RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 HELQQ8TDG4 1101 aa6.33□□□□□ -1.4
SCFD1-223ENST00000557076 EDEM1Q92611 657 aa6.33□□□□□ -1.4
SCFD1-223ENST00000557076 MRC1P22897 1456 aa6.33□□□□□ -1.4
SCFD1-223ENST00000557076 COL4A5P29400 1685 aa6.33□□□□□ -1.4
SCFD1-223ENST00000557076 SHTN1A0MZ66 631 aa6.32□□□□□ -1.4
SCFD1-223ENST00000557076 PRAMEF22A3QJZ6 481 aa6.32□□□□□ -1.4
SCFD1-223ENST00000557076 MEGF11A6BM72 1044 aa6.32□□□□□ -1.4
SCFD1-223ENST00000557076 YDJCA8MPS7 323 aa6.32□□□□□ -1.4
SCFD1-223ENST00000557076 GNAT3A8MTJ3 354 aa6.32□□□□□ -1.4
SCFD1-223ENST00000557076 KCNQ3O43525 872 aa6.32□□□□□ -1.4
SCFD1-223ENST00000557076 GAS2O43903 313 aaKnown RBP6.32□□□□□ -1.4
SCFD1-223ENST00000557076 FKTNO75072 461 aa6.32□□□□□ -1.4
SCFD1-223ENST00000557076 WNT11O96014 354 aa6.32□□□□□ -1.4
SCFD1-223ENST00000557076 RPS12P25398 132 aaKnown RBP6.32□□□□□ -1.4
SCFD1-223ENST00000557076 NLRP12P59046 1061 aa6.32□□□□□ -1.4
SCFD1-223ENST00000557076 C19orf57Q0VDD7 668 aa6.32□□□□□ -1.4
SCFD1-223ENST00000557076 SLC10A5Q5PT55 438 aa6.32□□□□□ -1.4
SCFD1-223ENST00000557076 ATCAYQ86WG3 371 aa6.32□□□□□ -1.4
SCFD1-223ENST00000557076 RASAL3Q86YV0 1011 aa6.32□□□□□ -1.4
SCFD1-223ENST00000557076 SP8Q8IXZ3 490 aa6.32□□□□□ -1.4
SCFD1-223ENST00000557076 C1orf127Q8N9H9 656 aa6.32□□□□□ -1.4
SCFD1-223ENST00000557076 GIMAP7Q8NHV1 300 aa6.32□□□□□ -1.4
SCFD1-223ENST00000557076 SLC7A3Q8WY07 619 aa6.32□□□□□ -1.4
SCFD1-223ENST00000557076 SEPT3Q9UH03 358 aa6.32□□□□□ -1.4
SCFD1-223ENST00000557076 SOX13Q9UN79 622 aa6.32□□□□□ -1.4
SCFD1-223ENST00000557076 TCERG1O14776 1098 aaKnown RBP6.31□□□□□ -1.4
SCFD1-223ENST00000557076 PDGFAP04085 211 aa6.31□□□□□ -1.4
SCFD1-223ENST00000557076 HMOX1P09601 288 aa6.31□□□□□ -1.4
SCFD1-223ENST00000557076 EN2P19622 333 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-223ENST00000557076 MZF1P28698 734 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-223ENST00000557076 PIP4K2AP48426 406 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-223ENST00000557076 DNM1Q05193 864 aaKnown RBP6.31□□□□□ -1.4
SCFD1-223ENST00000557076 DPP8Q6V1X1 898 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-223ENST00000557076 TMEM102Q8N9M5 508 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-223ENST00000557076 PANK3Q9H999 370 aa6.31□□□□□ -1.4
SCFD1-223ENST00000557076 COL11A2P13942 1736 aaPredicted RBP6.3□□□□□ -1.4
SCFD1-223ENST00000557076 CACNA1SQ13698 1873 aa6.3□□□□□ -1.4
SCFD1-223ENST00000557076 ADM5C9JUS6 153 aa6.3□□□□□ -1.4
SCFD1-223ENST00000557076 PSMD14O00487 310 aa6.3□□□□□ -1.4
SCFD1-223ENST00000557076 EIF4EBP3O60516 100 aaPredicted RBP6.3□□□□□ -1.4
SCFD1-223ENST00000557076 ACPPP15309 386 aa6.3□□□□□ -1.4
SCFD1-223ENST00000557076 CPSF6Q16630 551 aaKnown RBP eCLIP6.3□□□□□ -1.4
SCFD1-223ENST00000557076 C8orf34Q49A92 452 aa6.3□□□□□ -1.4
SCFD1-223ENST00000557076 TBC1D10BQ4KMP7 808 aaPredicted RBP6.3□□□□□ -1.4
SCFD1-223ENST00000557076 ALKBH2Q6NS38 261 aa6.3□□□□□ -1.4
SCFD1-223ENST00000557076 BSNDQ8WZ55 320 aa6.3□□□□□ -1.4
SCFD1-223ENST00000557076 ARMC5Q96C12 935 aa6.3□□□□□ -1.4
SCFD1-223ENST00000557076 CCDC97Q96F63 343 aaPredicted RBP6.3□□□□□ -1.4
SCFD1-223ENST00000557076 R3HDMLQ9H3Y0 253 aa6.3□□□□□ -1.4
SCFD1-223ENST00000557076 ANKRD26Q9UPS8 1709 aa6.3□□□□□ -1.4
SCFD1-223ENST00000557076 WDR64B1ANS9 1081 aa6.29□□□□□ -1.4
SCFD1-223ENST00000557076 H0YGN5 161 aa6.29□□□□□ -1.4
SCFD1-223ENST00000557076 ADAMTS4O75173 837 aa6.29□□□□□ -1.4
SCFD1-223ENST00000557076 VIL1P09327 827 aaKnown RBP6.29□□□□□ -1.4
SCFD1-223ENST00000557076 EDN3P14138 238 aa6.29□□□□□ -1.4
SCFD1-223ENST00000557076 MAP4P27816 1152 aaKnown RBP6.29□□□□□ -1.4
SCFD1-223ENST00000557076 INHBEP58166 350 aa6.29□□□□□ -1.4
SCFD1-223ENST00000557076 SREBF2Q12772 1141 aa6.29□□□□□ -1.4
SCFD1-223ENST00000557076 SUSD4Q5VX71 490 aa6.29□□□□□ -1.4
SCFD1-223ENST00000557076 OTOP1Q7RTM1 612 aa6.29□□□□□ -1.4
SCFD1-223ENST00000557076 PPP1R42Q7Z4L9 355 aa6.29□□□□□ -1.4
SCFD1-223ENST00000557076 ZNF34Q8IZ26 560 aa6.29□□□□□ -1.4
SCFD1-223ENST00000557076 CDCA5Q96FF9 252 aa6.29□□□□□ -1.4
SCFD1-223ENST00000557076 CHRDQ9H2X0 955 aa6.29□□□□□ -1.4
SCFD1-223ENST00000557076 SOX17Q9H6I2 414 aaPredicted RBP6.29□□□□□ -1.4
SCFD1-223ENST00000557076 SUGCTQ9HAC7 445 aa6.29□□□□□ -1.4
SCFD1-223ENST00000557076 CYP4F12Q9HCS2 524 aa6.29□□□□□ -1.4
SCFD1-223ENST00000557076 PTPN22Q9Y2R2 807 aa6.29□□□□□ -1.4
SCFD1-223ENST00000557076 RNF114Q9Y508 228 aa6.29□□□□□ -1.4
SCFD1-223ENST00000557076 TRIM17Q9Y577 477 aa6.29□□□□□ -1.4
SCFD1-223ENST00000557076 CEMIPQ8WUJ3 1361 aa6.29□□□□□ -1.4
SCFD1-223ENST00000557076 SCN11AQ9UI33 1791 aa6.29□□□□□ -1.4
SCFD1-223ENST00000557076 LAMA3Q16787 3333 aa6.28□□□□□ -1.4
SCFD1-223ENST00000557076 RIC1Q4ADV7 1423 aa6.28□□□□□ -1.4
SCFD1-223ENST00000557076 UBE2Q2LH0YL09 131 aa6.28□□□□□ -1.4
SCFD1-223ENST00000557076 DIAPH1O60610 1272 aaKnown RBP6.28□□□□□ -1.4
SCFD1-223ENST00000557076 EIF1AXP47813 144 aaKnown RBP6.28□□□□□ -1.4
SCFD1-223ENST00000557076 IKBKEQ14164 716 aa6.28□□□□□ -1.4
SCFD1-223ENST00000557076 KIF4BQ2VIQ3 1234 aa6.28□□□□□ -1.4
SCFD1-223ENST00000557076 TMC4Q7Z404 712 aa6.28□□□□□ -1.4
SCFD1-223ENST00000557076 SMG8Q8ND04 991 aaKnown RBP6.28□□□□□ -1.4
SCFD1-223ENST00000557076 NXPE3Q969Y0 559 aa6.28□□□□□ -1.4
SCFD1-223ENST00000557076 OSMRQ99650 979 aa6.28□□□□□ -1.4
SCFD1-223ENST00000557076 TMPRSS13Q9BYE2 586 aa6.28□□□□□ -1.4
SCFD1-223ENST00000557076 SERPINA10Q9UK55 444 aa6.28□□□□□ -1.4
SCFD1-223ENST00000557076 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.28□□□□□ -1.4
SCFD1-223ENST00000557076 ARFGEF2Q9Y6D5 1785 aa6.28□□□□□ -1.4
SCFD1-223ENST00000557076 ABCC12Q96J65 1359 aa6.28□□□□□ -1.4
SCFD1-223ENST00000557076 MAP3K15Q6ZN16 1313 aa6.27□□□□□ -1.41
SCFD1-223ENST00000557076 PITPNM2Q9BZ72 1349 aa6.27□□□□□ -1.41
SCFD1-223ENST00000557076 KIF20BQ96Q89 1820 aa6.27□□□□□ -1.41
SCFD1-223ENST00000557076 SOX1O00570 391 aaPredicted RBP6.27□□□□□ -1.41
SCFD1-223ENST00000557076 NTSR2O95665 410 aa6.27□□□□□ -1.41
SCFD1-223ENST00000557076 MPSTP25325 297 aa6.27□□□□□ -1.41
SCFD1-223ENST00000557076 ZNF280AP59817 542 aaPredicted RBP6.27□□□□□ -1.41
SCFD1-223ENST00000557076 EHHADHQ08426 723 aa6.27□□□□□ -1.41
SCFD1-223ENST00000557076 PARP10Q53GL7 1025 aa6.27□□□□□ -1.41
SCFD1-223ENST00000557076 SNX29Q8TEQ0 813 aa6.27□□□□□ -1.41
SCFD1-223ENST00000557076 MFSD14AQ96MC6 490 aa6.27□□□□□ -1.41
SCFD1-223ENST00000557076 HHIPQ96QV1 700 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms