RNA–Protein interactions for RNA: ENST00000556284.1

MTHFD1-213, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-213ENST00000556284 DEFB115Q30KQ5 88 aa11.66□□□□□ -0.54
MTHFD1-213ENST00000556284 GADL1Q6ZQY3 521 aa11.66□□□□□ -0.54
MTHFD1-213ENST00000556284 CATSPERGQ6ZRH7 1159 aa11.66□□□□□ -0.54
MTHFD1-213ENST00000556284 KCTD1Q719H9 257 aa11.66□□□□□ -0.54
MTHFD1-213ENST00000556284 CCDC83Q8IWF9 413 aa11.66□□□□□ -0.54
MTHFD1-213ENST00000556284 SRBD1Q8N5C6 995 aaKnown RBP11.66□□□□□ -0.54
MTHFD1-213ENST00000556284 NUP88Q99567 741 aaPredicted RBP11.66□□□□□ -0.54
MTHFD1-213ENST00000556284 SPZ1Q9BXG8 430 aa11.66□□□□□ -0.54
MTHFD1-213ENST00000556284 RPAP3Q9H6T3 665 aaPredicted RBP11.66□□□□□ -0.54
MTHFD1-213ENST00000556284 RIOX1Q9H6W3 641 aa11.66□□□□□ -0.54
MTHFD1-213ENST00000556284 ISY1Q9ULR0 285 aaKnown RBP11.66□□□□□ -0.54
MTHFD1-213ENST00000556284 AGTPBP1Q9UPW5 1226 aa11.66□□□□□ -0.54
MTHFD1-213ENST00000556284 CCL15-CCL14A0A0B4J2E2 113 aa11.65□□□□□ -0.54
MTHFD1-213ENST00000556284 PLEKHA8P1O95397 391 aa11.65□□□□□ -0.54
MTHFD1-213ENST00000556284 MLLT3P42568 568 aaPredicted RBP11.65□□□□□ -0.54
MTHFD1-213ENST00000556284 STAT2P52630 851 aa11.65□□□□□ -0.54
MTHFD1-213ENST00000556284 HMGN5P82970 282 aaKnown RBP11.65□□□□□ -0.54
MTHFD1-213ENST00000556284 SSRP1Q08945 709 aaKnown RBP11.65□□□□□ -0.54
MTHFD1-213ENST00000556284 FUT2Q10981 343 aa11.65□□□□□ -0.54
MTHFD1-213ENST00000556284 ST3GAL1Q11201 340 aa11.65□□□□□ -0.54
MTHFD1-213ENST00000556284 IKQ13123 557 aaPredicted RBP11.65□□□□□ -0.54
MTHFD1-213ENST00000556284 COG2Q14746 738 aa11.65□□□□□ -0.54
MTHFD1-213ENST00000556284 CCL15Q16663 113 aa11.65□□□□□ -0.54
MTHFD1-213ENST00000556284 TTBK2Q6IQ55 1244 aa11.65□□□□□ -0.54
MTHFD1-213ENST00000556284 RASGRP2Q7LDG7 609 aa11.65□□□□□ -0.54
MTHFD1-213ENST00000556284 PRPF38AQ8NAV1 312 aaKnown RBP11.65□□□□□ -0.54
MTHFD1-213ENST00000556284 NSUN7Q8NE18 718 aaKnown RBP11.65□□□□□ -0.54
MTHFD1-213ENST00000556284 TANGO6Q9C0B7 1094 aa11.65□□□□□ -0.54
MTHFD1-213ENST00000556284 UBA5Q9GZZ9 404 aa11.65□□□□□ -0.54
MTHFD1-213ENST00000556284 RBM27Q9P2N5 1060 aaKnown RBP11.65□□□□□ -0.54
MTHFD1-213ENST00000556284 DAXXQ9UER7 740 aaPredicted RBP11.65□□□□□ -0.54
MTHFD1-213ENST00000556284 SLC45A1Q9Y2W3 748 aa11.65□□□□□ -0.54
MTHFD1-213ENST00000556284 PHIPQ8WWQ0 1821 aa11.65□□□□□ -0.55
MTHFD1-213ENST00000556284 MYH4Q9Y623 1939 aa11.64□□□□□ -0.55
MTHFD1-213ENST00000556284 MYPNQ86TC9 1320 aa11.64□□□□□ -0.55
MTHFD1-213ENST00000556284 FAM155AB1AL88 458 aaPredicted RBP11.64□□□□□ -0.55
MTHFD1-213ENST00000556284 PRPF3O43395 683 aaKnown RBP11.64□□□□□ -0.55
MTHFD1-213ENST00000556284 CTDNEP1O95476 244 aa11.64□□□□□ -0.55
MTHFD1-213ENST00000556284 HSP90AA1P07900 732 aaKnown RBP11.64□□□□□ -0.55
MTHFD1-213ENST00000556284 FDX1P10109 184 aa11.64□□□□□ -0.55
MTHFD1-213ENST00000556284 AKAP17AQ02040 695 aaKnown RBP11.64□□□□□ -0.55
MTHFD1-213ENST00000556284 DGKZQ13574 1117 aa11.64□□□□□ -0.55
MTHFD1-213ENST00000556284 SYDE2Q5VT97 1194 aa11.64□□□□□ -0.55
MTHFD1-213ENST00000556284 GPAT2Q6NUI2 795 aa11.64□□□□□ -0.55
MTHFD1-213ENST00000556284 ANKRD23Q86SG2 305 aa11.64□□□□□ -0.55
MTHFD1-213ENST00000556284 NBPF11Q86T75 865 aa11.64□□□□□ -0.55
MTHFD1-213ENST00000556284 TRIM22Q8IYM9 498 aa11.64□□□□□ -0.55
MTHFD1-213ENST00000556284 CCDC82Q8N4S0 544 aa11.64□□□□□ -0.55
MTHFD1-213ENST00000556284 SMARCC2Q8TAQ2 1214 aa11.64□□□□□ -0.55
MTHFD1-213ENST00000556284 BRI3BPQ8WY22 251 aa11.64□□□□□ -0.55
MTHFD1-213ENST00000556284 MTMR8Q96EF0 704 aa11.64□□□□□ -0.55
MTHFD1-213ENST00000556284 SLF1Q9BQI6 1058 aa11.64□□□□□ -0.55
MTHFD1-213ENST00000556284 RNF26Q9BY78 433 aaPredicted RBP11.64□□□□□ -0.55
MTHFD1-213ENST00000556284 HOXC10Q9NYD6 342 aa11.64□□□□□ -0.55
MTHFD1-213ENST00000556284 PPP1R9AQ9ULJ8 1098 aa11.64□□□□□ -0.55
MTHFD1-213ENST00000556284 STK36Q9NRP7 1315 aa11.63□□□□□ -0.55
MTHFD1-213ENST00000556284 CYTH3O43739 400 aa11.63□□□□□ -0.55
MTHFD1-213ENST00000556284 FLOT1O75955 427 aa11.63□□□□□ -0.55
MTHFD1-213ENST00000556284 FMNL1O95466 1100 aaPredicted RBP11.63□□□□□ -0.55
MTHFD1-213ENST00000556284 OSBPP22059 807 aa11.63□□□□□ -0.55
MTHFD1-213ENST00000556284 SLC16A2P36021 539 aa11.63□□□□□ -0.55
MTHFD1-213ENST00000556284 SREBF2Q12772 1141 aa11.63□□□□□ -0.55
MTHFD1-213ENST00000556284 NOGQ13253 232 aa11.63□□□□□ -0.55
MTHFD1-213ENST00000556284 SLC35G1Q2M3R5 365 aa11.63□□□□□ -0.55
MTHFD1-213ENST00000556284 TREML2Q5T2D2 321 aa11.63□□□□□ -0.55
MTHFD1-213ENST00000556284 CYP4F22Q6NT55 531 aa11.63□□□□□ -0.55
MTHFD1-213ENST00000556284 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.63□□□□□ -0.55
MTHFD1-213ENST00000556284 ADGRF4Q8IZF3 695 aa11.63□□□□□ -0.55
MTHFD1-213ENST00000556284 CMTR1Q8N1G2 835 aaKnown RBP11.63□□□□□ -0.55
MTHFD1-213ENST00000556284 PHKBQ93100 1093 aa11.63□□□□□ -0.55
MTHFD1-213ENST00000556284 RRP36Q96EU6 259 aaKnown RBP11.63□□□□□ -0.55
MTHFD1-213ENST00000556284 CAPNS2Q96L46 248 aa11.63□□□□□ -0.55
MTHFD1-213ENST00000556284 SLC26A6Q9BXS9 759 aa11.63□□□□□ -0.55
MTHFD1-213ENST00000556284 JMJD4Q9H9V9 463 aa11.63□□□□□ -0.55
MTHFD1-213ENST00000556284 VAT1LQ9HCJ6 419 aa11.63□□□□□ -0.55
MTHFD1-213ENST00000556284 ZCCHC17Q9NP64 241 aaKnown RBP11.63□□□□□ -0.55
MTHFD1-213ENST00000556284 FBXO28Q9NVF7 368 aa11.63□□□□□ -0.55
MTHFD1-213ENST00000556284 ORC3Q9UBD5 711 aaPredicted RBP11.63□□□□□ -0.55
MTHFD1-213ENST00000556284 PNMA3Q9UL41 463 aa11.63□□□□□ -0.55
MTHFD1-213ENST00000556284 PRR12Q9ULL5 1215 aa11.63□□□□□ -0.55
MTHFD1-213ENST00000556284 SMC3Q9UQE7 1217 aa11.63□□□□□ -0.55
MTHFD1-213ENST00000556284 V9GY48 417 aaPredicted RBP11.63□□□□□ -0.55
MTHFD1-213ENST00000556284 CNTNAP5Q8WYK1 1306 aa11.62□□□□□ -0.55
MTHFD1-213ENST00000556284 PNMA6FA0A0J9YX94 578 aa11.62□□□□□ -0.55
MTHFD1-213ENST00000556284 PTPDC1A2A3K4 754 aa11.62□□□□□ -0.55
MTHFD1-213ENST00000556284 BTBD19C9JJ37 291 aa11.62□□□□□ -0.55
MTHFD1-213ENST00000556284 ZBED4O75132 1171 aa11.62□□□□□ -0.55
MTHFD1-213ENST00000556284 DEXIO95424 95 aa11.62□□□□□ -0.55
MTHFD1-213ENST00000556284 TM4SF4P48230 202 aa11.62□□□□□ -0.55
MTHFD1-213ENST00000556284 C1QTNF8P60827 252 aa11.62□□□□□ -0.55
MTHFD1-213ENST00000556284 IRX3P78415 501 aaPredicted RBP11.62□□□□□ -0.55
MTHFD1-213ENST00000556284 TRAF1Q13077 416 aa11.62□□□□□ -0.55
MTHFD1-213ENST00000556284 ARSIQ5FYB1 569 aa11.62□□□□□ -0.55
MTHFD1-213ENST00000556284 OTUD7BQ6GQQ9 843 aa11.62□□□□□ -0.55
MTHFD1-213ENST00000556284 GTF3C2Q8WUA4 911 aaPredicted RBP11.62□□□□□ -0.55
MTHFD1-213ENST00000556284 WASF1Q92558 559 aa11.62□□□□□ -0.55
MTHFD1-213ENST00000556284 KIFC2Q96AC6 838 aa11.62□□□□□ -0.55
MTHFD1-213ENST00000556284 IPO9Q96P70 1041 aaKnown RBP11.62□□□□□ -0.55
MTHFD1-213ENST00000556284 P2RX7Q99572 595 aaKnown RBP11.62□□□□□ -0.55
MTHFD1-213ENST00000556284 ASCC2Q9H1I8 757 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms