RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 IVNS1ABPQ9Y6Y0 642 aa10.5□□□□□ -0.73
VRK1-206ENST00000557222 MYO5AQ9Y4I1 1855 aaKnown RBP10.49□□□□□ -0.73
VRK1-206ENST00000557222 PEX10O60683 326 aa10.49□□□□□ -0.73
VRK1-206ENST00000557222 LILRB3O75022 631 aa10.49□□□□□ -0.73
VRK1-206ENST00000557222 AVPP01185 164 aa10.49□□□□□ -0.73
VRK1-206ENST00000557222 SHMT1P34896 483 aa10.49□□□□□ -0.73
VRK1-206ENST00000557222 ATP2B2Q01814 1243 aa10.49□□□□□ -0.73
VRK1-206ENST00000557222 COG2Q14746 738 aa10.49□□□□□ -0.73
VRK1-206ENST00000557222 OLFML2BQ68BL8 750 aa10.49□□□□□ -0.73
VRK1-206ENST00000557222 CEP85Q6P2H3 762 aa10.49□□□□□ -0.73
VRK1-206ENST00000557222 ITPRIPQ8IWB1 547 aa10.49□□□□□ -0.73
VRK1-206ENST00000557222 DEFB123Q8N688 67 aa10.49□□□□□ -0.73
VRK1-206ENST00000557222 MB21D1Q8N884 522 aa10.49□□□□□ -0.73
VRK1-206ENST00000557222 SHCBP1Q8NEM2 672 aa10.49□□□□□ -0.73
VRK1-206ENST00000557222 CRNKL1Q9BZJ0 848 aaKnown RBP10.49□□□□□ -0.73
VRK1-206ENST00000557222 DDX20Q9UHI6 824 aaKnown RBP10.49□□□□□ -0.73
VRK1-206ENST00000557222 STXBP5LQ9Y2K9 1186 aa10.49□□□□□ -0.73
VRK1-206ENST00000557222 MAGEB6P1A0A0J9YX57 407 aa10.48□□□□□ -0.73
VRK1-206ENST00000557222 DNM1LO00429 736 aa10.48□□□□□ -0.73
VRK1-206ENST00000557222 DLL1O00548 723 aa10.48□□□□□ -0.73
VRK1-206ENST00000557222 ST8SIA5O15466 376 aa10.48□□□□□ -0.73
VRK1-206ENST00000557222 POLR3DP05423 398 aaPredicted RBP10.48□□□□□ -0.73
VRK1-206ENST00000557222 SMPD1P17405 629 aa10.48□□□□□ -0.73
VRK1-206ENST00000557222 SYN1P17600 705 aa10.48□□□□□ -0.73
VRK1-206ENST00000557222 GUCY1A2P33402 732 aa10.48□□□□□ -0.73
VRK1-206ENST00000557222 CLK2P49760 499 aaKnown RBP10.48□□□□□ -0.73
VRK1-206ENST00000557222 PLCD1P51178 756 aa10.48□□□□□ -0.73
VRK1-206ENST00000557222 LRRC26Q2I0M4 334 aa10.48□□□□□ -0.73
VRK1-206ENST00000557222 ZNF787Q6DD87 383 aa10.48□□□□□ -0.73
VRK1-206ENST00000557222 FAM109BQ6ICB4 259 aaPredicted RBP10.48□□□□□ -0.73
VRK1-206ENST00000557222 AACSQ86V21 672 aa10.48□□□□□ -0.73
VRK1-206ENST00000557222 ABRAQ8N0Z2 381 aa10.48□□□□□ -0.73
VRK1-206ENST00000557222 ACER1Q8TDN7 264 aa10.48□□□□□ -0.73
VRK1-206ENST00000557222 RPAP3Q9H6T3 665 aaPredicted RBP10.48□□□□□ -0.73
VRK1-206ENST00000557222 ANTXR1Q9H6X2 564 aa10.48□□□□□ -0.73
VRK1-206ENST00000557222 C1orf115Q9H7X2 142 aa10.48□□□□□ -0.73
VRK1-206ENST00000557222 AAASQ9NRG9 546 aa10.48□□□□□ -0.73
VRK1-206ENST00000557222 POLR3EQ9NVU0 708 aa10.48□□□□□ -0.73
VRK1-206ENST00000557222 SLC5A4Q9NY91 659 aa10.48□□□□□ -0.73
VRK1-206ENST00000557222 BTBD7Q9P203 1132 aa10.48□□□□□ -0.73
VRK1-206ENST00000557222 SWAP70Q9UH65 585 aa10.48□□□□□ -0.73
VRK1-206ENST00000557222 J3QL48 77 aa10.47□□□□□ -0.73
VRK1-206ENST00000557222 RLBP1P12271 317 aa10.47□□□□□ -0.73
VRK1-206ENST00000557222 SH3BP2P78314 561 aa10.47□□□□□ -0.73
VRK1-206ENST00000557222 ZYXQ15942 572 aaKnown RBP10.47□□□□□ -0.73
VRK1-206ENST00000557222 SLC9C2Q5TAH2 1124 aa10.47□□□□□ -0.73
VRK1-206ENST00000557222 TMEM179Q6ZVK1 233 aa10.47□□□□□ -0.73
VRK1-206ENST00000557222 ARRDC4Q8NCT1 418 aa10.47□□□□□ -0.73
VRK1-206ENST00000557222 FAM117AQ9C073 453 aa10.47□□□□□ -0.73
VRK1-206ENST00000557222 MTMR10Q9NXD2 777 aa10.47□□□□□ -0.73
VRK1-206ENST00000557222 MCM9Q9NXL9 1143 aa10.47□□□□□ -0.73
VRK1-206ENST00000557222 FLRT1Q9NZU1 646 aa10.47□□□□□ -0.73
VRK1-206ENST00000557222 CYBAP13498 195 aa10.46□□□□□ -0.73
VRK1-206ENST00000557222 PDE6AP16499 860 aa10.46□□□□□ -0.73
VRK1-206ENST00000557222 SEPT2Q15019 361 aa10.46□□□□□ -0.73
VRK1-206ENST00000557222 WDR78Q5VTH9 848 aa10.46□□□□□ -0.73
VRK1-206ENST00000557222 DPP9Q86TI2 863 aa10.46□□□□□ -0.73
VRK1-206ENST00000557222 RPAP2Q8IXW5 612 aaPredicted RBP10.46□□□□□ -0.73
VRK1-206ENST00000557222 CRIPAKQ8N1N5 446 aa10.46□□□□□ -0.73
VRK1-206ENST00000557222 CLASRPQ8N2M8 674 aaKnown RBP10.46□□□□□ -0.73
VRK1-206ENST00000557222 NPLOC4Q8TAT6 608 aa10.46□□□□□ -0.73
VRK1-206ENST00000557222 RHPN1Q8TCX5 695 aa10.46□□□□□ -0.73
VRK1-206ENST00000557222 BAP1Q92560 729 aa10.46□□□□□ -0.73
VRK1-206ENST00000557222 KIF1BPQ96EK5 621 aa10.46□□□□□ -0.73
VRK1-206ENST00000557222 CCDC17Q96LX7 622 aa10.46□□□□□ -0.73
VRK1-206ENST00000557222 LBHD1Q9BQE6 289 aaPredicted RBP10.46□□□□□ -0.73
VRK1-206ENST00000557222 MOV10L1Q9BXT6 1211 aaKnown RBP10.46□□□□□ -0.73
VRK1-206ENST00000557222 SENP6Q9GZR1 1112 aaPredicted RBP10.46□□□□□ -0.73
VRK1-206ENST00000557222 SPATC1LQ9H0A9 340 aa10.46□□□□□ -0.73
VRK1-206ENST00000557222 MROH8Q9H579 483 aa10.46□□□□□ -0.73
VRK1-206ENST00000557222 SH2D4AQ9H788 454 aa10.46□□□□□ -0.73
VRK1-206ENST00000557222 ATP8A2Q9NTI2 1148 aa10.46□□□□□ -0.73
VRK1-206ENST00000557222 NRBP1Q9UHY1 535 aa10.46□□□□□ -0.73
VRK1-206ENST00000557222 EXOC6BQ9Y2D4 811 aa10.46□□□□□ -0.73
VRK1-206ENST00000557222 A0A1W2PRG0 241 aa10.45□□□□□ -0.74
VRK1-206ENST00000557222 TCRBV5S4A2TA0A5A2 114 aa10.45□□□□□ -0.74
VRK1-206ENST00000557222 SEPT4O43236 478 aa10.45□□□□□ -0.74
VRK1-206ENST00000557222 RAB11FIP3O75154 756 aa10.45□□□□□ -0.74
VRK1-206ENST00000557222 HMMRO75330 724 aa10.45□□□□□ -0.74
VRK1-206ENST00000557222 ADORA2AP29274 412 aa10.45□□□□□ -0.74
VRK1-206ENST00000557222 CNGA1P29973 690 aa10.45□□□□□ -0.74
VRK1-206ENST00000557222 CTHP32929 405 aa10.45□□□□□ -0.74
VRK1-206ENST00000557222 LINC01559Q495D7 138 aa10.45□□□□□ -0.74
VRK1-206ENST00000557222 C1orf53Q5VUE5 145 aa10.45□□□□□ -0.74
VRK1-206ENST00000557222 CHMP4BQ9H444 224 aaKnown RBP10.45□□□□□ -0.74
VRK1-206ENST00000557222 ARHGEF10LQ9HCE6 1279 aa10.45□□□□□ -0.74
VRK1-206ENST00000557222 DCP1AQ9NPI6 582 aaPredicted RBP10.45□□□□□ -0.74
VRK1-206ENST00000557222 PRKAG2Q9UGJ0 569 aa10.45□□□□□ -0.74
VRK1-206ENST00000557222 TMX2Q9Y320 296 aa10.45□□□□□ -0.74
VRK1-206ENST00000557222 NDUFB9Q9Y6M9 179 aa10.45□□□□□ -0.74
VRK1-206ENST00000557222 UNC80Q8N2C7 3258 aa10.45□□□□□ -0.74
VRK1-206ENST00000557222 ZNF236Q9UL36 1845 aa10.44□□□□□ -0.74
VRK1-206ENST00000557222 ZNF532Q9HCE3 1301 aa10.44□□□□□ -0.74
VRK1-206ENST00000557222 MPHOSPH10O00566 681 aaKnown RBP10.44□□□□□ -0.74
VRK1-206ENST00000557222 SLC25A27O95847 323 aa10.44□□□□□ -0.74
VRK1-206ENST00000557222 F12P00748 615 aaPredicted RBP10.44□□□□□ -0.74
VRK1-206ENST00000557222 IFIT2P09913 472 aaKnown RBP10.44□□□□□ -0.74
VRK1-206ENST00000557222 ERCC3P19447 782 aa10.44□□□□□ -0.74
VRK1-206ENST00000557222 CYP2C19P33261 490 aa10.44□□□□□ -0.74
VRK1-206ENST00000557222 EHBP1Q8NDI1 1231 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms