST00000557280 RBM28Q9NW13 759 aaKnown RBP24.29■■□□□ 1.48
SEC23A-213ENST00000557280 NFIBO00712 420 aa24.28■■□□□ 1.48
SEC23A-213ENST00000557280 PGK2P07205 417 aa24.28■■□□□ 1.48
SEC23A-213ENST00000557280 FCER1AP12319 257 aa24.28■■□□□ 1.48
SEC23A-213ENST00000557280 GNAQP50148 359 aa24.28■■□□□ 1.48
SEC23A-213ENST00000557280 PRMT2P55345 433 aa24.28■■□□□ 1.48
SEC23A-213ENST00000557280 CCT2P78371 535 aaKnown RBP24.28■■□□□ 1.48
SEC23A-213ENST00000557280 MAP2K5Q13163 448 aa24.28■■□□□ 1.48
SEC23A-213ENST00000557280 STK3Q13188 491 aa24.28■■□□□ 1.48
SEC23A-213ENST00000557280 PKN2Q16513 984 aaKnown RBP24.28■■□□□ 1.48
SEC23A-213ENST00000557280 CHST13Q8NET6 341 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms