RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 TTC14Q96N46 770 aa12.16□□□□□ -0.46
SHMT2-224ENST00000556737 ZKSCAN3Q9BRR0 538 aa12.16□□□□□ -0.46
SHMT2-224ENST00000556737 TINF2Q9BSI4 451 aa12.16□□□□□ -0.46
SHMT2-224ENST00000556737 RANBP17Q9H2T7 1088 aaKnown RBP12.16□□□□□ -0.46
SHMT2-224ENST00000556737 HOMER2Q9NSB8 354 aa12.16□□□□□ -0.46
SHMT2-224ENST00000556737 FBXO40Q9UH90 709 aa12.16□□□□□ -0.46
SHMT2-224ENST00000556737 TAF6LQ9Y6J9 622 aa12.16□□□□□ -0.46
SHMT2-224ENST00000556737 ASTN1O14525 1302 aa12.15□□□□□ -0.46
SHMT2-224ENST00000556737 SYNGAP1Q96PV0 1343 aa12.15□□□□□ -0.46
SHMT2-224ENST00000556737 ZNF865P0CJ78 1059 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-224ENST00000556737 CNGA1P29973 690 aa12.15□□□□□ -0.46
SHMT2-224ENST00000556737 SLC16A2P36021 539 aa12.15□□□□□ -0.46
SHMT2-224ENST00000556737 ZNF543Q08ER8 600 aa12.15□□□□□ -0.46
SHMT2-224ENST00000556737 SYDE2Q5VT97 1194 aa12.15□□□□□ -0.46
SHMT2-224ENST00000556737 ANO1Q5XXA6 986 aa12.15□□□□□ -0.46
SHMT2-224ENST00000556737 CCDC174Q6PII3 467 aa12.15□□□□□ -0.46
SHMT2-224ENST00000556737 MAMDC4Q6UXC1 1216 aa12.15□□□□□ -0.46
SHMT2-224ENST00000556737 ZNF467Q7Z7K2 595 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-224ENST00000556737 DGKHQ86XP1 1220 aa12.15□□□□□ -0.46
SHMT2-224ENST00000556737 ENAHQ8N8S7 591 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-224ENST00000556737 ANKS1AQ92625 1134 aa12.15□□□□□ -0.46
SHMT2-224ENST00000556737 PRO3102Q9H379 93 aa12.15□□□□□ -0.46
SHMT2-224ENST00000556737 ACAD9Q9H845 621 aa12.15□□□□□ -0.46
SHMT2-224ENST00000556737 A1CFQ9NQ94 594 aaKnown RBP12.15□□□□□ -0.46
SHMT2-224ENST00000556737 RNF146Q9NTX7 359 aa12.15□□□□□ -0.46
SHMT2-224ENST00000556737 NRBP1Q9UHY1 535 aa12.15□□□□□ -0.46
SHMT2-224ENST00000556737 CTNNA3Q9UI47 895 aa12.15□□□□□ -0.46
SHMT2-224ENST00000556737 CTDP1Q9Y5B0 961 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-224ENST00000556737 DNAH12Q6ZR08 3092 aa12.15□□□□□ -0.46
SHMT2-224ENST00000556737 TNKSO95271 1327 aa12.14□□□□□ -0.47
SHMT2-224ENST00000556737 LTBP2Q14767 1821 aa12.14□□□□□ -0.47
SHMT2-224ENST00000556737 DNM1LO00429 736 aa12.14□□□□□ -0.47
SHMT2-224ENST00000556737 EVI5O60447 810 aa12.14□□□□□ -0.47
SHMT2-224ENST00000556737 CYP21A2P08686 494 aa12.14□□□□□ -0.47
SHMT2-224ENST00000556737 SLC4A3P48751 1232 aa12.14□□□□□ -0.47
SHMT2-224ENST00000556737 TKFCQ3LXA3 575 aa12.14□□□□□ -0.47
SHMT2-224ENST00000556737 MUM1L1Q5H9M0 696 aa12.14□□□□□ -0.47
SHMT2-224ENST00000556737 CENPQQ7L2Z9 268 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-224ENST00000556737 MSL3Q8N5Y2 521 aaKnown RBP12.14□□□□□ -0.47
SHMT2-224ENST00000556737 FAM133AQ8N9E0 248 aa12.14□□□□□ -0.47
SHMT2-224ENST00000556737 RUFY2Q8WXA3 655 aa12.14□□□□□ -0.47
SHMT2-224ENST00000556737 LENG1Q96BZ8 264 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-224ENST00000556737 GPCPD1Q9NPB8 672 aa12.14□□□□□ -0.47
SHMT2-224ENST00000556737 COLQQ9Y215 455 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-224ENST00000556737 ADCY6O43306 1168 aa12.13□□□□□ -0.47
SHMT2-224ENST00000556737 SNAI1O95863 264 aaPredicted RBP12.13□□□□□ -0.47
SHMT2-224ENST00000556737 ICAM1P05362 532 aa12.13□□□□□ -0.47
SHMT2-224ENST00000556737 ALAS1P13196 640 aa12.13□□□□□ -0.47
SHMT2-224ENST00000556737 CNTN2Q02246 1040 aa12.13□□□□□ -0.47
SHMT2-224ENST00000556737 LRRC26Q2I0M4 334 aa12.13□□□□□ -0.47
SHMT2-224ENST00000556737 HABP4Q5JVS0 413 aaKnown RBP12.13□□□□□ -0.47
SHMT2-224ENST00000556737 CHRDL2Q6WN34 429 aa12.13□□□□□ -0.47
SHMT2-224ENST00000556737 STOX1Q6ZVD7 989 aa12.13□□□□□ -0.47
SHMT2-224ENST00000556737 CYB5R4Q7L1T6 521 aa12.13□□□□□ -0.47
SHMT2-224ENST00000556737 C7orf61Q8IZ16 206 aa12.13□□□□□ -0.47
SHMT2-224ENST00000556737 ANKRD35Q8N283 1001 aa12.13□□□□□ -0.47
SHMT2-224ENST00000556737 PNMA1Q8ND90 353 aa12.13□□□□□ -0.47
SHMT2-224ENST00000556737 DDX11Q96FC9 970 aa12.13□□□□□ -0.47
SHMT2-224ENST00000556737 TRERF1Q96PN7 1200 aa12.13□□□□□ -0.47
SHMT2-224ENST00000556737 ZSCAN10Q96SZ4 725 aaPredicted RBP12.13□□□□□ -0.47
SHMT2-224ENST00000556737 KATNBL1Q9H079 304 aa12.13□□□□□ -0.47
SHMT2-224ENST00000556737 CNNM2Q9H8M5 875 aa12.13□□□□□ -0.47
SHMT2-224ENST00000556737 ZSWIM5Q9P217 1185 aa12.13□□□□□ -0.47
SHMT2-224ENST00000556737 CCPG1Q9ULG6 757 aa12.13□□□□□ -0.47
SHMT2-224ENST00000556737 NR2E3Q9Y5X4 410 aa12.13□□□□□ -0.47
SHMT2-224ENST00000556737 SOWAHBA6NEL2 793 aa12.12□□□□□ -0.47
SHMT2-224ENST00000556737 GOLGA8HP0CJ92 632 aa12.12□□□□□ -0.47
SHMT2-224ENST00000556737 AKR1A1P14550 325 aa12.12□□□□□ -0.47
SHMT2-224ENST00000556737 SEC23AQ15436 765 aa12.12□□□□□ -0.47
SHMT2-224ENST00000556737 CCDC178Q5BJE1 867 aa12.12□□□□□ -0.47
SHMT2-224ENST00000556737 GJC2Q5T442 439 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-224ENST00000556737 IQCA1Q86XH1 822 aa12.12□□□□□ -0.47
SHMT2-224ENST00000556737 KRT23Q9C075 422 aa12.12□□□□□ -0.47
SHMT2-224ENST00000556737 CPVLQ9H3G5 476 aa12.12□□□□□ -0.47
SHMT2-224ENST00000556737 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-224ENST00000556737 CYP39A1Q9NYL5 469 aa12.12□□□□□ -0.47
SHMT2-224ENST00000556737 PCDH10Q9P2E7 1040 aa12.12□□□□□ -0.47
SHMT2-224ENST00000556737 U3KPZ7 1027 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-224ENST00000556737 WDR19Q8NEZ3 1342 aa12.11□□□□□ -0.47
SHMT2-224ENST00000556737 SYNRGQ9UMZ2 1314 aa12.11□□□□□ -0.47
SHMT2-224ENST00000556737 NFIBO00712 420 aa12.11□□□□□ -0.47
SHMT2-224ENST00000556737 ADAMTS4O75173 837 aa12.11□□□□□ -0.47
SHMT2-224ENST00000556737 LRRC41Q15345 812 aa12.11□□□□□ -0.47
SHMT2-224ENST00000556737 BMP2KLQ5H9B9 411 aa12.11□□□□□ -0.47
SHMT2-224ENST00000556737 GPATCH4Q5T3I0 446 aaKnown RBP12.11□□□□□ -0.47
SHMT2-224ENST00000556737 ARMCX2Q7L311 632 aa12.11□□□□□ -0.47
SHMT2-224ENST00000556737 CLEC4DQ8WXI8 215 aa12.11□□□□□ -0.47
SHMT2-224ENST00000556737 MAP4K1Q92918 833 aa12.11□□□□□ -0.47
SHMT2-224ENST00000556737 LSG1Q9H089 658 aaKnown RBP12.11□□□□□ -0.47
SHMT2-224ENST00000556737 KAT14Q9H8E8 782 aa12.11□□□□□ -0.47
SHMT2-224ENST00000556737 XPNPEP3Q9NQH7 507 aa12.11□□□□□ -0.47
SHMT2-224ENST00000556737 CNPY2Q9Y2B0 182 aa12.11□□□□□ -0.47
SHMT2-224ENST00000556737 DDX49Q9Y6V7 483 aaKnown RBP12.11□□□□□ -0.47
SHMT2-224ENST00000556737 LAMA3Q16787 3333 aa12.11□□□□□ -0.47
SHMT2-224ENST00000556737 MYH6P13533 1939 aa12.1□□□□□ -0.47
SHMT2-224ENST00000556737 KBTBD13C9JR72 458 aa12.1□□□□□ -0.47
SHMT2-224ENST00000556737 E7EWF7 191 aa12.1□□□□□ -0.47
SHMT2-224ENST00000556737 POTEB2H3BUK9 544 aa12.1□□□□□ -0.47
SHMT2-224ENST00000556737 RARBP10826 455 aa12.1□□□□□ -0.47
SHMT2-224ENST00000556737 SNX17Q15036 470 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms