RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 PLCH1Q4KWH8 1693 aa12.77□□□□□ -0.37
SRP54-213ENST00000556994 KLRC4O43908 158 aa12.76□□□□□ -0.37
SRP54-213ENST00000556994 TUBBP07437 444 aa12.76□□□□□ -0.37
SRP54-213ENST00000556994 GGCXP38435 758 aa12.76□□□□□ -0.37
SRP54-213ENST00000556994 TRAPPC10P48553 1259 aa12.76□□□□□ -0.37
SRP54-213ENST00000556994 TYW1BQ6NUM6 668 aa12.76□□□□□ -0.37
SRP54-213ENST00000556994 DTHD1Q6ZMT9 781 aa12.76□□□□□ -0.37
SRP54-213ENST00000556994 STAG2Q8N3U4 1231 aa12.76□□□□□ -0.37
SRP54-213ENST00000556994 GOLGA6L1Q8N7Z2 621 aa12.76□□□□□ -0.37
SRP54-213ENST00000556994 AFAP1L1Q8TED9 768 aa12.76□□□□□ -0.37
SRP54-213ENST00000556994 TUBGCP2Q9BSJ2 902 aa12.76□□□□□ -0.37
SRP54-213ENST00000556994 MAGEC2Q9UBF1 373 aaPredicted RBP12.76□□□□□ -0.37
SRP54-213ENST00000556994 JAG2Q9Y219 1238 aa12.76□□□□□ -0.37
SRP54-213ENST00000556994 PDS5AQ29RF7 1337 aaKnown RBP12.76□□□□□ -0.37
SRP54-213ENST00000556994 TSPY2A6NKD2 308 aa12.76□□□□□ -0.37
SRP54-213ENST00000556994 KRT86O43790 486 aa12.76□□□□□ -0.37
SRP54-213ENST00000556994 PRPF6O94906 941 aaKnown RBP12.76□□□□□ -0.37
SRP54-213ENST00000556994 IDEP14735 1019 aa12.76□□□□□ -0.37
SRP54-213ENST00000556994 KRT83P78385 493 aa12.76□□□□□ -0.37
SRP54-213ENST00000556994 TBC1D8BQ0IIM8 1120 aa12.76□□□□□ -0.37
SRP54-213ENST00000556994 STIM1Q13586 685 aa12.76□□□□□ -0.37
SRP54-213ENST00000556994 INF2Q27J81 1249 aa12.76□□□□□ -0.37
SRP54-213ENST00000556994 ARL6IP4Q66PJ3 421 aaKnown RBP12.76□□□□□ -0.37
SRP54-213ENST00000556994 INTS5Q6P9B9 1019 aaKnown RBP12.76□□□□□ -0.37
SRP54-213ENST00000556994 KRT26Q7Z3Y9 468 aa12.76□□□□□ -0.37
SRP54-213ENST00000556994 CSGALNACT2Q8N6G5 542 aa12.76□□□□□ -0.37
SRP54-213ENST00000556994 PYM1Q9BRP8 204 aaKnown RBP12.76□□□□□ -0.37
SRP54-213ENST00000556994 DISP2A7MBM2 1401 aa12.75□□□□□ -0.37
SRP54-213ENST00000556994 A0A1W2PQC6 194 aa12.75□□□□□ -0.37
SRP54-213ENST00000556994 RPS6KA5O75582 802 aa12.75□□□□□ -0.37
SRP54-213ENST00000556994 PLEKP08567 350 aaPredicted RBP12.75□□□□□ -0.37
SRP54-213ENST00000556994 FGRP09769 529 aa12.75□□□□□ -0.37
SRP54-213ENST00000556994 EEF1GP26641 437 aaKnown RBP12.75□□□□□ -0.37
SRP54-213ENST00000556994 UBA7P41226 1012 aa12.75□□□□□ -0.37
SRP54-213ENST00000556994 C3orf67Q6ZVT6 689 aa12.75□□□□□ -0.37
SRP54-213ENST00000556994 COG1Q8WTW3 980 aa12.75□□□□□ -0.37
SRP54-213ENST00000556994 DRC1Q96MC2 740 aa12.75□□□□□ -0.37
SRP54-213ENST00000556994 DUSP9Q99956 384 aaKnown RBP12.75□□□□□ -0.37
SRP54-213ENST00000556994 EXOC1Q9NV70 894 aa12.75□□□□□ -0.37
SRP54-213ENST00000556994 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.75□□□□□ -0.37
SRP54-213ENST00000556994 ZC3H4Q9UPT8 1303 aaKnown RBP12.75□□□□□ -0.37
SRP54-213ENST00000556994 EIF3CLB5ME19 914 aaKnown RBP12.74□□□□□ -0.37
SRP54-213ENST00000556994 PSMA7O14818 248 aa12.74□□□□□ -0.37
SRP54-213ENST00000556994 NTSR2O95665 410 aa12.74□□□□□ -0.37
SRP54-213ENST00000556994 SRGNP10124 158 aa12.74□□□□□ -0.37
SRP54-213ENST00000556994 KLRK1P26718 216 aa12.74□□□□□ -0.37
SRP54-213ENST00000556994 CYLC1P35663 651 aaPredicted RBP12.74□□□□□ -0.37
SRP54-213ENST00000556994 AARSP49588 968 aaKnown RBP eCLIP12.74□□□□□ -0.37
SRP54-213ENST00000556994 DNM2P50570 870 aa12.74□□□□□ -0.37
SRP54-213ENST00000556994 HSPA2P54652 639 aa12.74□□□□□ -0.37
SRP54-213ENST00000556994 EZH2Q15910 746 aaKnown RBP12.74□□□□□ -0.37
SRP54-213ENST00000556994 RCSD1Q6JBY9 416 aa12.74□□□□□ -0.37
SRP54-213ENST00000556994 TTI2Q6NXR4 508 aa12.74□□□□□ -0.37
SRP54-213ENST00000556994 EIF3CQ99613 913 aaKnown RBP12.74□□□□□ -0.37
SRP54-213ENST00000556994 THAP9Q9H5L6 903 aa12.74□□□□□ -0.37
SRP54-213ENST00000556994 VIPAS39Q9H9C1 493 aa12.74□□□□□ -0.37
SRP54-213ENST00000556994 DCP1AQ9NPI6 582 aaPredicted RBP12.74□□□□□ -0.37
SRP54-213ENST00000556994 ZNF804BA4D1E1 1349 aa12.74□□□□□ -0.37
SRP54-213ENST00000556994 CCDC194A0A1B0GVG4 234 aa12.74□□□□□ -0.37
SRP54-213ENST00000556994 CAMTA2O94983 1202 aa12.74□□□□□ -0.37
SRP54-213ENST00000556994 CRKLP46109 303 aaKnown RBP12.74□□□□□ -0.37
SRP54-213ENST00000556994 MECOMQ03112 1051 aa12.74□□□□□ -0.37
SRP54-213ENST00000556994 MAP9Q49MG5 647 aa12.74□□□□□ -0.37
SRP54-213ENST00000556994 CAVIN4Q5BKX8 364 aa12.74□□□□□ -0.37
SRP54-213ENST00000556994 ANKRD40Q6AI12 368 aa12.74□□□□□ -0.37
SRP54-213ENST00000556994 CCNI2Q6ZMN8 369 aaPredicted RBP12.74□□□□□ -0.37
SRP54-213ENST00000556994 GIMAP8Q8ND71 665 aaPredicted RBP12.74□□□□□ -0.37
SRP54-213ENST00000556994 HDAC7Q8WUI4 952 aa12.74□□□□□ -0.37
SRP54-213ENST00000556994 HPS3Q969F9 1004 aa12.74□□□□□ -0.37
SRP54-213ENST00000556994 FAM84BQ96KN1 310 aaPredicted RBP12.74□□□□□ -0.37
SRP54-213ENST00000556994 PSMB7Q99436 277 aa12.74□□□□□ -0.37
SRP54-213ENST00000556994 CRACR2AQ9BSW2 395 aa12.74□□□□□ -0.37
SRP54-213ENST00000556994 SELENOOQ9BVL4 669 aa12.74□□□□□ -0.37
SRP54-213ENST00000556994 TTYH3Q9C0H2 523 aa12.74□□□□□ -0.37
SRP54-213ENST00000556994 RABEP2Q9H5N1 569 aa12.74□□□□□ -0.37
SRP54-213ENST00000556994 ZNHIT6Q9NWK9 470 aaKnown RBP12.74□□□□□ -0.37
SRP54-213ENST00000556994 SLAIN2Q9P270 581 aa12.74□□□□□ -0.37
SRP54-213ENST00000556994 LRWD1Q9UFC0 647 aa12.74□□□□□ -0.37
SRP54-213ENST00000556994 PCDHA4Q9UN74 947 aa12.74□□□□□ -0.37
SRP54-213ENST00000556994 TAF1P21675 1872 aa12.74□□□□□ -0.37
SRP54-213ENST00000556994 CACNA1SQ13698 1873 aa12.74□□□□□ -0.37
SRP54-213ENST00000556994 NHSL1Q5SYE7 1610 aa12.74□□□□□ -0.37
SRP54-213ENST00000556994 AGPSO00116 658 aa12.73□□□□□ -0.37
SRP54-213ENST00000556994 ZNF263O14978 683 aa12.73□□□□□ -0.37
SRP54-213ENST00000556994 FCER1AP12319 257 aa12.73□□□□□ -0.37
SRP54-213ENST00000556994 MATR3P43243 847 aaKnown RBP eCLIP12.73□□□□□ -0.375e-10■■■■□ 24.4
SRP54-213ENST00000556994 STK4Q13043 487 aa12.73□□□□□ -0.37
SRP54-213ENST00000556994 MEA1Q16626 185 aa12.73□□□□□ -0.37
SRP54-213ENST00000556994 PLCD3Q8N3E9 789 aa12.73□□□□□ -0.37
SRP54-213ENST00000556994 SMARCC1Q92922 1105 aaPredicted RBP12.73□□□□□ -0.37
SRP54-213ENST00000556994 NSUN4Q96CB9 384 aaKnown RBP12.73□□□□□ -0.37
SRP54-213ENST00000556994 CNOT6LQ96LI5 555 aaKnown RBP12.73□□□□□ -0.37
SRP54-213ENST00000556994 SMARCAL1Q9NZC9 954 aa12.73□□□□□ -0.37
SRP54-213ENST00000556994 MKRN1Q9UHC7 482 aaKnown RBP12.73□□□□□ -0.37
SRP54-213ENST00000556994 RHOBTB3O94955 611 aa12.73□□□□□ -0.37
SRP54-213ENST00000556994 IPO7O95373 1038 aaKnown RBP12.73□□□□□ -0.37
SRP54-213ENST00000556994 ERCC3P19447 782 aa12.73□□□□□ -0.37
SRP54-213ENST00000556994 CALML3P27482 149 aa12.73□□□□□ -0.37
SRP54-213ENST00000556994 ATP6V1AP38606 617 aa12.73□□□□□ -0.37
SRP54-213ENST00000556994 MTIF2P46199 727 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms