RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 INCENPQ9NQS7 918 aa5.32□□□□□ -1.56
ATXN3-242ENST00000556644 TRMT13Q9NUP7 481 aaKnown RBP5.32□□□□□ -1.56
ATXN3-242ENST00000556644 NRBP1Q9UHY1 535 aa5.32□□□□□ -1.56
ATXN3-242ENST00000556644 CD207Q9UJ71 328 aa5.32□□□□□ -1.56
ATXN3-242ENST00000556644 FAM184BQ9ULE4 1060 aa5.32□□□□□ -1.56
ATXN3-242ENST00000556644 ASH1LQ9NR48 2969 aaKnown RBP5.32□□□□□ -1.56
ATXN3-242ENST00000556644 SIP14410 1827 aa5.32□□□□□ -1.56
ATXN3-242ENST00000556644 OTOGLQ3ZCN5 2332 aa5.31□□□□□ -1.56
ATXN3-242ENST00000556644 MYH2Q9UKX2 1941 aa5.31□□□□□ -1.56
ATXN3-242ENST00000556644 MYH13Q9UKX3 1938 aa5.31□□□□□ -1.56
ATXN3-242ENST00000556644 TNKSO95271 1327 aa5.31□□□□□ -1.56
ATXN3-242ENST00000556644 MROH5Q6ZUA9 1318 aa5.31□□□□□ -1.56
ATXN3-242ENST00000556644 LOC730098B7Z3J9 87 aa5.31□□□□□ -1.56
ATXN3-242ENST00000556644 CTAGE5O15320 804 aa5.31□□□□□ -1.56
ATXN3-242ENST00000556644 DUSP11O75319 330 aaKnown RBP5.31□□□□□ -1.56
ATXN3-242ENST00000556644 FCER1AP12319 257 aa5.31□□□□□ -1.56
ATXN3-242ENST00000556644 SP100P23497 879 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-242ENST00000556644 NUBP1P53384 320 aa5.31□□□□□ -1.56
ATXN3-242ENST00000556644 RHBDL3P58872 404 aa5.31□□□□□ -1.56
ATXN3-242ENST00000556644 WDR5P61964 334 aaKnown RBP5.31□□□□□ -1.56
ATXN3-242ENST00000556644 COL19A1Q14993 1142 aa5.31□□□□□ -1.56
ATXN3-242ENST00000556644 PTPROQ16827 1216 aa5.31□□□□□ -1.56
ATXN3-242ENST00000556644 LBX2Q6XYB7 198 aa5.31□□□□□ -1.56
ATXN3-242ENST00000556644 SPNS2Q8IVW8 549 aa5.31□□□□□ -1.56
ATXN3-242ENST00000556644 CCDC146Q8IYE0 955 aa5.31□□□□□ -1.56
ATXN3-242ENST00000556644 C8orf58Q8NAV2 365 aa5.31□□□□□ -1.56
ATXN3-242ENST00000556644 ACER1Q8TDN7 264 aa5.31□□□□□ -1.56
ATXN3-242ENST00000556644 MMP19Q99542 508 aa5.31□□□□□ -1.56
ATXN3-242ENST00000556644 SMOC2Q9H3U7 446 aa5.31□□□□□ -1.56
ATXN3-242ENST00000556644 NSUN3Q9H649 340 aaKnown RBP5.31□□□□□ -1.56
ATXN3-242ENST00000556644 SPC25Q9HBM1 224 aa5.31□□□□□ -1.56
ATXN3-242ENST00000556644 TET1Q8NFU7 2136 aa5.3□□□□□ -1.56
ATXN3-242ENST00000556644 SIPA1L1O43166 1804 aa5.3□□□□□ -1.56
ATXN3-242ENST00000556644 PDE8BO95263 885 aa5.3□□□□□ -1.56
ATXN3-242ENST00000556644 SNAI1O95863 264 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-242ENST00000556644 GH2P01242 217 aa5.3□□□□□ -1.56
ATXN3-242ENST00000556644 IFIT1P09914 478 aaKnown RBP5.3□□□□□ -1.56
ATXN3-242ENST00000556644 GJA9P57773 515 aa5.3□□□□□ -1.56
ATXN3-242ENST00000556644 HYAL1Q12794 435 aa5.3□□□□□ -1.56
ATXN3-242ENST00000556644 GPM6BQ13491 265 aa5.3□□□□□ -1.56
ATXN3-242ENST00000556644 ANGPT1Q15389 498 aa5.3□□□□□ -1.56
ATXN3-242ENST00000556644 PTPN21Q16825 1174 aa5.3□□□□□ -1.56
ATXN3-242ENST00000556644 TCTN1Q2MV58 587 aa5.3□□□□□ -1.56
ATXN3-242ENST00000556644 ZNF792Q3KQV3 632 aa5.3□□□□□ -1.56
ATXN3-242ENST00000556644 CCDC30Q5VVM6 783 aa5.3□□□□□ -1.56
ATXN3-242ENST00000556644 NOL8Q76FK4 1167 aaKnown RBP5.3□□□□□ -1.56
ATXN3-242ENST00000556644 LURAP1LQ8IV03 231 aa5.3□□□□□ -1.56
ATXN3-242ENST00000556644 MIER1Q8N108 512 aa5.3□□□□□ -1.56
ATXN3-242ENST00000556644 VGLL2Q8N8G2 317 aa5.3□□□□□ -1.56
ATXN3-242ENST00000556644 SLC43A3Q8NBI5 491 aa5.3□□□□□ -1.56
ATXN3-242ENST00000556644 KLHDC4Q8TBB5 520 aa5.3□□□□□ -1.56
ATXN3-242ENST00000556644 C12orf42Q96LP6 360 aa5.3□□□□□ -1.56
ATXN3-242ENST00000556644 TRIM34Q9BYJ4 488 aa5.3□□□□□ -1.56
ATXN3-242ENST00000556644 TANGO6Q9C0B7 1094 aa5.3□□□□□ -1.56
ATXN3-242ENST00000556644 UPF3AQ9H1J1 476 aaKnown RBP5.3□□□□□ -1.56
ATXN3-242ENST00000556644 SCUBE2Q9NQ36 999 aa5.3□□□□□ -1.56
ATXN3-242ENST00000556644 ABCF2Q9UG63 623 aa5.3□□□□□ -1.56
ATXN3-242ENST00000556644 HERC5Q9UII4 1024 aaKnown RBP5.3□□□□□ -1.56
ATXN3-242ENST00000556644 METRNQ9UJH8 293 aa5.3□□□□□ -1.56
ATXN3-242ENST00000556644 TRIM35Q9UPQ4 493 aa5.3□□□□□ -1.56
ATXN3-242ENST00000556644 FARP1Q9Y4F1 1045 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-242ENST00000556644 MROH7-TTC4A0A0A0MT08 1334 aa5.29□□□□□ -1.56
ATXN3-242ENST00000556644 ASTN1O14525 1302 aa5.29□□□□□ -1.56
ATXN3-242ENST00000556644 CDK5RAP2Q96SN8 1893 aa5.29□□□□□ -1.56
ATXN3-242ENST00000556644 E9PSI1 815 aa5.29□□□□□ -1.56
ATXN3-242ENST00000556644 GJB5O95377 273 aa5.29□□□□□ -1.56
ATXN3-242ENST00000556644 NDUFV1P49821 464 aa5.29□□□□□ -1.56
ATXN3-242ENST00000556644 RRP1P56182 461 aaKnown RBP5.29□□□□□ -1.56
ATXN3-242ENST00000556644 CBX2Q14781 532 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-242ENST00000556644 RAB3GAP1Q15042 981 aa5.29□□□□□ -1.56
ATXN3-242ENST00000556644 CTC1Q2NKJ3 1217 aa5.29□□□□□ -1.56
ATXN3-242ENST00000556644 CCDC144BQ3MJ40 725 aa5.29□□□□□ -1.56
ATXN3-242ENST00000556644 EPC2Q52LR7 807 aa5.29□□□□□ -1.56
ATXN3-242ENST00000556644 ASTLQ6HA08 431 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-242ENST00000556644 ABRAQ8N0Z2 381 aa5.29□□□□□ -1.56
ATXN3-242ENST00000556644 TSPYL6Q8N831 410 aa5.29□□□□□ -1.56
ATXN3-242ENST00000556644 LINS1Q8NG48 757 aa5.29□□□□□ -1.56
ATXN3-242ENST00000556644 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.29□□□□□ -1.56
ATXN3-242ENST00000556644 DNAAF4Q8WXU2 420 aa5.29□□□□□ -1.56
ATXN3-242ENST00000556644 RUBCNQ92622 972 aa5.29□□□□□ -1.56
ATXN3-242ENST00000556644 ATG4CQ96DT6 458 aa5.29□□□□□ -1.56
ATXN3-242ENST00000556644 RAD9AQ99638 391 aa5.29□□□□□ -1.56
ATXN3-242ENST00000556644 ALDH8A1Q9H2A2 487 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-242ENST00000556644 MROH8Q9H579 483 aa5.29□□□□□ -1.56
ATXN3-242ENST00000556644 IGSF5Q9NSI5 407 aa5.29□□□□□ -1.56
ATXN3-242ENST00000556644 CTNNA3Q9UI47 895 aa5.29□□□□□ -1.56
ATXN3-242ENST00000556644 CDV3Q9UKY7 258 aaKnown RBP5.29□□□□□ -1.56
ATXN3-242ENST00000556644 USP15Q9Y4E8 981 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-242ENST00000556644 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-242ENST00000556644 PI15O43692 258 aa5.28□□□□□ -1.56
ATXN3-242ENST00000556644 BAIAP3O94812 1187 aa5.28□□□□□ -1.56
ATXN3-242ENST00000556644 IQCF3P0C7M6 154 aa5.28□□□□□ -1.56
ATXN3-242ENST00000556644 FGFR2P21802 821 aa5.28□□□□□ -1.56
ATXN3-242ENST00000556644 ICAM3P32942 547 aa5.28□□□□□ -1.56
ATXN3-242ENST00000556644 PHKA1P46020 1223 aa5.28□□□□□ -1.56
ATXN3-242ENST00000556644 ACVR2BQ13705 512 aa5.28□□□□□ -1.56
ATXN3-242ENST00000556644 PUM3Q15397 648 aaKnown RBP5.28□□□□□ -1.56
ATXN3-242ENST00000556644 FAM47CQ5HY64 1035 aa5.28□□□□□ -1.56
ATXN3-242ENST00000556644 PPM1JQ5JR12 505 aa5.28□□□□□ -1.56
ATXN3-242ENST00000556644 TMEM63BQ5T3F8 832 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms