RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 OAZ1P54368 228 aa12.77□□□□□ -0.37
HNRNPC-230ENST00000557201 NKX3-2P78367 333 aa12.77□□□□□ -0.37
HNRNPC-230ENST00000557201 ACVR2BQ13705 512 aa12.77□□□□□ -0.37
HNRNPC-230ENST00000557201 KCNA10Q16322 511 aa12.77□□□□□ -0.37
HNRNPC-230ENST00000557201 CPXCR1Q8N123 301 aa12.77□□□□□ -0.37
HNRNPC-230ENST00000557201 CHST13Q8NET6 341 aa12.77□□□□□ -0.37
HNRNPC-230ENST00000557201 NEDD1Q8NHV4 660 aa12.77□□□□□ -0.37
HNRNPC-230ENST00000557201 KIFC2Q96AC6 838 aa12.77□□□□□ -0.37
HNRNPC-230ENST00000557201 DDX11Q96FC9 970 aa12.77□□□□□ -0.37
HNRNPC-230ENST00000557201 UPF3AQ9H1J1 476 aaKnown RBP12.77□□□□□ -0.37
HNRNPC-230ENST00000557201 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.77□□□□□ -0.37
HNRNPC-230ENST00000557201 TBX21Q9UL17 535 aa12.77□□□□□ -0.37
HNRNPC-230ENST00000557201 SPTBN5Q9NRC6 3674 aaKnown RBP12.77□□□□□ -0.37
HNRNPC-230ENST00000557201 PRUNE2Q8WUY3 3088 aa12.76□□□□□ -0.37
HNRNPC-230ENST00000557201 ELP1O95163 1332 aa12.76□□□□□ -0.37
HNRNPC-230ENST00000557201 TMEM265A0A087WTH1 108 aa12.76□□□□□ -0.37
HNRNPC-230ENST00000557201 RAG1P15918 1043 aa12.76□□□□□ -0.37
HNRNPC-230ENST00000557201 TDO2P48775 406 aa12.76□□□□□ -0.37
HNRNPC-230ENST00000557201 GJA9P57773 515 aa12.76□□□□□ -0.37
HNRNPC-230ENST00000557201 ZNF444Q8N0Y2 327 aaPredicted RBP12.76□□□□□ -0.37
HNRNPC-230ENST00000557201 LRRC47Q8N1G4 583 aaKnown RBP12.76□□□□□ -0.37
HNRNPC-230ENST00000557201 PI4K2BQ8TCG2 481 aa12.76□□□□□ -0.37
HNRNPC-230ENST00000557201 NUP133Q8WUM0 1156 aa12.76□□□□□ -0.37
HNRNPC-230ENST00000557201 GPATCH3Q96I76 525 aa12.76□□□□□ -0.37
HNRNPC-230ENST00000557201 SEC62Q99442 399 aaKnown RBP12.76□□□□□ -0.37
HNRNPC-230ENST00000557201 ABHD16BQ9H3Z7 469 aa12.76□□□□□ -0.37
HNRNPC-230ENST00000557201 ZNF287Q9HBT7 754 aa12.76□□□□□ -0.37
HNRNPC-230ENST00000557201 STARD7Q9NQZ5 370 aa12.76□□□□□ -0.37
HNRNPC-230ENST00000557201 TMEM39AQ9NV64 488 aa12.76□□□□□ -0.37
HNRNPC-230ENST00000557201 ZHX1Q9UKY1 873 aaPredicted RBP12.76□□□□□ -0.37
HNRNPC-230ENST00000557201 MYH4Q9Y623 1939 aa12.76□□□□□ -0.37
HNRNPC-230ENST00000557201 ZNF536O15090 1300 aa12.75□□□□□ -0.37
HNRNPC-230ENST00000557201 FOXP2O15409 715 aa12.75□□□□□ -0.37
HNRNPC-230ENST00000557201 TIMP1P01033 207 aa12.75□□□□□ -0.37
HNRNPC-230ENST00000557201 FPGSQ05932 587 aa12.75□□□□□ -0.37
HNRNPC-230ENST00000557201 ZMYM1Q5SVZ6 1142 aa12.75□□□□□ -0.37
HNRNPC-230ENST00000557201 SLFN13Q68D06 897 aa12.75□□□□□ -0.37
HNRNPC-230ENST00000557201 ARMCX2Q7L311 632 aa12.75□□□□□ -0.37
HNRNPC-230ENST00000557201 FAM133AQ8N9E0 248 aa12.75□□□□□ -0.37
HNRNPC-230ENST00000557201 RNPC3Q96LT9 517 aaKnown RBP12.75□□□□□ -0.37
HNRNPC-230ENST00000557201 FBXO40Q9UH90 709 aa12.75□□□□□ -0.37
HNRNPC-230ENST00000557201 CUL9Q8IWT3 2517 aa12.75□□□□□ -0.37
HNRNPC-230ENST00000557201 TTC41PQ6P2S7 1318 aa12.74□□□□□ -0.37
HNRNPC-230ENST00000557201 DCDC2CA8MYV0 355 aa12.74□□□□□ -0.37
HNRNPC-230ENST00000557201 FDX1P10109 184 aa12.74□□□□□ -0.37
HNRNPC-230ENST00000557201 BMP3P12645 472 aa12.74□□□□□ -0.37
HNRNPC-230ENST00000557201 CNTN2Q02246 1040 aa12.74□□□□□ -0.37
HNRNPC-230ENST00000557201 CCDC144BQ3MJ40 725 aa12.74□□□□□ -0.37
HNRNPC-230ENST00000557201 C16orf59Q7L2K0 433 aa12.74□□□□□ -0.37
HNRNPC-230ENST00000557201 CCDC144CPQ8IYA2 1237 aa12.74□□□□□ -0.37
HNRNPC-230ENST00000557201 ANKRD35Q8N283 1001 aa12.74□□□□□ -0.37
HNRNPC-230ENST00000557201 MAFAQ8NHW3 353 aaPredicted RBP12.74□□□□□ -0.37
HNRNPC-230ENST00000557201 OTUD7AQ8TE49 926 aaPredicted RBP12.74□□□□□ -0.37
HNRNPC-230ENST00000557201 MYLIPQ8WY64 445 aa12.74□□□□□ -0.37
HNRNPC-230ENST00000557201 GMCL1Q96IK5 515 aa12.74□□□□□ -0.37
HNRNPC-230ENST00000557201 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.74□□□□□ -0.37
HNRNPC-230ENST00000557201 ASTN1O14525 1302 aa12.73□□□□□ -0.37
HNRNPC-230ENST00000557201 PLA2G6O60733 806 aa12.73□□□□□ -0.37
HNRNPC-230ENST00000557201 APPP05067 770 aa12.73□□□□□ -0.37
HNRNPC-230ENST00000557201 ASGR1P07306 291 aa12.73□□□□□ -0.37
HNRNPC-230ENST00000557201 C6orf222P0C671 652 aaPredicted RBP12.73□□□□□ -0.37
HNRNPC-230ENST00000557201 NOVP48745 357 aa12.73□□□□□ -0.37
HNRNPC-230ENST00000557201 TFAP4Q01664 338 aa12.73□□□□□ -0.37
HNRNPC-230ENST00000557201 PPARAQ07869 468 aa12.73□□□□□ -0.37
HNRNPC-230ENST00000557201 RASIP1Q5U651 963 aa12.73□□□□□ -0.37
HNRNPC-230ENST00000557201 MFSD5Q6N075 450 aa12.73□□□□□ -0.37
HNRNPC-230ENST00000557201 PCSK9Q8NBP7 692 aaKnown RBP12.73□□□□□ -0.37
HNRNPC-230ENST00000557201 GLT1D1Q96MS3 346 aa12.73□□□□□ -0.37
HNRNPC-230ENST00000557201 IL17RBQ9NRM6 502 aa12.73□□□□□ -0.37
HNRNPC-230ENST00000557201 MCM3APO60318 1980 aa12.73□□□□□ -0.37
HNRNPC-230ENST00000557201 MROH7Q68CQ1 1323 aa12.72□□□□□ -0.37
HNRNPC-230ENST00000557201 SALL3Q9BXA9 1300 aa12.72□□□□□ -0.37
HNRNPC-230ENST00000557201 SOWAHBA6NEL2 793 aa12.72□□□□□ -0.37
HNRNPC-230ENST00000557201 TMEM232C9JQI7 657 aa12.72□□□□□ -0.37
HNRNPC-230ENST00000557201 ARVCFO00192 962 aa12.72□□□□□ -0.37
HNRNPC-230ENST00000557201 CD4P01730 458 aa12.72□□□□□ -0.37
HNRNPC-230ENST00000557201 TSPY3P0CV98 308 aa12.72□□□□□ -0.37
HNRNPC-230ENST00000557201 TSPY8P0CW00 308 aa12.72□□□□□ -0.37
HNRNPC-230ENST00000557201 SLC4A3P48751 1232 aa12.72□□□□□ -0.37
HNRNPC-230ENST00000557201 STAT2P52630 851 aa12.72□□□□□ -0.37
HNRNPC-230ENST00000557201 PDE4BQ07343 736 aa12.72□□□□□ -0.37
HNRNPC-230ENST00000557201 LRRFIP1Q32MZ4 808 aaKnown RBP12.72□□□□□ -0.37
HNRNPC-230ENST00000557201 FAM126BQ8IXS8 530 aa12.72□□□□□ -0.37
HNRNPC-230ENST00000557201 SLC43A3Q8NBI5 491 aa12.72□□□□□ -0.37
HNRNPC-230ENST00000557201 STAG1Q8WVM7 1258 aa12.72□□□□□ -0.37
HNRNPC-230ENST00000557201 AGBL1Q96MI9 1066 aa12.72□□□□□ -0.37
HNRNPC-230ENST00000557201 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.72□□□□□ -0.372e-8■■■□□ 14.8
HNRNPC-230ENST00000557201 NACAP1Q9BZK3 213 aa12.72□□□□□ -0.37
HNRNPC-230ENST00000557201 ACAD9Q9H845 621 aa12.72□□□□□ -0.37
HNRNPC-230ENST00000557201 A1CFQ9NQ94 594 aaKnown RBP12.72□□□□□ -0.37
HNRNPC-230ENST00000557201 GNEQ9Y223 722 aaKnown RBP12.72□□□□□ -0.37
HNRNPC-230ENST00000557201 CTDP1Q9Y5B0 961 aaPredicted RBP12.72□□□□□ -0.37
HNRNPC-230ENST00000557201 A0A0U1RQG5 324 aaPredicted RBP12.71□□□□□ -0.37
HNRNPC-230ENST00000557201 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.71□□□□□ -0.37
HNRNPC-230ENST00000557201 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.71□□□□□ -0.37
HNRNPC-230ENST00000557201 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.71□□□□□ -0.37
HNRNPC-230ENST00000557201 ERC2O15083 957 aa12.71□□□□□ -0.37
HNRNPC-230ENST00000557201 DNAJB2P25686 324 aa12.71□□□□□ -0.37
HNRNPC-230ENST00000557201 NUCB1Q02818 461 aa12.71□□□□□ -0.37
HNRNPC-230ENST00000557201 GRIN2CQ14957 1233 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms