RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 IGDCC4Q8TDY8 1250 aa11.34□□□□□ -0.59
SRP54-210ENST00000556380 DCAF4Q8WV16 495 aa11.34□□□□□ -0.59
SRP54-210ENST00000556380 USP6NLQ92738 828 aa11.34□□□□□ -0.59
SRP54-210ENST00000556380 MOV10L1Q9BXT6 1211 aaKnown RBP11.34□□□□□ -0.59
SRP54-210ENST00000556380 SPATC1LQ9H0A9 340 aa11.34□□□□□ -0.59
SRP54-210ENST00000556380 FEM1BQ9UK73 627 aa11.34□□□□□ -0.59
SRP54-210ENST00000556380 ZNF214Q9UL59 606 aaPredicted RBP11.34□□□□□ -0.59
SRP54-210ENST00000556380 PTCH2Q9Y6C5 1203 aa11.34□□□□□ -0.59
SRP54-210ENST00000556380 TNKSO95271 1327 aa11.34□□□□□ -0.59
SRP54-210ENST00000556380 DOCK3Q8IZD9 2030 aa11.33□□□□□ -0.6
SRP54-210ENST00000556380 ZSWIM8A7E2V4 1837 aa11.33□□□□□ -0.6
SRP54-210ENST00000556380 TMEM232C9JQI7 657 aa11.33□□□□□ -0.6
SRP54-210ENST00000556380 TNPO2O14787 897 aaKnown RBP11.33□□□□□ -0.6
SRP54-210ENST00000556380 ATP2A1O14983 1001 aa11.33□□□□□ -0.6
SRP54-210ENST00000556380 EPB41L2O43491 1005 aaKnown RBP11.33□□□□□ -0.6
SRP54-210ENST00000556380 HRO43593 1189 aa11.33□□□□□ -0.6
SRP54-210ENST00000556380 PDHBP11177 359 aa11.33□□□□□ -0.6
SRP54-210ENST00000556380 MAPK4P31152 587 aa11.33□□□□□ -0.6
SRP54-210ENST00000556380 FOSBP53539 338 aa11.33□□□□□ -0.6
SRP54-210ENST00000556380 IRF5Q13568 498 aa11.33□□□□□ -0.6
SRP54-210ENST00000556380 MORN1Q5T089 497 aa11.33□□□□□ -0.6
SRP54-210ENST00000556380 TTBK2Q6IQ55 1244 aa11.33□□□□□ -0.6
SRP54-210ENST00000556380 KCTD1Q719H9 257 aa11.33□□□□□ -0.6
SRP54-210ENST00000556380 SHCBP1Q8NEM2 672 aa11.33□□□□□ -0.6
SRP54-210ENST00000556380 CHMP4CQ96CF2 233 aa11.33□□□□□ -0.6
SRP54-210ENST00000556380 SLC38A10Q9HBR0 1119 aa11.33□□□□□ -0.6
SRP54-210ENST00000556380 SENP2Q9HC62 589 aa11.33□□□□□ -0.6
SRP54-210ENST00000556380 MYH4Q9Y623 1939 aa11.33□□□□□ -0.6
SRP54-210ENST00000556380 CENPFP49454 3210 aa11.32□□□□□ -0.6
SRP54-210ENST00000556380 HSPA4P34932 840 aa11.32□□□□□ -0.6
SRP54-210ENST00000556380 STAT3P40763 770 aa11.32□□□□□ -0.6
SRP54-210ENST00000556380 FLT3LGP49771 235 aa11.32□□□□□ -0.6
SRP54-210ENST00000556380 CCNA1P78396 465 aa11.32□□□□□ -0.6
SRP54-210ENST00000556380 EXOSC10Q01780 885 aaKnown RBP11.32□□□□□ -0.6
SRP54-210ENST00000556380 ZNF543Q08ER8 600 aa11.32□□□□□ -0.6
SRP54-210ENST00000556380 CHST3Q7LGC8 479 aa11.32□□□□□ -0.6
SRP54-210ENST00000556380 GPR142Q7Z601 462 aa11.32□□□□□ -0.6
SRP54-210ENST00000556380 PLEKHH3Q7Z736 793 aa11.32□□□□□ -0.6
SRP54-210ENST00000556380 RALYLQ86SE5 291 aaKnown RBP11.32□□□□□ -0.6
SRP54-210ENST00000556380 FAM160B2Q86V87 743 aa11.32□□□□□ -0.6
SRP54-210ENST00000556380 PNMA1Q8ND90 353 aa11.32□□□□□ -0.6
SRP54-210ENST00000556380 CHURC1Q8WUH1 139 aa11.32□□□□□ -0.6
SRP54-210ENST00000556380 KIFC2Q96AC6 838 aa11.32□□□□□ -0.6
SRP54-210ENST00000556380 COA7Q96BR5 231 aa11.32□□□□□ -0.6
SRP54-210ENST00000556380 ARMC5Q96C12 935 aa11.32□□□□□ -0.6
SRP54-210ENST00000556380 UBAC1Q9BSL1 405 aa11.32□□□□□ -0.6
SRP54-210ENST00000556380 MTA3Q9BTC8 594 aa11.32□□□□□ -0.6
SRP54-210ENST00000556380 USP26Q9BXU7 913 aa11.32□□□□□ -0.6
SRP54-210ENST00000556380 PRR12Q9ULL5 1215 aa11.32□□□□□ -0.6
SRP54-210ENST00000556380 PARP14Q460N5 1801 aa11.31□□□□□ -0.6
SRP54-210ENST00000556380 IFIT3O14879 490 aaKnown RBP11.31□□□□□ -0.6
SRP54-210ENST00000556380 REC8O95072 547 aa11.31□□□□□ -0.6
SRP54-210ENST00000556380 FDX1P10109 184 aa11.31□□□□□ -0.6
SRP54-210ENST00000556380 ERCC3P19447 782 aa11.31□□□□□ -0.6
SRP54-210ENST00000556380 PTPREP23469 700 aa11.31□□□□□ -0.6
SRP54-210ENST00000556380 STAT2P52630 851 aa11.31□□□□□ -0.6
SRP54-210ENST00000556380 ADCK5Q3MIX3 580 aa11.31□□□□□ -0.6
SRP54-210ENST00000556380 RNF20Q5VTR2 975 aa11.31□□□□□ -0.6
SRP54-210ENST00000556380 RIOX2Q8IUF8 465 aa11.31□□□□□ -0.6
SRP54-210ENST00000556380 MROH8Q9H579 483 aa11.31□□□□□ -0.6
SRP54-210ENST00000556380 KAT14Q9H8E8 782 aa11.31□□□□□ -0.6
SRP54-210ENST00000556380 MTMR7Q9Y216 660 aa11.31□□□□□ -0.6
SRP54-210ENST00000556380 RIPK3Q9Y572 518 aa11.31□□□□□ -0.6
SRP54-210ENST00000556380 A0A0G2JMZ2 1700 aa11.31□□□□□ -0.6
SRP54-210ENST00000556380 ZNF536O15090 1300 aa11.31□□□□□ -0.6
SRP54-210ENST00000556380 KIAA0100Q14667 2235 aaKnown RBP11.3□□□□□ -0.6
SRP54-210ENST00000556380 SLC15A5A6NIM6 579 aa11.3□□□□□ -0.6
SRP54-210ENST00000556380 PRC1O43663 620 aa11.3□□□□□ -0.6
SRP54-210ENST00000556380 ZBED4O75132 1171 aa11.3□□□□□ -0.6
SRP54-210ENST00000556380 SLC25A27O95847 323 aa11.3□□□□□ -0.6
SRP54-210ENST00000556380 IGHA2P01877 340 aa11.3□□□□□ -0.6
SRP54-210ENST00000556380 HOXC6P09630 235 aa11.3□□□□□ -0.6
SRP54-210ENST00000556380 XRCC5P13010 732 aaKnown RBP11.3□□□□□ -0.6
SRP54-210ENST00000556380 MCM5P33992 734 aa11.3□□□□□ -0.6
SRP54-210ENST00000556380 SLC16A2P36021 539 aa11.3□□□□□ -0.6
SRP54-210ENST00000556380 OAZ1P54368 228 aa11.3□□□□□ -0.6
SRP54-210ENST00000556380 TROAPQ12815 778 aa11.3□□□□□ -0.6
SRP54-210ENST00000556380 GRB14Q14449 540 aa11.3□□□□□ -0.6
SRP54-210ENST00000556380 CCDC96Q2M329 555 aa11.3□□□□□ -0.6
SRP54-210ENST00000556380 IFIT1BQ5T764 474 aaKnown RBP11.3□□□□□ -0.6
SRP54-210ENST00000556380 SYDE2Q5VT97 1194 aa11.3□□□□□ -0.6
SRP54-210ENST00000556380 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.3□□□□□ -0.6
SRP54-210ENST00000556380 RAET1EQ8TD07 263 aa11.3□□□□□ -0.6
SRP54-210ENST00000556380 PXYLP1Q8TE99 480 aa11.3□□□□□ -0.6
SRP54-210ENST00000556380 NEK1Q96PY6 1258 aa11.3□□□□□ -0.6
SRP54-210ENST00000556380 TEX13BQ9BXU2 312 aa11.3□□□□□ -0.6
SRP54-210ENST00000556380 RANBP17Q9H2T7 1088 aaKnown RBP11.3□□□□□ -0.6
SRP54-210ENST00000556380 LY9Q9HBG7 655 aa11.3□□□□□ -0.6
SRP54-210ENST00000556380 GPCPD1Q9NPB8 672 aa11.3□□□□□ -0.6
SRP54-210ENST00000556380 SNX14Q9Y5W7 946 aa11.3□□□□□ -0.6
SRP54-210ENST00000556380 FRMPD2Q68DX3 1309 aaPredicted RBP11.3□□□□□ -0.6
SRP54-210ENST00000556380 PALM3A6NDB9 673 aaPredicted RBP11.29□□□□□ -0.6
SRP54-210ENST00000556380 SH2B2O14492 632 aaPredicted RBP11.29□□□□□ -0.6
SRP54-210ENST00000556380 STRNO43815 780 aa11.29□□□□□ -0.6
SRP54-210ENST00000556380 ADCY3O60266 1144 aa11.29□□□□□ -0.6
SRP54-210ENST00000556380 GOLGA8HP0CJ92 632 aa11.29□□□□□ -0.6
SRP54-210ENST00000556380 GRK4P32298 578 aa11.29□□□□□ -0.6
SRP54-210ENST00000556380 KRT32Q14532 448 aa11.29□□□□□ -0.6
SRP54-210ENST00000556380 PLS1Q14651 629 aa11.29□□□□□ -0.6
SRP54-210ENST00000556380 SLC35G1Q2M3R5 365 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms