RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 OIP5O43482 229 aa8.6□□□□□ -1.03
ATXN3-236ENST00000556220 PDE8BO95263 885 aa8.6□□□□□ -1.03
ATXN3-236ENST00000556220 PRKCSHP14314 528 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-236ENST00000556220 CACNB2Q08289 660 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-236ENST00000556220 SHHQ15465 462 aa8.6□□□□□ -1.03
ATXN3-236ENST00000556220 WDR66Q8TBY9 1149 aa8.6□□□□□ -1.03
ATXN3-236ENST00000556220 TSR2Q969E8 191 aaKnown RBP8.6□□□□□ -1.03
ATXN3-236ENST00000556220 SENP6Q9GZR1 1112 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-236ENST00000556220 PRKAG2Q9UGJ0 569 aa8.6□□□□□ -1.03
ATXN3-236ENST00000556220 MYBBP1AQ9BQG0 1328 aaKnown RBP8.59□□□□□ -1.03
ATXN3-236ENST00000556220 F6X3S4 739 aa8.59□□□□□ -1.03
ATXN3-236ENST00000556220 ENTPD3O75355 529 aa8.59□□□□□ -1.03
ATXN3-236ENST00000556220 MSX1P28360 303 aa8.59□□□□□ -1.03
ATXN3-236ENST00000556220 CCND3P30281 292 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-236ENST00000556220 SEMA3FQ13275 785 aa8.59□□□□□ -1.03
ATXN3-236ENST00000556220 PABPC4Q13310 644 aaKnown RBP eCLIP8.59□□□□□ -1.03
ATXN3-236ENST00000556220 UBAP2LQ14157 1087 aaKnown RBP8.59□□□□□ -1.03
ATXN3-236ENST00000556220 SUZ12Q15022 739 aaKnown RBP8.59□□□□□ -1.03
ATXN3-236ENST00000556220 TLR1Q15399 786 aa8.59□□□□□ -1.03
ATXN3-236ENST00000556220 LRRC24Q50LG9 513 aa8.59□□□□□ -1.03
ATXN3-236ENST00000556220 EFHC2Q5JST6 749 aa8.59□□□□□ -1.03
ATXN3-236ENST00000556220 METTL24Q5JXM2 366 aa8.59□□□□□ -1.03
ATXN3-236ENST00000556220 C9orf50Q5SZB4 431 aa8.59□□□□□ -1.03
ATXN3-236ENST00000556220 VGLL2Q8N8G2 317 aa8.59□□□□□ -1.03
ATXN3-236ENST00000556220 IDI2Q9BXS1 227 aa8.59□□□□□ -1.03
ATXN3-236ENST00000556220 OXCT2Q9BYC2 517 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-236ENST00000556220 ASCC2Q9H1I8 757 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-236ENST00000556220 C9orf78Q9NZ63 289 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-236ENST00000556220 MORF4L1Q9UBU8 362 aa8.59□□□□□ -1.03
ATXN3-236ENST00000556220 CNTNAP5Q8WYK1 1306 aa8.58□□□□□ -1.04
ATXN3-236ENST00000556220 KIF16BQ96L93 1317 aa8.58□□□□□ -1.04
ATXN3-236ENST00000556220 TMEM265A0A087WTH1 108 aa8.58□□□□□ -1.04
ATXN3-236ENST00000556220 ZEB1P37275 1124 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-236ENST00000556220 RGS3P49796 1198 aa8.58□□□□□ -1.04
ATXN3-236ENST00000556220 MAP3K12Q12852 859 aa8.58□□□□□ -1.04
ATXN3-236ENST00000556220 SPP2Q13103 211 aa8.58□□□□□ -1.04
ATXN3-236ENST00000556220 CCDC84Q86UT8 332 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-236ENST00000556220 ZSCAN29Q8IWY8 852 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-236ENST00000556220 USP38Q8NB14 1042 aa8.58□□□□□ -1.04
ATXN3-236ENST00000556220 PLPP7Q8NBV4 271 aa8.58□□□□□ -1.04
ATXN3-236ENST00000556220 SOCS4Q8WXH5 440 aa8.58□□□□□ -1.04
ATXN3-236ENST00000556220 USP6NLQ92738 828 aa8.58□□□□□ -1.04
ATXN3-236ENST00000556220 KAZALD1Q96I82 304 aa8.58□□□□□ -1.04
ATXN3-236ENST00000556220 CRISPLD1Q9H336 500 aa8.58□□□□□ -1.04
ATXN3-236ENST00000556220 RUBCNLQ9H714 662 aa8.58□□□□□ -1.04
ATXN3-236ENST00000556220 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-236ENST00000556220 ATXN7L1Q9ULK2 861 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-236ENST00000556220 DDTLA6NHG4 134 aaPredicted RBP8.57□□□□□ -1.04
ATXN3-236ENST00000556220 STAU1O95793 577 aaKnown RBP8.57□□□□□ -1.04
ATXN3-236ENST00000556220 IFIT1P09914 478 aaKnown RBP8.57□□□□□ -1.04
ATXN3-236ENST00000556220 ZKSCAN1P17029 563 aaPredicted RBP8.57□□□□□ -1.04
ATXN3-236ENST00000556220 FGFR2P21802 821 aa8.57□□□□□ -1.04
ATXN3-236ENST00000556220 PRDX5P30044 214 aa8.57□□□□□ -1.04
ATXN3-236ENST00000556220 RTP1P59025 263 aa8.57□□□□□ -1.04
ATXN3-236ENST00000556220 ZNF280CQ8ND82 737 aa8.57□□□□□ -1.04
ATXN3-236ENST00000556220 GPRC5AQ8NFJ5 357 aa8.57□□□□□ -1.04
ATXN3-236ENST00000556220 ATXN2LQ8WWM7 1075 aaKnown RBP8.57□□□□□ -1.04
ATXN3-236ENST00000556220 SUCLG2Q96I99 432 aa8.57□□□□□ -1.04
ATXN3-236ENST00000556220 GDF2Q9UK05 429 aaPredicted RBP8.57□□□□□ -1.04
ATXN3-236ENST00000556220 DDX60LQ5H9U9 1706 aaKnown RBP8.57□□□□□ -1.04
ATXN3-236ENST00000556220 MYO9BQ13459 2157 aa8.56□□□□□ -1.04
ATXN3-236ENST00000556220 VAMP4O75379 141 aa8.56□□□□□ -1.04
ATXN3-236ENST00000556220 ALDH1L1O75891 902 aa8.56□□□□□ -1.04
ATXN3-236ENST00000556220 LDHBP07195 334 aaKnown RBP8.56□□□□□ -1.04
ATXN3-236ENST00000556220 MAPK4P31152 587 aa8.56□□□□□ -1.04
ATXN3-236ENST00000556220 RGS2P41220 211 aa8.56□□□□□ -1.04
ATXN3-236ENST00000556220 HMGCS2P54868 508 aa8.56□□□□□ -1.04
ATXN3-236ENST00000556220 GDF10P55107 478 aa8.56□□□□□ -1.04
ATXN3-236ENST00000556220 PDE3AQ14432 1141 aa8.56□□□□□ -1.04
ATXN3-236ENST00000556220 MCM6Q14566 821 aa8.56□□□□□ -1.04
ATXN3-236ENST00000556220 GRIN2CQ14957 1233 aa8.56□□□□□ -1.04
ATXN3-236ENST00000556220 PUM3Q15397 648 aaKnown RBP8.56□□□□□ -1.04
ATXN3-236ENST00000556220 CCL14Q16627 93 aa8.56□□□□□ -1.04
ATXN3-236ENST00000556220 C1orf216Q8TAB5 229 aa8.56□□□□□ -1.04
ATXN3-236ENST00000556220 BADQ92934 168 aa8.56□□□□□ -1.04
ATXN3-236ENST00000556220 P2RX7Q99572 595 aaKnown RBP8.56□□□□□ -1.04
ATXN3-236ENST00000556220 TXNRD2Q9NNW7 524 aa8.56□□□□□ -1.04
ATXN3-236ENST00000556220 BDP1A6H8Y1 2624 aa8.56□□□□□ -1.04
ATXN3-236ENST00000556220 DNM1LO00429 736 aa8.55□□□□□ -1.04
ATXN3-236ENST00000556220 MSCO60682 206 aa8.55□□□□□ -1.04
ATXN3-236ENST00000556220 PEX10O60683 326 aa8.55□□□□□ -1.04
ATXN3-236ENST00000556220 HOXA7P31268 230 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-236ENST00000556220 IRX3P78415 501 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-236ENST00000556220 RABL6Q3YEC7 729 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-236ENST00000556220 TBC1D9Q6ZT07 1266 aa8.55□□□□□ -1.04
ATXN3-236ENST00000556220 LPAR1Q92633 364 aa8.55□□□□□ -1.04
ATXN3-236ENST00000556220 ASB2Q96Q27 587 aa8.55□□□□□ -1.04
ATXN3-236ENST00000556220 NIFKQ9BYG3 293 aaKnown RBP8.55□□□□□ -1.04
ATXN3-236ENST00000556220 OSBPL5Q9H0X9 879 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-236ENST00000556220 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.55□□□□□ -1.04
ATXN3-236ENST00000556220 DDX4Q9NQI0 724 aaKnown RBP8.55□□□□□ -1.04
ATXN3-236ENST00000556220 RBPJLQ9UBG7 517 aa8.55□□□□□ -1.04
ATXN3-236ENST00000556220 ATP11BQ9Y2G3 1177 aa8.55□□□□□ -1.04
ATXN3-236ENST00000556220 AK9Q5TCS8 1911 aa8.54□□□□□ -1.04
ATXN3-236ENST00000556220 LOC100996750A0A140TA64 210 aa8.54□□□□□ -1.04
ATXN3-236ENST00000556220 USP17L5A8MUK1 530 aa8.54□□□□□ -1.04
ATXN3-236ENST00000556220 NBPF7P0C2Y1 421 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-236ENST00000556220 SLC5A1P13866 664 aa8.54□□□□□ -1.04
ATXN3-236ENST00000556220 SMTNP53814 917 aa8.54□□□□□ -1.04
ATXN3-236ENST00000556220 MFSD14CQ5VZR4 134 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms