RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 PFKMP08237 780 aa15.26■□□□□ 0.03
PSEN1-220ENST00000557037 PTGS1P23219 599 aa15.26■□□□□ 0.03
PSEN1-220ENST00000557037 SLC4A3P48751 1232 aa15.26■□□□□ 0.03
PSEN1-220ENST00000557037 TMCO2Q7Z6W1 182 aaPredicted RBP15.26■□□□□ 0.03
PSEN1-220ENST00000557037 PHOSPHO2Q8TCD6 241 aa15.26■□□□□ 0.03
PSEN1-220ENST00000557037 PIH1D3Q9NQM4 214 aaKnown RBP15.26■□□□□ 0.03
PSEN1-220ENST00000557037 ADAMTS5Q9UNA0 930 aa15.26■□□□□ 0.03
PSEN1-220ENST00000557037 PARP14Q460N5 1801 aa15.26■□□□□ 0.03
PSEN1-220ENST00000557037 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.25■□□□□ 0.03
PSEN1-220ENST00000557037 VWA5AO00534 786 aa15.25■□□□□ 0.03
PSEN1-220ENST00000557037 ZP2Q05996 745 aa15.25■□□□□ 0.03
PSEN1-220ENST00000557037 SIAH1Q8IUQ4 282 aa15.25■□□□□ 0.03
PSEN1-220ENST00000557037 FTOQ9C0B1 505 aaKnown RBP eCLIP15.25■□□□□ 0.03
PSEN1-220ENST00000557037 ABHD16BQ9H3Z7 469 aa15.25■□□□□ 0.03
PSEN1-220ENST00000557037 SUGCTQ9HAC7 445 aa15.25■□□□□ 0.03
PSEN1-220ENST00000557037 TRMT13Q9NUP7 481 aaKnown RBP15.25■□□□□ 0.03
PSEN1-220ENST00000557037 ZNF214Q9UL59 606 aaPredicted RBP15.25■□□□□ 0.03
PSEN1-220ENST00000557037 WDR46O15213 610 aaKnown RBP15.24■□□□□ 0.03
PSEN1-220ENST00000557037 CABYRO75952 493 aa15.24■□□□□ 0.03
PSEN1-220ENST00000557037 POLR3DP05423 398 aaPredicted RBP15.24■□□□□ 0.03
PSEN1-220ENST00000557037 COPB2P35606 906 aa15.24■□□□□ 0.03
PSEN1-220ENST00000557037 TCF15Q12870 199 aa15.24■□□□□ 0.03
PSEN1-220ENST00000557037 TTC39AQ5SRH9 613 aa15.24■□□□□ 0.03
PSEN1-220ENST00000557037 VCPKMTQ9H867 229 aa15.24■□□□□ 0.03
PSEN1-220ENST00000557037 TET1Q8NFU7 2136 aa15.23■□□□□ 0.03
PSEN1-220ENST00000557037 DNAJC25-GNG10A0A024R161 153 aa15.23■□□□□ 0.03
PSEN1-220ENST00000557037 TNFAIP2Q03169 654 aa15.23■□□□□ 0.03
PSEN1-220ENST00000557037 FSCN1Q16658 493 aaKnown RBP15.23■□□□□ 0.03
PSEN1-220ENST00000557037 PUS10Q3MIT2 529 aaKnown RBP15.23■□□□□ 0.03
PSEN1-220ENST00000557037 EP400NLQ6ZTU2 488 aa15.23■□□□□ 0.03
PSEN1-220ENST00000557037 ARMCX2Q7L311 632 aa15.23■□□□□ 0.03
PSEN1-220ENST00000557037 PIAS4Q8N2W9 510 aaPredicted RBP15.23■□□□□ 0.03
PSEN1-220ENST00000557037 REPS2Q8NFH8 660 aa15.23■□□□□ 0.03
PSEN1-220ENST00000557037 SSH1Q8WYL5 1049 aa15.23■□□□□ 0.03
PSEN1-220ENST00000557037 ALDH8A1Q9H2A2 487 aaPredicted RBP15.23■□□□□ 0.03
PSEN1-220ENST00000557037 ARHGEF10LQ9HCE6 1279 aa15.23■□□□□ 0.03
PSEN1-220ENST00000557037 MUTYHQ9UIF7 546 aa15.23■□□□□ 0.03
PSEN1-220ENST00000557037 TMX2Q9Y320 296 aa15.23■□□□□ 0.03
PSEN1-220ENST00000557037 RIPK3Q9Y572 518 aa15.23■□□□□ 0.03
PSEN1-220ENST00000557037 SRGAP3O43295 1099 aa15.22■□□□□ 0.03
PSEN1-220ENST00000557037 RAD21O60216 631 aa15.22■□□□□ 0.03
PSEN1-220ENST00000557037 IRS1P35568 1242 aa15.22■□□□□ 0.03
PSEN1-220ENST00000557037 ZAP70P43403 619 aa15.22■□□□□ 0.03
PSEN1-220ENST00000557037 NKX3-2P78367 333 aa15.22■□□□□ 0.03
PSEN1-220ENST00000557037 ICA1Q05084 483 aa15.22■□□□□ 0.03
PSEN1-220ENST00000557037 GABPAQ06546 454 aa15.22■□□□□ 0.03
PSEN1-220ENST00000557037 SNRNP48Q6IEG0 339 aaKnown RBP15.22■□□□□ 0.03
PSEN1-220ENST00000557037 TMEM179Q6ZVK1 233 aa15.22■□□□□ 0.03
PSEN1-220ENST00000557037 ZNF467Q7Z7K2 595 aaPredicted RBP15.22■□□□□ 0.03
PSEN1-220ENST00000557037 FGD4Q96M96 766 aa15.22■□□□□ 0.03
PSEN1-220ENST00000557037 ZBED2Q9BTP6 218 aa15.22■□□□□ 0.03
PSEN1-220ENST00000557037 PPP1R9AQ9ULJ8 1098 aa15.22■□□□□ 0.03
PSEN1-220ENST00000557037 MYO7AQ13402 2215 aa15.22■□□□□ 0.03
PSEN1-220ENST00000557037 C19orf67A6NJJ6 358 aa15.21■□□□□ 0.03
PSEN1-220ENST00000557037 DYNC1LI2O43237 492 aaPredicted RBP15.21■□□□□ 0.03
PSEN1-220ENST00000557037 TLK2Q86UE8 772 aa15.21■□□□□ 0.03
PSEN1-220ENST00000557037 CCDC144CPQ8IYA2 1237 aa15.21■□□□□ 0.03
PSEN1-220ENST00000557037 NEK9Q8TD19 979 aa15.21■□□□□ 0.03
PSEN1-220ENST00000557037 KATNBL1Q9H079 304 aa15.21■□□□□ 0.03
PSEN1-220ENST00000557037 AP5M1Q9H0R1 490 aa15.21■□□□□ 0.03
PSEN1-220ENST00000557037 SH2D4AQ9H788 454 aa15.21■□□□□ 0.03
PSEN1-220ENST00000557037 TNKSO95271 1327 aa15.2■□□□□ 0.02
PSEN1-220ENST00000557037 TPRP12270 2363 aaKnown RBP15.2■□□□□ 0.02
PSEN1-220ENST00000557037 GVINP1Q7Z2Y8 2422 aa15.2■□□□□ 0.02
PSEN1-220ENST00000557037 IDH1O75874 414 aaKnown RBP15.2■□□□□ 0.02
PSEN1-220ENST00000557037 CYP2D6P10635 497 aa15.2■□□□□ 0.02
PSEN1-220ENST00000557037 AKR1B1P15121 316 aa15.2■□□□□ 0.02
PSEN1-220ENST00000557037 KCNJ6P48051 423 aa15.2■□□□□ 0.02
PSEN1-220ENST00000557037 FAM83BQ5T0W9 1011 aa15.2■□□□□ 0.02
PSEN1-220ENST00000557037 ADHFE1Q8IWW8 467 aa15.2■□□□□ 0.02
PSEN1-220ENST00000557037 MAGEB6Q8N7X4 407 aa15.2■□□□□ 0.02
PSEN1-220ENST00000557037 TEX13BQ9BXU2 312 aa15.2■□□□□ 0.02
PSEN1-220ENST00000557037 SEZ6LQ9BYH1 1024 aa15.2■□□□□ 0.02
PSEN1-220ENST00000557037 UPF3BQ9BZI7 483 aaKnown RBP15.2■□□□□ 0.02
PSEN1-220ENST00000557037 PTPRSQ13332 1948 aa15.19■□□□□ 0.02
PSEN1-220ENST00000557037 ZEB2O60315 1214 aa15.19■□□□□ 0.02
PSEN1-220ENST00000557037 RFC2P35250 354 aa15.19■□□□□ 0.02
PSEN1-220ENST00000557037 ERVK-21P61565 698 aa15.19■□□□□ 0.02
PSEN1-220ENST00000557037 PPP1R13LQ8WUF5 828 aa15.19■□□□□ 0.02
PSEN1-220ENST00000557037 PBXIP1Q96AQ6 731 aa15.19■□□□□ 0.02
PSEN1-220ENST00000557037 TGS1Q96RS0 853 aaKnown RBP15.19■□□□□ 0.02
PSEN1-220ENST00000557037 MEIS3Q99687 375 aa15.19■□□□□ 0.02
PSEN1-220ENST00000557037 DBNDD2Q9BQY9 259 aa15.19■□□□□ 0.02
PSEN1-220ENST00000557037 MCM9Q9NXL9 1143 aa15.19■□□□□ 0.02
PSEN1-220ENST00000557037 PRKAG3Q9UGI9 489 aa15.19■□□□□ 0.02
PSEN1-220ENST00000557037 HDAC5Q9UQL6 1122 aa15.19■□□□□ 0.02
PSEN1-220ENST00000557037 GNEQ9Y223 722 aaKnown RBP15.19■□□□□ 0.02
PSEN1-220ENST00000557037 NCOR2Q9Y618 2525 aa15.18■□□□□ 0.02
PSEN1-220ENST00000557037 IQCF3P0C7M6 154 aa15.18■□□□□ 0.02
PSEN1-220ENST00000557037 SUPT20HL2P0C7V6 817 aa15.18■□□□□ 0.02
PSEN1-220ENST00000557037 SMPD1P17405 629 aa15.18■□□□□ 0.02
PSEN1-220ENST00000557037 CCDC158Q5M9N0 1113 aa15.18■□□□□ 0.02
PSEN1-220ENST00000557037 TMEM63BQ5T3F8 832 aa15.18■□□□□ 0.02
PSEN1-220ENST00000557037 CPXCR1Q8N123 301 aa15.18■□□□□ 0.02
PSEN1-220ENST00000557037 ANKRD35Q8N283 1001 aa15.18■□□□□ 0.02
PSEN1-220ENST00000557037 RETREG2Q8NC44 543 aa15.18■□□□□ 0.02
PSEN1-220ENST00000557037 ATOH1Q92858 354 aaPredicted RBP15.18■□□□□ 0.02
PSEN1-220ENST00000557037 DYNLL2Q96FJ2 89 aa15.18■□□□□ 0.02
PSEN1-220ENST00000557037 FAM50BQ9Y247 325 aa15.18■□□□□ 0.02
PSEN1-220ENST00000557037 DDX49Q9Y6V7 483 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 191.6 ms