RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-222	ENST00000556778	CCDC96	Q2M329	555 aa		10.34	□□□□□ -0.75
PRKCH-222	ENST00000556778	SLC35G1	Q2M3R5	365 aa		10.34	□□□□□ -0.75
PRKCH-222	ENST00000556778	C8orf34	Q49A92	452 aa		10.34	□□□□□ -0.75
PRKCH-222	ENST00000556778	TMEM67	Q5HYA8	995 aa		10.34	□□□□□ -0.75
PRKCH-222	ENST00000556778	IFIT1B	Q5T764	474 aa	Known RBP	10.34	□□□□□ -0.75
PRKCH-222	ENST00000556778	TNS4	Q8IZW8	715 aa		10.34	□□□□□ -0.75
PRKCH-222	ENST00000556778	CPXCR1	Q8N123	301 aa		10.34	□□□□□ -0.75
PRKCH-222	ENST00000556778	STAG2	Q8N3U4	1231 aa		10.34	□□□□□ -0.75
PRKCH-222	ENST00000556778	PNMA1	Q8ND90	353 aa		10.34	□□□□□ -0.75
PRKCH-222	ENST00000556778	KCNV2	Q8TDN2	545 aa		10.34	□□□□□ -0.75
PRKCH-222	ENST00000556778	NEK1	Q96PY6	1258 aa		10.34	□□□□□ -0.75
PRKCH-222	ENST00000556778	SLF1	Q9BQI6	1058 aa		10.34	□□□□□ -0.75
PRKCH-222	ENST00000556778	MOV10L1	Q9BXT6	1211 aa	Known RBP	10.34	□□□□□ -0.75
PRKCH-222	ENST00000556778	KAT14	Q9H8E8	782 aa		10.34	□□□□□ -0.75
PRKCH-222	ENST00000556778	LY9	Q9HBG7	655 aa		10.34	□□□□□ -0.75
PRKCH-222	ENST00000556778	RAVER2	Q9HCJ3	691 aa	Known RBP	10.34	□□□□□ -0.75
PRKCH-222	ENST00000556778	GJD2	Q9UKL4	321 aa		10.34	□□□□□ -0.75
PRKCH-222	ENST00000556778	PRR12	Q9ULL5	1215 aa		10.34	□□□□□ -0.75
PRKCH-222	ENST00000556778	PTPN22	Q9Y2R2	807 aa		10.34	□□□□□ -0.75
PRKCH-222	ENST00000556778	RABGAP1	Q9Y3P9	1069 aa		10.34	□□□□□ -0.75
PRKCH-222	ENST00000556778	PTCH2	Q9Y6C5	1203 aa		10.34	□□□□□ -0.75
PRKCH-222	ENST00000556778	SH2B2	O14492	632 aa	Predicted RBP	10.33	□□□□□ -0.76
PRKCH-222	ENST00000556778	TNPO2	O14787	897 aa	Known RBP	10.33	□□□□□ -0.76
PRKCH-222	ENST00000556778	REC8	O95072	547 aa		10.33	□□□□□ -0.76
PRKCH-222	ENST00000556778	MYC	P01106	439 aa	Predicted RBP	10.33	□□□□□ -0.76
PRKCH-222	ENST00000556778	SNHG28	P0DPA3	235 aa		10.33	□□□□□ -0.76
PRKCH-222	ENST00000556778	ERCC3	P19447	782 aa		10.33	□□□□□ -0.76
PRKCH-222	ENST00000556778	RXRA	P19793	462 aa		10.33	□□□□□ -0.76
PRKCH-222	ENST00000556778	MCM5	P33992	734 aa		10.33	□□□□□ -0.76
PRKCH-222	ENST00000556778	FLT3LG	P49771	235 aa		10.33	□□□□□ -0.76
PRKCH-222	ENST00000556778	FCGRT	P55899	365 aa		10.33	□□□□□ -0.76
PRKCH-222	ENST00000556778	ZNF543	Q08ER8	600 aa		10.33	□□□□□ -0.76
PRKCH-222	ENST00000556778	IK	Q13123	557 aa	Predicted RBP	10.33	□□□□□ -0.76
PRKCH-222	ENST00000556778	TSGA10IP	Q3SY00	556 aa		10.33	□□□□□ -0.76
PRKCH-222	ENST00000556778	WDR78	Q5VTH9	848 aa		10.33	□□□□□ -0.76
PRKCH-222	ENST00000556778	RNF20	Q5VTR2	975 aa		10.33	□□□□□ -0.76
PRKCH-222	ENST00000556778	CCDC174	Q6PII3	467 aa		10.33	□□□□□ -0.76
PRKCH-222	ENST00000556778	NBPF11	Q86T75	865 aa		10.33	□□□□□ -0.76
PRKCH-222	ENST00000556778	PRPF38A	Q8NAV1	312 aa	Known RBP	10.33	□□□□□ -0.76
PRKCH-222	ENST00000556778	AGBL1	Q96MI9	1066 aa		10.33	□□□□□ -0.76
PRKCH-222	ENST00000556778	JAKMIP1	Q96N16	626 aa	Known RBP	10.33	□□□□□ -0.76
PRKCH-222	ENST00000556778	SPATC1L	Q9H0A9	340 aa		10.33	□□□□□ -0.76
PRKCH-222	ENST00000556778	VAT1L	Q9HCJ6	419 aa		10.33	□□□□□ -0.76
PRKCH-222	ENST00000556778	SRRD	Q9UH36	339 aa		10.33	□□□□□ -0.76
PRKCH-222	ENST00000556778	FEM1B	Q9UK73	627 aa		10.33	□□□□□ -0.76
PRKCH-222	ENST00000556778	ZNF214	Q9UL59	606 aa	Predicted RBP	10.33	□□□□□ -0.76
PRKCH-222	ENST00000556778	BRPF3	Q9ULD4	1205 aa		10.33	□□□□□ -0.76
PRKCH-222	ENST00000556778	SYNPO2	Q9UMS6	1093 aa		10.33	□□□□□ -0.76
PRKCH-222	ENST00000556778	ZNF536	O15090	1300 aa		10.33	□□□□□ -0.76
PRKCH-222	ENST00000556778	STAT2	P52630	851 aa		10.32	□□□□□ -0.76
PRKCH-222	ENST00000556778	KIF22	Q14807	665 aa		10.32	□□□□□ -0.76
PRKCH-222	ENST00000556778	WTAP	Q15007	396 aa		10.32	□□□□□ -0.76
PRKCH-222	ENST00000556778	GPR142	Q7Z601	462 aa		10.32	□□□□□ -0.76
PRKCH-222	ENST00000556778	NCAPG2	Q86XI2	1143 aa		10.32	□□□□□ -0.76
PRKCH-222	ENST00000556778	CCDC144CP	Q8IYA2	1237 aa		10.32	□□□□□ -0.76
PRKCH-222	ENST00000556778	CMTR1	Q8N1G2	835 aa	Known RBP	10.32	□□□□□ -0.76
PRKCH-222	ENST00000556778	SH3TC2	Q8TF17	1288 aa		10.32	□□□□□ -0.76
PRKCH-222	ENST00000556778	DCAF4	Q8WV16	495 aa		10.32	□□□□□ -0.76
PRKCH-222	ENST00000556778	SLC38A10	Q9HBR0	1119 aa		10.32	□□□□□ -0.76
PRKCH-222	ENST00000556778	HPS5	Q9UPZ3	1129 aa		10.32	□□□□□ -0.76
PRKCH-222	ENST00000556778	ZBED4	O75132	1171 aa		10.31	□□□□□ -0.76
PRKCH-222	ENST00000556778	ELN	P15502	786 aa		10.31	□□□□□ -0.76
PRKCH-222	ENST00000556778	ZKSCAN1	P17029	563 aa	Predicted RBP	10.31	□□□□□ -0.76
PRKCH-222	ENST00000556778	CYP2B6	P20813	491 aa		10.31	□□□□□ -0.76
PRKCH-222	ENST00000556778	STAT3	P40763	770 aa		10.31	□□□□□ -0.76
PRKCH-222	ENST00000556778	TROAP	Q12815	778 aa		10.31	□□□□□ -0.76
PRKCH-222	ENST00000556778	TRIM32	Q13049	653 aa		10.31	□□□□□ -0.76
PRKCH-222	ENST00000556778	CCL14	Q16627	93 aa		10.31	□□□□□ -0.76
PRKCH-222	ENST00000556778	CCDC178	Q5BJE1	867 aa		10.31	□□□□□ -0.76
PRKCH-222	ENST00000556778	DHX32	Q7L7V1	743 aa	Known RBP	10.31	□□□□□ -0.76
PRKCH-222	ENST00000556778	NUP133	Q8WUM0	1156 aa		10.31	□□□□□ -0.76
PRKCH-222	ENST00000556778	ABHD8	Q96I13	439 aa		10.31	□□□□□ -0.76
PRKCH-222	ENST00000556778	UPF3B	Q9BZI7	483 aa	Known RBP	10.31	□□□□□ -0.76
PRKCH-222	ENST00000556778	HOMER2	Q9NSB8	354 aa		10.31	□□□□□ -0.76
PRKCH-222	ENST00000556778	MAD2L2	Q9UI95	211 aa		10.31	□□□□□ -0.76
PRKCH-222	ENST00000556778	PCDHGA10	Q9Y5H3	936 aa		10.31	□□□□□ -0.76
PRKCH-222	ENST00000556778	MYPN	Q86TC9	1320 aa		10.31	□□□□□ -0.76
PRKCH-222	ENST00000556778	LAMB1	P07942	1786 aa		10.3	□□□□□ -0.76
PRKCH-222	ENST00000556778	ERICH2	A1L162	156 aa		10.3	□□□□□ -0.76
PRKCH-222	ENST00000556778	PALM3	A6NDB9	673 aa	Predicted RBP	10.3	□□□□□ -0.76
PRKCH-222	ENST00000556778	DTNB	O60941	627 aa		10.3	□□□□□ -0.76
PRKCH-222	ENST00000556778	COBL	O75128	1261 aa		10.3	□□□□□ -0.76
PRKCH-222	ENST00000556778	PGK2	P07205	417 aa		10.3	□□□□□ -0.76
PRKCH-222	ENST00000556778	PARP1	P09874	1014 aa	Known RBP	10.3	□□□□□ -0.76
PRKCH-222	ENST00000556778	PTPRE	P23469	700 aa		10.3	□□□□□ -0.76
PRKCH-222	ENST00000556778	LSM11	P83369	360 aa	Known RBP eCLIP	10.3	□□□□□ -0.76
PRKCH-222	ENST00000556778	MORN1	Q5T089	497 aa		10.3	□□□□□ -0.76
PRKCH-222	ENST00000556778	SYDE2	Q5VT97	1194 aa		10.3	□□□□□ -0.76
PRKCH-222	ENST00000556778	SNRNP48	Q6IEG0	339 aa	Known RBP	10.3	□□□□□ -0.76
PRKCH-222	ENST00000556778	FBXO46	Q6PJ61	603 aa	Predicted RBP	10.3	□□□□□ -0.76
PRKCH-222	ENST00000556778	BTNL9	Q6UXG8	535 aa		10.3	□□□□□ -0.76
PRKCH-222	ENST00000556778	NFXL1	Q6ZNB6	911 aa		10.3	□□□□□ -0.76
PRKCH-222	ENST00000556778		Q6ZUG5	572 aa		10.3	□□□□□ -0.76
PRKCH-222	ENST00000556778	PLEKHH3	Q7Z736	793 aa		10.3	□□□□□ -0.76
PRKCH-222	ENST00000556778	FAM160B2	Q86V87	743 aa		10.3	□□□□□ -0.76
PRKCH-222	ENST00000556778	RIOX2	Q8IUF8	465 aa		10.3	□□□□□ -0.76
PRKCH-222	ENST00000556778	SPNS2	Q8IVW8	549 aa		10.3	□□□□□ -0.76
PRKCH-222	ENST00000556778	CCAR1	Q8IX12	1150 aa	Known RBP	10.3	□□□□□ -0.76
PRKCH-222	ENST00000556778	ADGRF4	Q8IZF3	695 aa		10.3	□□□□□ -0.76
PRKCH-222	ENST00000556778	MB21D1	Q8N884	522 aa		10.3	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms