RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 ATP8A2Q9NTI2 1148 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 ANKIB1Q9P2G1 1089 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 ZNF219Q9P2Y4 722 aaPredicted RBP5.73□□□□□ -1.49
TMEM260-210ENST00000556422 LEMD3Q9Y2U8 911 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 POLRMTO00411 1230 aaKnown RBP5.73□□□□□ -1.49
TMEM260-210ENST00000556422 ZNF202O95125 648 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 TPM1P09493 284 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 USP17L8P0C7I0 530 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 FOSL1P15407 271 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 VASPP50552 380 aaPredicted RBP5.73□□□□□ -1.49
TMEM260-210ENST00000556422 IGBP1P78318 339 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 GRIN1Q05586 938 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 STX1AQ16623 288 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 DPCR1Q3MIW9 517 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 MAP9Q49MG5 647 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 EARS2Q5JPH6 523 aaKnown RBP5.73□□□□□ -1.49
TMEM260-210ENST00000556422 ZC3H15Q8WU90 426 aaKnown RBP5.73□□□□□ -1.49
TMEM260-210ENST00000556422 DUSP9Q99956 384 aaKnown RBP5.73□□□□□ -1.49
TMEM260-210ENST00000556422 RNF26Q9BY78 433 aaPredicted RBP5.73□□□□□ -1.49
TMEM260-210ENST00000556422 TRIM6Q9C030 488 aaPredicted RBP5.73□□□□□ -1.49
TMEM260-210ENST00000556422 KIAA1468Q9P260 1216 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 IP6K2Q9UHH9 426 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 FAN1Q9Y2M0 1017 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 CNTNAP5Q8WYK1 1306 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 hCG_1642624A0A1W2PR95 340 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 KLRG2A4D1S0 409 aaPredicted RBP5.73□□□□□ -1.49
TMEM260-210ENST00000556422 FAM205CA6NFA0 338 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 WNT7AO00755 349 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 MYO1BO43795 1136 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 TRIM37O94972 964 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 SERPINB2P05120 415 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 RWDD2BP57060 319 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 SLC4A8Q2Y0W8 1093 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 FAM47AQ5JRC9 791 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 IFIT1BQ5T764 474 aaKnown RBP5.73□□□□□ -1.49
TMEM260-210ENST00000556422 RESP18Q5W5W9 173 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 MCTP2Q6DN12 878 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 TBC1D22AQ8WUA7 517 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 RPS6KC1Q96S38 1066 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 CRNKL1Q9BZJ0 848 aaKnown RBP5.73□□□□□ -1.49
TMEM260-210ENST00000556422 DNAI2Q9GZS0 605 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 FOXP1Q9H334 677 aaPredicted RBP5.73□□□□□ -1.49
TMEM260-210ENST00000556422 ARPP21Q9UBL0 812 aaPredicted RBP5.73□□□□□ -1.49
TMEM260-210ENST00000556422 HDAC9Q9UKV0 1011 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 MRFAP1Q9Y605 127 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 TNS1Q9HBL0 1735 aaKnown RBP5.72□□□□□ -1.49
TMEM260-210ENST00000556422 CFAP69A5D8W1 941 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 CAVIN2O95810 425 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 VEGFAP15692 232 aaPredicted RBP5.72□□□□□ -1.49
TMEM260-210ENST00000556422 SLC27A3Q5K4L6 730 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 C17orf53Q8N3J3 647 aaPredicted RBP5.72□□□□□ -1.49
TMEM260-210ENST00000556422 SH3RF3Q8TEJ3 882 aaPredicted RBP5.72□□□□□ -1.49
TMEM260-210ENST00000556422 RTFDC1Q9BY42 306 aaPredicted RBP5.72□□□□□ -1.49
TMEM260-210ENST00000556422 IL17RBQ9NRM6 502 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 SPATS2LQ9NUQ6 558 aaKnown RBP5.72□□□□□ -1.49
TMEM260-210ENST00000556422 SNED1Q8TER0 1413 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 ADAMTS3O15072 1205 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 NPHP1O15259 732 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 HOXA2O43364 376 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 ZNF75DP51815 510 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 CDR1P51861 262 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 HDLBPQ00341 1268 aaKnown RBP5.72□□□□□ -1.49
TMEM260-210ENST00000556422 C12orf60Q5U649 245 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 SARM1Q6SZW1 724 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 TMTC3Q6ZXV5 915 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 SAPCD2Q86UD0 394 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 CCDC65Q8IXS2 484 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 TRIM22Q8IYM9 498 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 PIBF1Q8WXW3 757 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 WASF1Q92558 559 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 TNFRSF25Q93038 417 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 FEZ1Q99689 392 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 SH3GL3Q99963 347 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 PHF20Q9BVI0 1012 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 CD209Q9NNX6 404 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 TRMT1Q9NXH9 659 aaKnown RBP5.72□□□□□ -1.49
TMEM260-210ENST00000556422 POLLQ9UGP5 575 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 PCDHB6Q9Y5E3 794 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 SCN9AQ15858 1988 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 DCAF8L1A6NGE4 600 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 TRIM64CA6NLI5 447 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 HIP1RO75146 1068 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 KRT38O76015 456 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 IL1R1P14778 569 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 HOXA10P31260 410 aaPredicted RBP5.72□□□□□ -1.49
TMEM260-210ENST00000556422 RAD51AP2Q09MP3 1159 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 GPS2Q13227 327 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 RASA3Q14644 834 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 PPP2R5BQ15173 497 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 TSR1Q2NL82 804 aaKnown RBP5.72□□□□□ -1.49
TMEM260-210ENST00000556422 IQCA1Q86XH1 822 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 TRIM42Q8IWZ5 723 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 SRBD1Q8N5C6 995 aaKnown RBP5.72□□□□□ -1.49
TMEM260-210ENST00000556422 WDR66Q8TBY9 1149 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 NAP1L4Q99733 375 aaKnown RBP5.72□□□□□ -1.49
TMEM260-210ENST00000556422 SEZ6LQ9BYH1 1024 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 INO80BQ9C086 356 aaPredicted RBP5.72□□□□□ -1.49
TMEM260-210ENST00000556422 NACA2Q9H009 215 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 HSD3B7Q9H2F3 369 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 TMEM165Q9HC07 324 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms