RNA–Protein interactions for RNA: ENST00000556527.1

CRX-203, Transcript of cone-rod homeobox, humanhuman

TSL 1 (best)

Gene CRX, Length 164 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-203ENST00000556527 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.66□□□□□ -0.54
CRX-203ENST00000556527 MTIF3Q9H2K0 278 aaKnown RBP11.66□□□□□ -0.54
CRX-203ENST00000556527 SLC38A10Q9HBR0 1119 aa11.66□□□□□ -0.54
CRX-203ENST00000556527 SYNPO2Q9UMS6 1093 aa11.66□□□□□ -0.54
CRX-203ENST00000556527 DNAJC25-GNG10A0A024R161 153 aa11.65□□□□□ -0.54
CRX-203ENST00000556527 TMEM232C9JQI7 657 aa11.65□□□□□ -0.54
CRX-203ENST00000556527 BMP3P12645 472 aa11.65□□□□□ -0.54
CRX-203ENST00000556527 CST5P28325 142 aaPredicted RBP11.65□□□□□ -0.54
CRX-203ENST00000556527 SLFN13Q68D06 897 aa11.65□□□□□ -0.54
CRX-203ENST00000556527 PSRC1Q6PGN9 363 aaPredicted RBP11.65□□□□□ -0.54
CRX-203ENST00000556527 ARMCX2Q7L311 632 aa11.65□□□□□ -0.54
CRX-203ENST00000556527 GMCL1P1Q8NEA9 526 aa11.65□□□□□ -0.54
CRX-203ENST00000556527 KLHDC9Q8NEP7 349 aa11.65□□□□□ -0.54
CRX-203ENST00000556527 CHURC1Q8WUH1 139 aa11.65□□□□□ -0.54
CRX-203ENST00000556527 OSBP2Q969R2 916 aa11.65□□□□□ -0.54
CRX-203ENST00000556527 PPP1R12CQ9BZL4 782 aa11.65□□□□□ -0.54
CRX-203ENST00000556527 ZNF576Q9H609 170 aa11.65□□□□□ -0.54
CRX-203ENST00000556527 ACAD9Q9H845 621 aa11.65□□□□□ -0.54
CRX-203ENST00000556527 MTMR4Q9NYA4 1195 aa11.65□□□□□ -0.54
CRX-203ENST00000556527 COL11A1P12107 1806 aaPredicted RBP11.65□□□□□ -0.55
CRX-203ENST00000556527 PLXNA1Q9UIW2 1896 aa11.64□□□□□ -0.55
CRX-203ENST00000556527 ARVCFO00192 962 aa11.64□□□□□ -0.55
CRX-203ENST00000556527 ERC2O15083 957 aa11.64□□□□□ -0.55
CRX-203ENST00000556527 ZEB2O60315 1214 aa11.64□□□□□ -0.55
CRX-203ENST00000556527 SLC1A4P43007 532 aa11.64□□□□□ -0.55
CRX-203ENST00000556527 GJA9P57773 515 aa11.64□□□□□ -0.55
CRX-203ENST00000556527 TNFAIP2Q03169 654 aa11.64□□□□□ -0.55
CRX-203ENST00000556527 GRIN2CQ14957 1233 aa11.64□□□□□ -0.55
CRX-203ENST00000556527 FAM160B2Q86V87 743 aa11.64□□□□□ -0.55
CRX-203ENST00000556527 CCDC144CPQ8IYA2 1237 aa11.64□□□□□ -0.55
CRX-203ENST00000556527 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.64□□□□□ -0.55
CRX-203ENST00000556527 AP5M1Q9H0R1 490 aa11.64□□□□□ -0.55
CRX-203ENST00000556527 NAPBQ9H115 298 aa11.64□□□□□ -0.55
CRX-203ENST00000556527 ZBTB47Q9UFB7 747 aaPredicted RBP11.64□□□□□ -0.55
CRX-203ENST00000556527 MSRAQ9UJ68 235 aa11.64□□□□□ -0.55
CRX-203ENST00000556527 TBX21Q9UL17 535 aa11.64□□□□□ -0.55
CRX-203ENST00000556527 PARP14Q460N5 1801 aa11.64□□□□□ -0.55
CRX-203ENST00000556527 MYADML2A6NDP7 307 aa11.63□□□□□ -0.55
CRX-203ENST00000556527 ASB14A6NK59 587 aa11.63□□□□□ -0.55
CRX-203ENST00000556527 PATL2C9JE40 543 aaKnown RBP11.63□□□□□ -0.55
CRX-203ENST00000556527 CABYRO75952 493 aa11.63□□□□□ -0.55
CRX-203ENST00000556527 CSF2RAP15509 400 aa11.63□□□□□ -0.55
CRX-203ENST00000556527 TFAP4Q01664 338 aa11.63□□□□□ -0.55
CRX-203ENST00000556527 TSHZ3Q63HK5 1081 aa11.63□□□□□ -0.55
CRX-203ENST00000556527 CCSAPQ6IQ19 270 aaPredicted RBP11.63□□□□□ -0.55
CRX-203ENST00000556527 IFNL3Q8IZI9 196 aa11.63□□□□□ -0.55
CRX-203ENST00000556527 IL27Q8NEV9 243 aa11.63□□□□□ -0.55
CRX-203ENST00000556527 PPM1EQ8WY54 764 aa11.63□□□□□ -0.55
CRX-203ENST00000556527 MKL1Q969V6 931 aa11.63□□□□□ -0.55
CRX-203ENST00000556527 CHMP4CQ96CF2 233 aa11.63□□□□□ -0.55
CRX-203ENST00000556527 FSD1Q9BTV5 496 aa11.63□□□□□ -0.55
CRX-203ENST00000556527 UPF3AQ9H1J1 476 aaKnown RBP11.63□□□□□ -0.55
CRX-203ENST00000556527 RNF146Q9NTX7 359 aa11.63□□□□□ -0.55
CRX-203ENST00000556527 STX8Q9UNK0 236 aa11.63□□□□□ -0.55
CRX-203ENST00000556527 MYH7P12883 1935 aa11.62□□□□□ -0.55
CRX-203ENST00000556527 ZNFX1Q9P2E3 1918 aaKnown RBP11.62□□□□□ -0.55
CRX-203ENST00000556527 IGKV6D-41A0A0C4DH26 115 aa11.62□□□□□ -0.55
CRX-203ENST00000556527 TSPY2A6NKD2 308 aa11.62□□□□□ -0.55
CRX-203ENST00000556527 M0R2C6 588 aa11.62□□□□□ -0.55
CRX-203ENST00000556527 ALAS1P13196 640 aa11.62□□□□□ -0.55
CRX-203ENST00000556527 CDK7P50613 346 aa11.62□□□□□ -0.55
CRX-203ENST00000556527 BEX3Q00994 111 aa11.62□□□□□ -0.55
CRX-203ENST00000556527 CNTN2Q02246 1040 aa11.62□□□□□ -0.55
CRX-203ENST00000556527 RAB30Q15771 203 aa11.62□□□□□ -0.55
CRX-203ENST00000556527 TKFCQ3LXA3 575 aa11.62□□□□□ -0.55
CRX-203ENST00000556527 TJAP1Q5JTD0 557 aa11.62□□□□□ -0.55
CRX-203ENST00000556527 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.62□□□□□ -0.55
CRX-203ENST00000556527 TLK2Q86UE8 772 aa11.62□□□□□ -0.55
CRX-203ENST00000556527 NEDD1Q8NHV4 660 aa11.62□□□□□ -0.55
CRX-203ENST00000556527 TRERF1Q96PN7 1200 aa11.62□□□□□ -0.55
CRX-203ENST00000556527 HIPK3Q9H422 1215 aa11.62□□□□□ -0.55
CRX-203ENST00000556527 EPB41L4AQ9HCS5 686 aaPredicted RBP11.62□□□□□ -0.55
CRX-203ENST00000556527 ACRP10323 421 aa11.61□□□□□ -0.55
CRX-203ENST00000556527 MCCP23508 829 aa11.61□□□□□ -0.55
CRX-203ENST00000556527 PPARAQ07869 468 aa11.61□□□□□ -0.55
CRX-203ENST00000556527 FSCN1Q16658 493 aaKnown RBP11.61□□□□□ -0.55
CRX-203ENST00000556527 TMEM240Q5SV17 173 aa11.61□□□□□ -0.55
CRX-203ENST00000556527 CXCL17Q6UXB2 119 aa11.61□□□□□ -0.55
CRX-203ENST00000556527 ZNF365Q70YC5 407 aa11.61□□□□□ -0.55
CRX-203ENST00000556527 FAM126BQ8IXS8 530 aa11.61□□□□□ -0.55
CRX-203ENST00000556527 STAG1Q8WVM7 1258 aa11.61□□□□□ -0.55
CRX-203ENST00000556527 GMCL1Q96IK5 515 aa11.61□□□□□ -0.55
CRX-203ENST00000556527 AGBL1Q96MI9 1066 aa11.61□□□□□ -0.55
CRX-203ENST00000556527 SEZ6LQ9BYH1 1024 aa11.61□□□□□ -0.55
CRX-203ENST00000556527 PBX4Q9BYU1 374 aa11.61□□□□□ -0.55
CRX-203ENST00000556527 SLC28A3Q9HAS3 691 aa11.61□□□□□ -0.55
CRX-203ENST00000556527 A1CFQ9NQ94 594 aaKnown RBP11.61□□□□□ -0.55
CRX-203ENST00000556527 MTMR7Q9Y216 660 aa11.61□□□□□ -0.55
CRX-203ENST00000556527 TTC41PQ6P2S7 1318 aa11.6□□□□□ -0.55
CRX-203ENST00000556527 SMCHD1A6NHR9 2005 aa11.6□□□□□ -0.55
CRX-203ENST00000556527 DYNC1LI2O43237 492 aaPredicted RBP11.6□□□□□ -0.55
CRX-203ENST00000556527 ADCY6O43306 1168 aa11.6□□□□□ -0.55
CRX-203ENST00000556527 FGBP02675 491 aa11.6□□□□□ -0.55
CRX-203ENST00000556527 IGFBP4P22692 258 aa11.6□□□□□ -0.55
CRX-203ENST00000556527 CYP2C18P33260 490 aa11.6□□□□□ -0.55
CRX-203ENST00000556527 IRX5P78411 483 aaPredicted RBP11.6□□□□□ -0.55
CRX-203ENST00000556527 CCDC96Q2M329 555 aa11.6□□□□□ -0.55
CRX-203ENST00000556527 C20orf194Q5TEA3 1177 aa11.6□□□□□ -0.55
CRX-203ENST00000556527 NSMFQ6X4W1 530 aa11.6□□□□□ -0.55
CRX-203ENST00000556527 EEPD1Q7L9B9 569 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms