RNA–Protein interactions for RNA: ENST00000556631.1

KTN1-224, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 5,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-224ENST00000556631 RARSP54136 660 aaKnown RBP2.04□□□□□ -2.08
KTN1-224ENST00000556631 TRPC3Q13507 836 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 MTMR3Q13615 1198 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 SLC12A1Q13621 1099 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 SPA17Q15506 151 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 GNASQ5JWF2 1037 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 KAZNQ674X7 775 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 LHX8Q68G74 356 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 TMEM214Q6NUQ4 689 aaKnown RBP2.04□□□□□ -2.08
KTN1-224ENST00000556631 C16orf46Q6P387 395 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 CASC4Q6P4E1 433 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 ANO5Q75V66 913 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 CENPQQ7L2Z9 268 aaPredicted RBP2.04□□□□□ -2.08
KTN1-224ENST00000556631 PHLDB2Q86SQ0 1253 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 GABPB2Q8TAK5 448 aaPredicted RBP2.04□□□□□ -2.08
KTN1-224ENST00000556631 STAG1Q8WVM7 1258 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 TP53INP1Q96A56 240 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 EFHD1Q9BUP0 239 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 VPS11Q9H270 941 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 ZSWIM6Q9HCJ5 1215 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 TEKT2Q9UIF3 430 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 FBXL21Q9UKT6 434 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 BAG5Q9UL15 447 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 TRIM35Q9UPQ4 493 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 A0A087WZG4 1122 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 FRMD3A2A2Y4 597 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 A8MV72 311 aaPredicted RBP2.04□□□□□ -2.08
KTN1-224ENST00000556631 FOXN3O00409 490 aaPredicted RBP2.04□□□□□ -2.08
KTN1-224ENST00000556631 APOL1O14791 398 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 CPNE3O75131 537 aaKnown RBP2.04□□□□□ -2.08
KTN1-224ENST00000556631 PPFIA4O75335 1185 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 SERPINI2O75830 405 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 PGM3O95394 542 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 ALDH1A1P00352 501 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 FGFR1P11362 822 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 TATP17735 454 aaPredicted RBP2.04□□□□□ -2.08
KTN1-224ENST00000556631 ATP5DP30049 168 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 NEK3P51956 506 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 CABP4P57796 275 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 MRPS9P82933 396 aaKnown RBP2.04□□□□□ -2.08
KTN1-224ENST00000556631 UBE3AQ05086 875 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 ARSJQ5FYB0 599 aaPredicted RBP2.04□□□□□ -2.08
KTN1-224ENST00000556631 FKBP15Q5T1M5 1219 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 ATPAF1Q5TC12 328 aaPredicted RBP2.04□□□□□ -2.08
KTN1-224ENST00000556631 KLC3Q6P597 504 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 ZNF438Q7Z4V0 828 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 SPATA21Q7Z572 469 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 MTDHQ86UE4 582 aaKnown RBP2.04□□□□□ -2.08
KTN1-224ENST00000556631 CDH24Q86UP0 819 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 NLRP14Q86W24 1093 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 CNGA4Q8IV77 575 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 IFNL3Q8IZI9 196 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 SLC43A3Q8NBI5 491 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 MTMR14Q8NCE2 650 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 SLAIN1Q8ND83 568 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 DNAAF4Q8WXU2 420 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 RAPGEF5Q92565 580 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 VPS39Q96JC1 886 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 SEC16BQ96JE7 1060 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 RAB3IPQ96QF0 476 aaPredicted RBP2.04□□□□□ -2.08
KTN1-224ENST00000556631 MPHOSPH8Q99549 860 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 DNAJC7Q99615 494 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 CITED2Q99967 270 aaPredicted RBP2.04□□□□□ -2.08
KTN1-224ENST00000556631 YIPF4Q9BSR8 244 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 ADAM33Q9BZ11 813 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 MIR1-1HGQ9H1L0 117 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 SYNDIG1Q9H7V2 258 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 CERS4Q9HA82 394 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 TUFT1Q9NNX1 390 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 IL1RAPL2Q9NP60 686 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 STARD7Q9NQZ5 370 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 FAM217BQ9NTX9 383 aaPredicted RBP2.04□□□□□ -2.08
KTN1-224ENST00000556631 HPF1Q9NWY4 346 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 HACD3Q9P035 362 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 KIAA1522Q9P206 1035 aaPredicted RBP2.04□□□□□ -2.08
KTN1-224ENST00000556631 ZRANB1Q9UGI0 708 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 SRP68Q9UHB9 627 aaKnown RBP2.04□□□□□ -2.08
KTN1-224ENST00000556631 CCNL1Q9UK58 526 aaPredicted RBP2.04□□□□□ -2.08
KTN1-224ENST00000556631 TPCN1Q9ULQ1 816 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 MYO6Q9UM54 1294 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 KLHL20Q9Y2M5 609 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 SLC12A7Q9Y666 1083 aa2.04□□□□□ -2.08
KTN1-224ENST00000556631 CTAGE15A4D2H0 777 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 VSTM5A8MXK1 200 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 GSTA4O15217 222 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 ATP2C2O75185 946 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 RNASEH2AO75792 299 aaKnown RBP2.03□□□□□ -2.08
KTN1-224ENST00000556631 MT-CO1P00395 513 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 CTAGE8P0CG41 777 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 NDUFV2P19404 249 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 RXRAP19793 462 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 MRPS25P82663 173 aaKnown RBP2.03□□□□□ -2.08
KTN1-224ENST00000556631 GALK2Q01415 458 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 EXOSC10Q01780 885 aaKnown RBP2.03□□□□□ -2.08
KTN1-224ENST00000556631 COL19A1Q14993 1142 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 SMAD1Q15797 465 aaKnown RBP2.03□□□□□ -2.08
KTN1-224ENST00000556631 PARP10Q53GL7 1025 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 DCAF17Q5H9S7 520 aaPredicted RBP2.03□□□□□ -2.08
KTN1-224ENST00000556631 FAM47CQ5HY64 1035 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 ZC3H12BQ5HYM0 836 aaKnown RBP2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms