RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 ANO1Q5XXA6 986 aa26.71■■□□□ 1.87
TMEM260-214ENST00000556975 RASGRP2Q7LDG7 609 aa26.71■■□□□ 1.87
TMEM260-214ENST00000556975 AGBL1Q96MI9 1066 aa26.71■■□□□ 1.87
TMEM260-214ENST00000556975 ACAD9Q9H845 621 aa26.71■■□□□ 1.87
TMEM260-214ENST00000556975 TAL1P17542 331 aaPredicted RBP26.7■■□□□ 1.86
TMEM260-214ENST00000556975 GJC2Q5T442 439 aaPredicted RBP26.7■■□□□ 1.86
TMEM260-214ENST00000556975 CTNNA3Q9UI47 895 aa26.7■■□□□ 1.86
TMEM260-214ENST00000556975 CNPY2Q9Y2B0 182 aa26.7■■□□□ 1.86
TMEM260-214ENST00000556975 A0A1W2PPC1 479 aa26.69■■□□□ 1.86
TMEM260-214ENST00000556975 SNAI1O95863 264 aaPredicted RBP26.69■■□□□ 1.86
TMEM260-214ENST00000556975 LRRC41Q15345 812 aa26.69■■□□□ 1.86
TMEM260-214ENST00000556975 CCDC96Q2M329 555 aa26.69■■□□□ 1.86
TMEM260-214ENST00000556975 DGKHQ86XP1 1220 aa26.69■■□□□ 1.86
TMEM260-214ENST00000556975 FGD4Q96M96 766 aa26.69■■□□□ 1.86
TMEM260-214ENST00000556975 GDF15Q99988 308 aa26.69■■□□□ 1.86
TMEM260-214ENST00000556975 ZMYND8Q9ULU4 1186 aaPredicted RBP26.69■■□□□ 1.86
TMEM260-214ENST00000556975 MTMR7Q9Y216 660 aa26.69■■□□□ 1.86
TMEM260-214ENST00000556975 LAMA4Q16363 1823 aa26.69■■□□□ 1.86
TMEM260-214ENST00000556975 NEDD4P46934 1319 aa26.68■■□□□ 1.86
TMEM260-214ENST00000556975 KBTBD13C9JR72 458 aa26.68■■□□□ 1.86
TMEM260-214ENST00000556975 RARBP10826 455 aa26.68■■□□□ 1.86
TMEM260-214ENST00000556975 AKR1A1P14550 325 aa26.68■■□□□ 1.86
TMEM260-214ENST00000556975 BMP8BP34820 402 aa26.68■■□□□ 1.86
TMEM260-214ENST00000556975 TTBK2Q6IQ55 1244 aa26.68■■□□□ 1.86
TMEM260-214ENST00000556975 TRERF1Q96PN7 1200 aa26.68■■□□□ 1.86
TMEM260-214ENST00000556975 RANBP17Q9H2T7 1088 aaKnown RBP26.68■■□□□ 1.86
TMEM260-214ENST00000556975 RNF146Q9NTX7 359 aa26.68■■□□□ 1.86
TMEM260-214ENST00000556975 SNHG28P0DPA3 235 aa26.67■■□□□ 1.86
TMEM260-214ENST00000556975 PDHBP11177 359 aa26.67■■□□□ 1.86
TMEM260-214ENST00000556975 IMMTQ16891 758 aaKnown RBP26.67■■□□□ 1.86
TMEM260-214ENST00000556975 CCDC178Q5BJE1 867 aa26.67■■□□□ 1.86
TMEM260-214ENST00000556975 FAM133AQ8N9E0 248 aa26.67■■□□□ 1.86
TMEM260-214ENST00000556975 IL25Q9H293 177 aa26.67■■□□□ 1.86
TMEM260-214ENST00000556975 A1CFQ9NQ94 594 aaKnown RBP26.67■■□□□ 1.86
TMEM260-214ENST00000556975 XPNPEP3Q9NQH7 507 aa26.67■■□□□ 1.86
TMEM260-214ENST00000556975 HOMER2Q9NSB8 354 aa26.67■■□□□ 1.86
TMEM260-214ENST00000556975 DNAH12Q6ZR08 3092 aa26.67■■□□□ 1.86
TMEM260-214ENST00000556975 ICAM1P05362 532 aa26.66■■□□□ 1.86
TMEM260-214ENST00000556975 ALAS1P13196 640 aa26.66■■□□□ 1.86
TMEM260-214ENST00000556975 CCDC174Q6PII3 467 aa26.66■■□□□ 1.86
TMEM260-214ENST00000556975 RAD50Q92878 1312 aa26.65■■□□□ 1.86
TMEM260-214ENST00000556975 SYN1P17600 705 aa26.65■■□□□ 1.86
TMEM260-214ENST00000556975 SNAP25P60880 206 aa26.65■■□□□ 1.86
TMEM260-214ENST00000556975 SYDE2Q5VT97 1194 aa26.65■■□□□ 1.86
TMEM260-214ENST00000556975 IQCA1Q86XH1 822 aa26.65■■□□□ 1.86
TMEM260-214ENST00000556975 ANKS1AQ92625 1134 aa26.65■■□□□ 1.86
TMEM260-214ENST00000556975 ABHD16BQ9H3Z7 469 aa26.65■■□□□ 1.86
TMEM260-214ENST00000556975 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.65■■□□□ 1.86
TMEM260-214ENST00000556975 FAM184BQ9ULE4 1060 aa26.65■■□□□ 1.86
TMEM260-214ENST00000556975 POTEB2H3BUK9 544 aa26.64■■□□□ 1.86
TMEM260-214ENST00000556975 KDM4AO75164 1064 aa26.64■■□□□ 1.86
TMEM260-214ENST00000556975 SLC16A2P36021 539 aa26.64■■□□□ 1.86
TMEM260-214ENST00000556975 ZNF543Q08ER8 600 aa26.64■■□□□ 1.86
TMEM260-214ENST00000556975 ACVR2BQ13705 512 aa26.64■■□□□ 1.86
TMEM260-214ENST00000556975 SLC39A5Q6ZMH5 540 aa26.64■■□□□ 1.86
TMEM260-214ENST00000556975 RNF180Q86T96 592 aa26.64■■□□□ 1.86
TMEM260-214ENST00000556975 CCPG1Q9ULG6 757 aa26.64■■□□□ 1.86
TMEM260-214ENST00000556975 FRMPD2Q68DX3 1309 aaPredicted RBP26.64■■□□□ 1.85
TMEM260-214ENST00000556975 CHMLP26374 656 aa26.63■■□□□ 1.85
TMEM260-214ENST00000556975 ATN1P54259 1190 aaPredicted RBP26.63■■□□□ 1.85
TMEM260-214ENST00000556975 CNTN2Q02246 1040 aa26.63■■□□□ 1.85
TMEM260-214ENST00000556975 SNX17Q15036 470 aa26.63■■□□□ 1.85
TMEM260-214ENST00000556975 ARMCX2Q7L311 632 aa26.63■■□□□ 1.85
TMEM260-214ENST00000556975 RUFY2Q8WXA3 655 aa26.63■■□□□ 1.85
TMEM260-214ENST00000556975 ZKSCAN3Q9BRR0 538 aa26.63■■□□□ 1.85
TMEM260-214ENST00000556975 KRT23Q9C075 422 aa26.63■■□□□ 1.85
TMEM260-214ENST00000556975 GPCPD1Q9NPB8 672 aa26.63■■□□□ 1.85
TMEM260-214ENST00000556975 ZSWIM5Q9P217 1185 aa26.63■■□□□ 1.85
TMEM260-214ENST00000556975 PHF24Q9UPV7 400 aa26.63■■□□□ 1.85
TMEM260-214ENST00000556975 B4E1Z4 1266 aa26.62■■□□□ 1.85
TMEM260-214ENST00000556975 ADAMTS4O75173 837 aa26.62■■□□□ 1.85
TMEM260-214ENST00000556975 PGK1P00558 417 aa26.62■■□□□ 1.85
TMEM260-214ENST00000556975 ADCYAP1R1P41586 468 aa26.62■■□□□ 1.85
TMEM260-214ENST00000556975 MUM1L1Q5H9M0 696 aa26.62■■□□□ 1.85
TMEM260-214ENST00000556975 C1orf53Q5VUE5 145 aa26.62■■□□□ 1.85
TMEM260-214ENST00000556975 CNNM2Q9H8M5 875 aa26.62■■□□□ 1.85
TMEM260-214ENST00000556975 PNMA2Q9UL42 364 aa26.62■■□□□ 1.85
TMEM260-214ENST00000556975 LAMA3Q16787 3333 aa26.61■■□□□ 1.85
TMEM260-214ENST00000556975 MCM3APO60318 1980 aa26.61■■□□□ 1.85
TMEM260-214ENST00000556975 SOWAHBA6NEL2 793 aa26.61■■□□□ 1.85
TMEM260-214ENST00000556975 MYCNP04198 464 aaPredicted RBP26.61■■□□□ 1.85
TMEM260-214ENST00000556975 MAGEA10P43363 369 aaPredicted RBP26.61■■□□□ 1.85
TMEM260-214ENST00000556975 RTP1P59025 263 aa26.61■■□□□ 1.85
TMEM260-214ENST00000556975 GPATCH4Q5T3I0 446 aaKnown RBP26.61■■□□□ 1.85
TMEM260-214ENST00000556975 CCDC144CPQ8IYA2 1237 aa26.61■■□□□ 1.85
TMEM260-214ENST00000556975 ZSCAN10Q96SZ4 725 aaPredicted RBP26.61■■□□□ 1.85
TMEM260-214ENST00000556975 KATNBL1Q9H079 304 aa26.61■■□□□ 1.85
TMEM260-214ENST00000556975 CYP39A1Q9NYL5 469 aa26.61■■□□□ 1.85
TMEM260-214ENST00000556975 ZHX1Q9UKY1 873 aaPredicted RBP26.61■■□□□ 1.85
TMEM260-214ENST00000556975 ASB14A6NK59 587 aa26.6■■□□□ 1.85
TMEM260-214ENST00000556975 DUSP11O75319 330 aaKnown RBP26.6■■□□□ 1.85
TMEM260-214ENST00000556975 TSEN34Q9BSV6 310 aaKnown RBP26.6■■□□□ 1.85
TMEM260-214ENST00000556975 PNMA1Q8ND90 353 aa26.59■■□□□ 1.85
TMEM260-214ENST00000556975 KLHDC9Q8NEP7 349 aa26.59■■□□□ 1.85
TMEM260-214ENST00000556975 CCDC144BQ3MJ40 725 aa26.58■■□□□ 1.85
TMEM260-214ENST00000556975 ENAHQ8N8S7 591 aaPredicted RBP26.58■■□□□ 1.85
TMEM260-214ENST00000556975 FERMT2Q96AC1 680 aa26.58■■□□□ 1.85
TMEM260-214ENST00000556975 LENG1Q96BZ8 264 aaPredicted RBP26.58■■□□□ 1.85
TMEM260-214ENST00000556975 KAT14Q9H8E8 782 aa26.58■■□□□ 1.85
TMEM260-214ENST00000556975 SYNRGQ9UMZ2 1314 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms