RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 TTC41PQ6P2S7 1318 aa21.79■■□□□ 1.08
VIPAS39-209ENST00000556909 LCTP09848 1927 aa21.78■■□□□ 1.08
VIPAS39-209ENST00000556909 TSPY3P0CV98 308 aa21.78■■□□□ 1.08
VIPAS39-209ENST00000556909 TSPY8P0CW00 308 aa21.78■■□□□ 1.08
VIPAS39-209ENST00000556909 BMP3P12645 472 aa21.78■■□□□ 1.08
VIPAS39-209ENST00000556909 IRX5P78411 483 aaPredicted RBP21.78■■□□□ 1.08
VIPAS39-209ENST00000556909 NACAP1Q9BZK3 213 aa21.78■■□□□ 1.08
VIPAS39-209ENST00000556909 ABHD16BQ9H3Z7 469 aa21.78■■□□□ 1.08
VIPAS39-209ENST00000556909 DCDC2CA8MYV0 355 aa21.77■■□□□ 1.08
VIPAS39-209ENST00000556909 C6orf222P0C671 652 aaPredicted RBP21.77■■□□□ 1.08
VIPAS39-209ENST00000556909 PDE4BQ07343 736 aa21.77■■□□□ 1.08
VIPAS39-209ENST00000556909 CCDC144BQ3MJ40 725 aa21.77■■□□□ 1.08
VIPAS39-209ENST00000556909 ARMCX2Q7L311 632 aa21.77■■□□□ 1.08
VIPAS39-209ENST00000556909 FSD1Q9BTV5 496 aa21.77■■□□□ 1.08
VIPAS39-209ENST00000556909 UPF3AQ9H1J1 476 aaKnown RBP21.77■■□□□ 1.08
VIPAS39-209ENST00000556909 HOMER2Q9NSB8 354 aa21.77■■□□□ 1.08
VIPAS39-209ENST00000556909 TBX21Q9UL17 535 aa21.77■■□□□ 1.08
VIPAS39-209ENST00000556909 PPARAQ07869 468 aa21.76■■□□□ 1.07
VIPAS39-209ENST00000556909 CCDC144CPQ8IYA2 1237 aa21.76■■□□□ 1.07
VIPAS39-209ENST00000556909 MAFAQ8NHW3 353 aaPredicted RBP21.76■■□□□ 1.07
VIPAS39-209ENST00000556909 OTUD7AQ8TE49 926 aaPredicted RBP21.76■■□□□ 1.07
VIPAS39-209ENST00000556909 MYLIPQ8WY64 445 aa21.76■■□□□ 1.07
VIPAS39-209ENST00000556909 GLT1D1Q96MS3 346 aa21.76■■□□□ 1.07
VIPAS39-209ENST00000556909 KATNBL1Q9H079 304 aa21.76■■□□□ 1.07
VIPAS39-209ENST00000556909 NAPBQ9H115 298 aa21.76■■□□□ 1.07
VIPAS39-209ENST00000556909 ELP1O95163 1332 aa21.76■■□□□ 1.07
VIPAS39-209ENST00000556909 SPTBN5Q9NRC6 3674 aaKnown RBP21.75■■□□□ 1.07
VIPAS39-209ENST00000556909 TMEM265A0A087WTH1 108 aa21.75■■□□□ 1.07
VIPAS39-209ENST00000556909 TMEM232C9JQI7 657 aa21.75■■□□□ 1.07
VIPAS39-209ENST00000556909 ERC2O15083 957 aa21.75■■□□□ 1.07
VIPAS39-209ENST00000556909 ASGR1P07306 291 aa21.75■■□□□ 1.07
VIPAS39-209ENST00000556909 SLC3A2P08195 630 aaKnown RBP21.75■■□□□ 1.07
VIPAS39-209ENST00000556909 FDX1P10109 184 aa21.75■■□□□ 1.07
VIPAS39-209ENST00000556909 STAT2P52630 851 aa21.75■■□□□ 1.07
VIPAS39-209ENST00000556909 GJA9P57773 515 aa21.75■■□□□ 1.07
VIPAS39-209ENST00000556909 TFAP4Q01664 338 aa21.75■■□□□ 1.07
VIPAS39-209ENST00000556909 ZMYM1Q5SVZ6 1142 aa21.75■■□□□ 1.07
VIPAS39-209ENST00000556909 PCSK9Q8NBP7 692 aaKnown RBP21.75■■□□□ 1.07
VIPAS39-209ENST00000556909 ACAD9Q9H845 621 aa21.75■■□□□ 1.07
VIPAS39-209ENST00000556909 ISY1Q9ULR0 285 aaKnown RBP21.75■■□□□ 1.07
VIPAS39-209ENST00000556909 ZNF536O15090 1300 aa21.75■■□□□ 1.07
VIPAS39-209ENST00000556909 MROH7Q68CQ1 1323 aa21.75■■□□□ 1.07
VIPAS39-209ENST00000556909 TIMP1P01033 207 aa21.74■■□□□ 1.07
VIPAS39-209ENST00000556909 CNTN2Q02246 1040 aa21.74■■□□□ 1.07
VIPAS39-209ENST00000556909 FAM133AQ8N9E0 248 aa21.74■■□□□ 1.07
VIPAS39-209ENST00000556909 GMCL1Q96IK5 515 aa21.74■■□□□ 1.07
VIPAS39-209ENST00000556909 SPC25Q9HBM1 224 aa21.74■■□□□ 1.07
VIPAS39-209ENST00000556909 CDK7P50613 346 aa21.73■■□□□ 1.07
VIPAS39-209ENST00000556909 FAM160B2Q86V87 743 aa21.73■■□□□ 1.07
VIPAS39-209ENST00000556909 A1CFQ9NQ94 594 aaKnown RBP21.73■■□□□ 1.07
VIPAS39-209ENST00000556909 RNF146Q9NTX7 359 aa21.73■■□□□ 1.07
VIPAS39-209ENST00000556909 PCDHB15Q9Y5E8 787 aa21.73■■□□□ 1.07
VIPAS39-209ENST00000556909 A0A0U1RQG5 324 aaPredicted RBP21.72■■□□□ 1.07
VIPAS39-209ENST00000556909 CTAGE5O15320 804 aa21.72■■□□□ 1.07
VIPAS39-209ENST00000556909 FOXP2O15409 715 aa21.72■■□□□ 1.07
VIPAS39-209ENST00000556909 FOSL2P15408 326 aa21.72■■□□□ 1.07
VIPAS39-209ENST00000556909 SLC1A4P43007 532 aa21.72■■□□□ 1.07
VIPAS39-209ENST00000556909 IKQ13123 557 aaPredicted RBP21.72■■□□□ 1.07
VIPAS39-209ENST00000556909 GNASQ5JWF2 1037 aa21.72■■□□□ 1.07
VIPAS39-209ENST00000556909 CHURC1Q8WUH1 139 aa21.72■■□□□ 1.07
VIPAS39-209ENST00000556909 STAG1Q8WVM7 1258 aa21.72■■□□□ 1.07
VIPAS39-209ENST00000556909 CHMP4CQ96CF2 233 aa21.72■■□□□ 1.07
VIPAS39-209ENST00000556909 AGBL1Q96MI9 1066 aa21.72■■□□□ 1.07
VIPAS39-209ENST00000556909 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.72■■□□□ 1.07
VIPAS39-209ENST00000556909 GBF1Q92538 1859 aa21.71■■□□□ 1.07
VIPAS39-209ENST00000556909 MX1P20591 662 aa21.71■■□□□ 1.07
VIPAS39-209ENST00000556909 MCCP23508 829 aa21.71■■□□□ 1.07
VIPAS39-209ENST00000556909 NKX3-2P78367 333 aa21.71■■□□□ 1.07
VIPAS39-209ENST00000556909 MFSD5Q6N075 450 aa21.71■■□□□ 1.07
VIPAS39-209ENST00000556909 CCDC129Q6ZRS4 1044 aa21.71■■□□□ 1.07
VIPAS39-209ENST00000556909 RASGRP2Q7LDG7 609 aa21.71■■□□□ 1.07
VIPAS39-209ENST00000556909 FAM126BQ8IXS8 530 aa21.71■■□□□ 1.07
VIPAS39-209ENST00000556909 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.71■■□□□ 1.07
VIPAS39-209ENST00000556909 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.7■■□□□ 1.06
VIPAS39-209ENST00000556909 SOWAHBA6NEL2 793 aa21.7■■□□□ 1.06
VIPAS39-209ENST00000556909 ARVCFO00192 962 aa21.7■■□□□ 1.06
VIPAS39-209ENST00000556909 DNAJB2P25686 324 aa21.7■■□□□ 1.06
VIPAS39-209ENST00000556909 TKFCQ3LXA3 575 aa21.7■■□□□ 1.06
VIPAS39-209ENST00000556909 KCTD1Q719H9 257 aa21.7■■□□□ 1.06
VIPAS39-209ENST00000556909 VTI1AQ96AJ9 217 aa21.7■■□□□ 1.06
VIPAS39-209ENST00000556909 IL17RBQ9NRM6 502 aa21.7■■□□□ 1.06
VIPAS39-209ENST00000556909 STX8Q9UNK0 236 aa21.7■■□□□ 1.06
VIPAS39-209ENST00000556909 ASTN1O14525 1302 aa21.7■■□□□ 1.06
VIPAS39-209ENST00000556909 SALL3Q9BXA9 1300 aa21.7■■□□□ 1.06
VIPAS39-209ENST00000556909 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.69■■□□□ 1.06
VIPAS39-209ENST00000556909 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.69■■□□□ 1.06
VIPAS39-209ENST00000556909 TSPY2A6NKD2 308 aa21.69■■□□□ 1.06
VIPAS39-209ENST00000556909 NMT2O60551 498 aa21.69■■□□□ 1.06
VIPAS39-209ENST00000556909 PLA2G6O60733 806 aa21.69■■□□□ 1.06
VIPAS39-209ENST00000556909 ALAS1P13196 640 aa21.69■■□□□ 1.06
VIPAS39-209ENST00000556909 BEX3Q00994 111 aa21.69■■□□□ 1.06
VIPAS39-209ENST00000556909 TNFAIP2Q03169 654 aa21.69■■□□□ 1.06
VIPAS39-209ENST00000556909 CTDSPL2Q05D32 466 aa21.69■■□□□ 1.06
VIPAS39-209ENST00000556909 PPIGQ13427 754 aaKnown RBP eCLIP21.69■■□□□ 1.06
VIPAS39-209ENST00000556909 PPP4R3BQ5MIZ7 849 aa21.69■■□□□ 1.06
VIPAS39-209ENST00000556909 TRERF1Q96PN7 1200 aa21.69■■□□□ 1.06
VIPAS39-209ENST00000556909 INCENPQ9NQS7 918 aa21.69■■□□□ 1.06
VIPAS39-209ENST00000556909 ASB14A6NK59 587 aa21.68■■□□□ 1.06
VIPAS39-209ENST00000556909 SNAP25P60880 206 aa21.68■■□□□ 1.06
VIPAS39-209ENST00000556909 CCDC174Q6PII3 467 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms