RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 PNMA2Q9UL42 364 aa20.33■□□□□ 0.85
CHGA-206ENST00000556876 ISY1Q9ULR0 285 aaKnown RBP20.33■□□□□ 0.85
CHGA-206ENST00000556876 PCDHB15Q9Y5E8 787 aa20.33■□□□□ 0.85
CHGA-206ENST00000556876 KCNA10Q16322 511 aa20.32■□□□□ 0.84
CHGA-206ENST00000556876 RCSD1Q6JBY9 416 aa20.32■□□□□ 0.84
CHGA-206ENST00000556876 LRRC47Q8N1G4 583 aaKnown RBP20.32■□□□□ 0.84
CHGA-206ENST00000556876 STX8Q9UNK0 236 aa20.32■□□□□ 0.84
CHGA-206ENST00000556876 SYNRGQ9UMZ2 1314 aa20.31■□□□□ 0.84
CHGA-206ENST00000556876 PQBP1O60828 265 aaKnown RBP20.31■□□□□ 0.84
CHGA-206ENST00000556876 GJA9P57773 515 aa20.31■□□□□ 0.84
CHGA-206ENST00000556876 FPGSQ05932 587 aa20.31■□□□□ 0.84
CHGA-206ENST00000556876 ALX1Q15699 326 aa20.31■□□□□ 0.84
CHGA-206ENST00000556876 HELLSQ9NRZ9 838 aa20.31■□□□□ 0.84
CHGA-206ENST00000556876 ANAPC4Q9UJX5 808 aa20.31■□□□□ 0.84
CHGA-206ENST00000556876 MYH7P12883 1935 aa20.31■□□□□ 0.84
CHGA-206ENST00000556876 LAMA2P24043 3122 aaKnown RBP20.3■□□□□ 0.84
CHGA-206ENST00000556876 CABYRO75952 493 aa20.3■□□□□ 0.84
CHGA-206ENST00000556876 C6orf222P0C671 652 aaPredicted RBP20.3■□□□□ 0.84
CHGA-206ENST00000556876 NT5C2P49902 561 aa20.3■□□□□ 0.84
CHGA-206ENST00000556876 NKX3-2P78367 333 aa20.3■□□□□ 0.84
CHGA-206ENST00000556876 CCDC144BQ3MJ40 725 aa20.3■□□□□ 0.84
CHGA-206ENST00000556876 CCSAPQ6IQ19 270 aaPredicted RBP20.3■□□□□ 0.84
CHGA-206ENST00000556876 CCDC129Q6ZRS4 1044 aa20.3■□□□□ 0.84
CHGA-206ENST00000556876 ARMCX2Q7L311 632 aa20.3■□□□□ 0.84
CHGA-206ENST00000556876 SH3RF1Q7Z6J0 888 aa20.3■□□□□ 0.84
CHGA-206ENST00000556876 VTI1AQ96AJ9 217 aa20.3■□□□□ 0.84
CHGA-206ENST00000556876 SEC62Q99442 399 aaKnown RBP20.3■□□□□ 0.84
CHGA-206ENST00000556876 UPF3AQ9H1J1 476 aaKnown RBP20.3■□□□□ 0.84
CHGA-206ENST00000556876 FRMPD3Q5JV73 1810 aa20.3■□□□□ 0.84
CHGA-206ENST00000556876 TLR3O15455 904 aaKnown RBP20.29■□□□□ 0.84
CHGA-206ENST00000556876 ZEB2O60315 1214 aa20.29■□□□□ 0.84
CHGA-206ENST00000556876 PCP11498 1178 aaKnown RBP20.29■□□□□ 0.84
CHGA-206ENST00000556876 MCCP23508 829 aa20.29■□□□□ 0.84
CHGA-206ENST00000556876 GNASQ5JWF2 1037 aa20.29■□□□□ 0.84
CHGA-206ENST00000556876 ANKRD45Q5TZF3 282 aa20.29■□□□□ 0.84
CHGA-206ENST00000556876 RNPC3Q96LT9 517 aaKnown RBP20.29■□□□□ 0.84
CHGA-206ENST00000556876 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.29■□□□□ 0.84
CHGA-206ENST00000556876 LOC102724159A0A0B4J2E5 919 aa20.28■□□□□ 0.84
CHGA-206ENST00000556876 A0A0U1RQG5 324 aaPredicted RBP20.28■□□□□ 0.84
CHGA-206ENST00000556876 ORC4O43929 436 aa20.28■□□□□ 0.84
CHGA-206ENST00000556876 TIMP1P01033 207 aa20.28■□□□□ 0.84
CHGA-206ENST00000556876 FAAP100Q0VG06 881 aa20.28■□□□□ 0.84
CHGA-206ENST00000556876 PWP2Q15269 919 aaKnown RBP20.28■□□□□ 0.84
CHGA-206ENST00000556876 C9orf50Q5SZB4 431 aa20.28■□□□□ 0.84
CHGA-206ENST00000556876 CCDC144CPQ8IYA2 1237 aa20.28■□□□□ 0.84
CHGA-206ENST00000556876 FAM133AQ8N9E0 248 aa20.28■□□□□ 0.84
CHGA-206ENST00000556876 DCAF4Q8WV16 495 aa20.28■□□□□ 0.84
CHGA-206ENST00000556876 TRERF1Q96PN7 1200 aa20.28■□□□□ 0.84
CHGA-206ENST00000556876 SEMA6BQ9H3T3 888 aa20.28■□□□□ 0.84
CHGA-206ENST00000556876 HOMER2Q9NSB8 354 aa20.28■□□□□ 0.84
CHGA-206ENST00000556876 RNF146Q9NTX7 359 aa20.28■□□□□ 0.84
CHGA-206ENST00000556876 GREB1LQ9C091 1923 aaPredicted RBP20.27■□□□□ 0.84
CHGA-206ENST00000556876 RANBP6O60518 1105 aaKnown RBP20.27■□□□□ 0.84
CHGA-206ENST00000556876 ASGR1P07306 291 aa20.27■□□□□ 0.84
CHGA-206ENST00000556876 FGRP09769 529 aa20.27■□□□□ 0.84
CHGA-206ENST00000556876 NOVP48745 357 aa20.27■□□□□ 0.84
CHGA-206ENST00000556876 CDK7P50613 346 aa20.27■□□□□ 0.84
CHGA-206ENST00000556876 HDAC1Q13547 482 aaPredicted RBP20.27■□□□□ 0.84
CHGA-206ENST00000556876 IQSEC1Q6DN90 963 aa20.27■□□□□ 0.84
CHGA-206ENST00000556876 GUCD1Q96NT3 240 aa20.27■□□□□ 0.84
CHGA-206ENST00000556876 A1CFQ9NQ94 594 aaKnown RBP20.27■□□□□ 0.84
CHGA-206ENST00000556876 Q9Y3F1 56 aa20.27■□□□□ 0.84
CHGA-206ENST00000556876 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.26■□□□□ 0.83
CHGA-206ENST00000556876 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.26■□□□□ 0.83
CHGA-206ENST00000556876 ARVCFO00192 962 aa20.26■□□□□ 0.83
CHGA-206ENST00000556876 MFAP1P55081 439 aaKnown RBP20.26■□□□□ 0.83
CHGA-206ENST00000556876 RRP1P56182 461 aaKnown RBP20.26■□□□□ 0.83
CHGA-206ENST00000556876 TNFAIP2Q03169 654 aa20.26■□□□□ 0.83
CHGA-206ENST00000556876 PPIGQ13427 754 aaKnown RBP eCLIP20.26■□□□□ 0.83
CHGA-206ENST00000556876 MCMDC2Q4G0Z9 681 aa20.26■□□□□ 0.83
CHGA-206ENST00000556876 MFSD5Q6N075 450 aa20.26■□□□□ 0.83
CHGA-206ENST00000556876 NOL8Q76FK4 1167 aaKnown RBP20.26■□□□□ 0.83
CHGA-206ENST00000556876 TMEM199Q8N511 208 aa20.26■□□□□ 0.83
CHGA-206ENST00000556876 AP5M1Q9H0R1 490 aa20.26■□□□□ 0.83
CHGA-206ENST00000556876 TCP11L1Q9NUJ3 509 aa20.26■□□□□ 0.83
CHGA-206ENST00000556876 ADD3Q9UEY8 706 aaKnown RBP20.26■□□□□ 0.83
CHGA-206ENST00000556876 PARP14Q460N5 1801 aa20.25■□□□□ 0.83
CHGA-206ENST00000556876 ALAS1P13196 640 aa20.25■□□□□ 0.83
CHGA-206ENST00000556876 OTUD7AQ8TE49 926 aaPredicted RBP20.25■□□□□ 0.83
CHGA-206ENST00000556876 LENG1Q96BZ8 264 aaPredicted RBP20.25■□□□□ 0.83
CHGA-206ENST00000556876 AGBL1Q96MI9 1066 aa20.25■□□□□ 0.83
CHGA-206ENST00000556876 TTC14Q96N46 770 aa20.25■□□□□ 0.83
CHGA-206ENST00000556876 MPHOSPH6Q99547 160 aaKnown RBP20.25■□□□□ 0.83
CHGA-206ENST00000556876 TBX21Q9UL17 535 aa20.25■□□□□ 0.83
CHGA-206ENST00000556876 PRR12Q9ULL5 1215 aa20.25■□□□□ 0.83
CHGA-206ENST00000556876 ZNFX1Q9P2E3 1918 aaKnown RBP20.25■□□□□ 0.83
CHGA-206ENST00000556876 SALL3Q9BXA9 1300 aa20.25■□□□□ 0.83
CHGA-206ENST00000556876 ICAM1P05362 532 aa20.24■□□□□ 0.83
CHGA-206ENST00000556876 TOP1P11387 765 aaKnown RBP20.24■□□□□ 0.83
CHGA-206ENST00000556876 PDE1AP54750 535 aa20.24■□□□□ 0.83
CHGA-206ENST00000556876 FGD4Q96M96 766 aa20.24■□□□□ 0.83
CHGA-206ENST00000556876 CDX2Q99626 313 aaPredicted RBP20.24■□□□□ 0.83
CHGA-206ENST00000556876 IL17RBQ9NRM6 502 aa20.24■□□□□ 0.83
CHGA-206ENST00000556876 ZNF536O15090 1300 aa20.24■□□□□ 0.83
CHGA-206ENST00000556876 ZMYM6O95789 1325 aa20.24■□□□□ 0.83
CHGA-206ENST00000556876 ITGB8P26012 769 aa20.23■□□□□ 0.83
CHGA-206ENST00000556876 CNTN2Q02246 1040 aa20.23■□□□□ 0.83
CHGA-206ENST00000556876 CTDSPL2Q05D32 466 aa20.23■□□□□ 0.83
CHGA-206ENST00000556876 BTNL9Q6UXG8 535 aa20.23■□□□□ 0.83
CHGA-206ENST00000556876 KCTD1Q719H9 257 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms