RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 DDX11Q96FC9 970 aa19.95■□□□□ 0.78
PSEN1-217ENST00000556533 TMEM87BQ96K49 555 aa19.95■□□□□ 0.78
PSEN1-217ENST00000556533 TCEANC2Q96MN5 208 aa19.95■□□□□ 0.78
PSEN1-217ENST00000556533 RNF208Q9H0X6 261 aa19.95■□□□□ 0.78
PSEN1-217ENST00000556533 UNC93B1Q9H1C4 597 aa19.95■□□□□ 0.78
PSEN1-217ENST00000556533 RANBP17Q9H2T7 1088 aaKnown RBP19.95■□□□□ 0.78
PSEN1-217ENST00000556533 LY9Q9HBG7 655 aa19.95■□□□□ 0.78
PSEN1-217ENST00000556533 SLC5A4Q9NY91 659 aa19.95■□□□□ 0.78
PSEN1-217ENST00000556533 ZNF536O15090 1300 aa19.95■□□□□ 0.78
PSEN1-217ENST00000556533 POTEFA5A3E0 1075 aa19.94■□□□□ 0.78
PSEN1-217ENST00000556533 SH2B2O14492 632 aaPredicted RBP19.94■□□□□ 0.78
PSEN1-217ENST00000556533 ANKRD35Q8N283 1001 aa19.94■□□□□ 0.78
PSEN1-217ENST00000556533 STAG2Q8N3U4 1231 aa19.94■□□□□ 0.78
PSEN1-217ENST00000556533 CHST13Q8NET6 341 aa19.94■□□□□ 0.78
PSEN1-217ENST00000556533 JAKMIP1Q96N16 626 aaKnown RBP19.94■□□□□ 0.78
PSEN1-217ENST00000556533 TRERF1Q96PN7 1200 aa19.94■□□□□ 0.78
PSEN1-217ENST00000556533 MYL10Q9BUA6 226 aa19.94■□□□□ 0.78
PSEN1-217ENST00000556533 USP26Q9BXU7 913 aa19.94■□□□□ 0.78
PSEN1-217ENST00000556533 RNF146Q9NTX7 359 aa19.94■□□□□ 0.78
PSEN1-217ENST00000556533 FLRT1Q9NZU1 646 aa19.94■□□□□ 0.78
PSEN1-217ENST00000556533 FBXO40Q9UH90 709 aa19.94■□□□□ 0.78
PSEN1-217ENST00000556533 SNX14Q9Y5W7 946 aa19.94■□□□□ 0.78
PSEN1-217ENST00000556533 HTTP42858 3142 aa19.93■□□□□ 0.78
PSEN1-217ENST00000556533 A0A0G2JMZ2 1700 aa19.93■□□□□ 0.78
PSEN1-217ENST00000556533 KLRF2D3W0D1 207 aa19.93■□□□□ 0.78
PSEN1-217ENST00000556533 ICAM1P05362 532 aa19.93■□□□□ 0.78
PSEN1-217ENST00000556533 HOXC6P09630 235 aa19.93■□□□□ 0.78
PSEN1-217ENST00000556533 CPA1P15085 419 aa19.93■□□□□ 0.78
PSEN1-217ENST00000556533 MFSD14CQ5VZR4 134 aa19.93■□□□□ 0.78
PSEN1-217ENST00000556533 DHX32Q7L7V1 743 aaKnown RBP19.93■□□□□ 0.78
PSEN1-217ENST00000556533 ADGRF4Q8IZF3 695 aa19.93■□□□□ 0.78
PSEN1-217ENST00000556533 TMTC2Q8N394 836 aa19.93■□□□□ 0.78
PSEN1-217ENST00000556533 PRKAR2AP13861 404 aaKnown RBP19.92■□□□□ 0.78
PSEN1-217ENST00000556533 FGD1P98174 961 aa19.92■□□□□ 0.78
PSEN1-217ENST00000556533 GRM4Q14833 912 aa19.92■□□□□ 0.78
PSEN1-217ENST00000556533 TKFCQ3LXA3 575 aa19.92■□□□□ 0.78
PSEN1-217ENST00000556533 RAB11FIP4Q86YS3 637 aa19.92■□□□□ 0.78
PSEN1-217ENST00000556533 ZNF654Q8IZM8 581 aa19.92■□□□□ 0.78
PSEN1-217ENST00000556533 KCNB2Q92953 911 aa19.92■□□□□ 0.78
PSEN1-217ENST00000556533 MTA3Q9BTC8 594 aa19.92■□□□□ 0.78
PSEN1-217ENST00000556533 ACAD9Q9H845 621 aa19.92■□□□□ 0.78
PSEN1-217ENST00000556533 MAD2L2Q9UI95 211 aa19.92■□□□□ 0.78
PSEN1-217ENST00000556533 PALM3A6NDB9 673 aaPredicted RBP19.91■□□□□ 0.78
PSEN1-217ENST00000556533 HMGB1P09429 215 aaKnown RBP19.91■□□□□ 0.78
PSEN1-217ENST00000556533 EN2P19622 333 aaPredicted RBP19.91■□□□□ 0.78
PSEN1-217ENST00000556533 CYP2C19P33261 490 aa19.91■□□□□ 0.78
PSEN1-217ENST00000556533 EXOSC10Q01780 885 aaKnown RBP19.91■□□□□ 0.78
PSEN1-217ENST00000556533 CACNB2Q08289 660 aaPredicted RBP19.91■□□□□ 0.78
PSEN1-217ENST00000556533 TROAPQ12815 778 aa19.91■□□□□ 0.78
PSEN1-217ENST00000556533 MUM1L1Q5H9M0 696 aa19.91■□□□□ 0.78
PSEN1-217ENST00000556533 JMJD4Q9H9V9 463 aa19.91■□□□□ 0.78
PSEN1-217ENST00000556533 HMX1Q9NP08 348 aaPredicted RBP19.91■□□□□ 0.78
PSEN1-217ENST00000556533 LIFRP42702 1097 aa19.9■□□□□ 0.78
PSEN1-217ENST00000556533 CDC37Q16543 378 aaPredicted RBP19.9■□□□□ 0.78
PSEN1-217ENST00000556533 USH1GQ495M9 461 aa19.9■□□□□ 0.78
PSEN1-217ENST00000556533 NSMFQ6X4W1 530 aa19.9■□□□□ 0.78
PSEN1-217ENST00000556533 SYNE3Q6ZMZ3 975 aa19.9■□□□□ 0.78
PSEN1-217ENST00000556533 CCDC144CPQ8IYA2 1237 aa19.9■□□□□ 0.78
PSEN1-217ENST00000556533 CTCFLQ8NI51 663 aaPredicted RBP19.9■□□□□ 0.78
PSEN1-217ENST00000556533 MAML3Q96JK9 1138 aa19.9■□□□□ 0.78
PSEN1-217ENST00000556533 DEFB118Q96PH6 123 aa19.9■□□□□ 0.78
PSEN1-217ENST00000556533 NAP1L2Q9ULW6 460 aaPredicted RBP19.9■□□□□ 0.78
PSEN1-217ENST00000556533 SLC12A7Q9Y666 1083 aa19.9■□□□□ 0.78
PSEN1-217ENST00000556533 DDAH1O94760 285 aa19.89■□□□□ 0.77
PSEN1-217ENST00000556533 RXRAP19793 462 aa19.89■□□□□ 0.77
PSEN1-217ENST00000556533 ZNF792Q3KQV3 632 aa19.89■□□□□ 0.77
PSEN1-217ENST00000556533 PARP14Q460N5 1801 aa19.89■□□□□ 0.77
PSEN1-217ENST00000556533 BLOC1S2Q6QNY1 142 aa19.89■□□□□ 0.77
PSEN1-217ENST00000556533 RPTORQ8N122 1335 aa19.89■□□□□ 0.77
PSEN1-217ENST00000556533 PIBF1Q8WXW3 757 aa19.89■□□□□ 0.77
PSEN1-217ENST00000556533 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.89■□□□□ 0.771e-9■■■■■ 54.1
PSEN1-217ENST00000556533 COL11A1P12107 1806 aaPredicted RBP19.88■□□□□ 0.77
PSEN1-217ENST00000556533 WDR19Q8NEZ3 1342 aa19.88■□□□□ 0.77
PSEN1-217ENST00000556533 EPB41L2O43491 1005 aaKnown RBP19.88■□□□□ 0.77
PSEN1-217ENST00000556533 TFRCP02786 760 aaKnown RBP19.88■□□□□ 0.77
PSEN1-217ENST00000556533 CASTP20810 708 aaKnown RBP19.88■□□□□ 0.77
PSEN1-217ENST00000556533 PSMA5P28066 241 aa19.88■□□□□ 0.77
PSEN1-217ENST00000556533 CNGA1P29973 690 aa19.88■□□□□ 0.77
PSEN1-217ENST00000556533 KIF5BP33176 963 aa19.88■□□□□ 0.77
PSEN1-217ENST00000556533 QRICH1Q2TAL8 776 aa19.88■□□□□ 0.77
PSEN1-217ENST00000556533 OLFML2BQ68BL8 750 aa19.88■□□□□ 0.77
PSEN1-217ENST00000556533 HOMER1Q86YM7 354 aa19.88■□□□□ 0.77
PSEN1-217ENST00000556533 A1CFQ9NQ94 594 aaKnown RBP19.88■□□□□ 0.77
PSEN1-217ENST00000556533 PNMA2Q9UL42 364 aa19.88■□□□□ 0.77
PSEN1-217ENST00000556533 DOCK3Q8IZD9 2030 aa19.87■□□□□ 0.77
PSEN1-217ENST00000556533 POTEB2H3BUK9 544 aa19.87■□□□□ 0.77
PSEN1-217ENST00000556533 GJB1P08034 283 aa19.87■□□□□ 0.77
PSEN1-217ENST00000556533 CALM1P0DP23 149 aa19.87■□□□□ 0.77
PSEN1-217ENST00000556533 CALM2P0DP24 149 aa19.87■□□□□ 0.77
PSEN1-217ENST00000556533 CALM3P0DP25 149 aa19.87■□□□□ 0.77
PSEN1-217ENST00000556533 CCND3P30281 292 aaPredicted RBP19.87■□□□□ 0.77
PSEN1-217ENST00000556533 CNTN2Q02246 1040 aa19.87■□□□□ 0.77
PSEN1-217ENST00000556533 PRAMEF19Q5SWL8 479 aa19.87■□□□□ 0.77
PSEN1-217ENST00000556533 MAP3K21Q5TCX8 1036 aa19.87■□□□□ 0.77
PSEN1-217ENST00000556533 Q6ZUG5 572 aa19.87■□□□□ 0.77
PSEN1-217ENST00000556533 FBXO11Q86XK2 927 aa19.87■□□□□ 0.77
PSEN1-217ENST00000556533 DIS3Q9Y2L1 958 aaKnown RBP19.87■□□□□ 0.77
PSEN1-217ENST00000556533 PLXNB2O15031 1838 aa19.87■□□□□ 0.77
PSEN1-217ENST00000556533 DNAJC25-GNG10A0A024R161 153 aa19.86■□□□□ 0.77
PSEN1-217ENST00000556533 PTPDC1A2A3K4 754 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms