RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 ZNF576Q9H609 170 aa18.43■□□□□ 0.54
SUPT16H-205ENST00000556217 SLC38A10Q9HBR0 1119 aa18.43■□□□□ 0.54
SUPT16H-205ENST00000556217 RAVER2Q9HCJ3 691 aaKnown RBP18.43■□□□□ 0.54
SUPT16H-205ENST00000556217 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.43■□□□□ 0.54
SUPT16H-205ENST00000556217 RNF113AO15541 343 aaKnown RBP18.42■□□□□ 0.54
SUPT16H-205ENST00000556217 SMARCA5O60264 1052 aaPredicted RBP18.42■□□□□ 0.54
SUPT16H-205ENST00000556217 APPP05067 770 aa18.42■□□□□ 0.54
SUPT16H-205ENST00000556217 PPIGQ13427 754 aaKnown RBP eCLIP18.42■□□□□ 0.543e-6■□□□□ 10.4
SUPT16H-205ENST00000556217 LRRFIP1Q32MZ4 808 aaKnown RBP18.42■□□□□ 0.54
SUPT16H-205ENST00000556217 MFSD5Q6N075 450 aa18.42■□□□□ 0.54
SUPT16H-205ENST00000556217 MKL1Q969V6 931 aa18.42■□□□□ 0.54
SUPT16H-205ENST00000556217 ASB2Q96Q27 587 aa18.42■□□□□ 0.54
SUPT16H-205ENST00000556217 TBX21Q9UL17 535 aa18.42■□□□□ 0.54
SUPT16H-205ENST00000556217 IGKV6D-41A0A0C4DH26 115 aa18.41■□□□□ 0.54
SUPT16H-205ENST00000556217 A0A0U1RQG5 324 aaPredicted RBP18.41■□□□□ 0.54
SUPT16H-205ENST00000556217 TTLL1O95922 423 aa18.41■□□□□ 0.54
SUPT16H-205ENST00000556217 ASGR1P07306 291 aa18.41■□□□□ 0.54
SUPT16H-205ENST00000556217 FDX1P10109 184 aa18.41■□□□□ 0.54
SUPT16H-205ENST00000556217 CCDC144BQ3MJ40 725 aa18.41■□□□□ 0.54
SUPT16H-205ENST00000556217 GMCL1P1Q8NEA9 526 aa18.41■□□□□ 0.54
SUPT16H-205ENST00000556217 ADAMTS19Q8TE59 1207 aa18.41■□□□□ 0.54
SUPT16H-205ENST00000556217 OSBP2Q969R2 916 aa18.41■□□□□ 0.54
SUPT16H-205ENST00000556217 CEP95Q96GE4 821 aa18.41■□□□□ 0.54
SUPT16H-205ENST00000556217 GAS2L1Q99501 681 aaPredicted RBP18.41■□□□□ 0.54
SUPT16H-205ENST00000556217 UPF3AQ9H1J1 476 aaKnown RBP18.41■□□□□ 0.54
SUPT16H-205ENST00000556217 MTMR4Q9NYA4 1195 aa18.41■□□□□ 0.54
SUPT16H-205ENST00000556217 THEGQ9P2T0 379 aa18.41■□□□□ 0.54
SUPT16H-205ENST00000556217 MYADML2A6NDP7 307 aa18.4■□□□□ 0.54
SUPT16H-205ENST00000556217 TLR3O15455 904 aaKnown RBP18.4■□□□□ 0.54
SUPT16H-205ENST00000556217 GPAA1O43292 621 aa18.4■□□□□ 0.54
SUPT16H-205ENST00000556217 CDK7P50613 346 aa18.4■□□□□ 0.54
SUPT16H-205ENST00000556217 GJA9P57773 515 aa18.4■□□□□ 0.54
SUPT16H-205ENST00000556217 GNASQ5JWF2 1037 aa18.4■□□□□ 0.54
SUPT16H-205ENST00000556217 AKNAD1Q5T1N1 836 aa18.4■□□□□ 0.54
SUPT16H-205ENST00000556217 ARMCX2Q7L311 632 aa18.4■□□□□ 0.54
SUPT16H-205ENST00000556217 TMEM199Q8N511 208 aa18.4■□□□□ 0.54
SUPT16H-205ENST00000556217 PPM1EQ8WY54 764 aa18.4■□□□□ 0.54
SUPT16H-205ENST00000556217 TIFAQ96CG3 184 aa18.4■□□□□ 0.54
SUPT16H-205ENST00000556217 RCAN3Q9UKA8 241 aa18.4■□□□□ 0.54
SUPT16H-205ENST00000556217 ARVCFO00192 962 aa18.39■□□□□ 0.53
SUPT16H-205ENST00000556217 PRDM1O75626 825 aa18.39■□□□□ 0.53
SUPT16H-205ENST00000556217 SLC3A2P08195 630 aaKnown RBP18.39■□□□□ 0.53
SUPT16H-205ENST00000556217 BMP3P12645 472 aa18.39■□□□□ 0.53
SUPT16H-205ENST00000556217 MRPS5P82675 430 aaKnown RBP18.39■□□□□ 0.53
SUPT16H-205ENST00000556217 PDE4BQ07343 736 aa18.39■□□□□ 0.53
SUPT16H-205ENST00000556217 CCDC144CPQ8IYA2 1237 aa18.39■□□□□ 0.53
SUPT16H-205ENST00000556217 LRRC47Q8N1G4 583 aaKnown RBP18.39■□□□□ 0.53
SUPT16H-205ENST00000556217 IL27Q8NEV9 243 aa18.39■□□□□ 0.53
SUPT16H-205ENST00000556217 UHRF1Q96T88 793 aaPredicted RBP18.39■□□□□ 0.53
SUPT16H-205ENST00000556217 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.39■□□□□ 0.533e-13■■■■□ 24.3
SUPT16H-205ENST00000556217 NACAP1Q9BZK3 213 aa18.39■□□□□ 0.53
SUPT16H-205ENST00000556217 EPB41L4AQ9HCS5 686 aaPredicted RBP18.39■□□□□ 0.53
SUPT16H-205ENST00000556217 ISY1Q9ULR0 285 aaKnown RBP18.39■□□□□ 0.53
SUPT16H-205ENST00000556217 PATL2C9JE40 543 aaKnown RBP18.38■□□□□ 0.53
SUPT16H-205ENST00000556217 TSPY3P0CV98 308 aa18.38■□□□□ 0.53
SUPT16H-205ENST00000556217 TSPY8P0CW00 308 aa18.38■□□□□ 0.53
SUPT16H-205ENST00000556217 HOXD11P31277 338 aaPredicted RBP18.38■□□□□ 0.53
SUPT16H-205ENST00000556217 SLFN13Q68D06 897 aa18.38■□□□□ 0.53
SUPT16H-205ENST00000556217 PSRC1Q6PGN9 363 aaPredicted RBP18.38■□□□□ 0.53
SUPT16H-205ENST00000556217 ACAD9Q9H845 621 aa18.38■□□□□ 0.53
SUPT16H-205ENST00000556217 HOMER2Q9NSB8 354 aa18.38■□□□□ 0.53
SUPT16H-205ENST00000556217 ADCY6O43306 1168 aa18.37■□□□□ 0.53
SUPT16H-205ENST00000556217 STAT2P52630 851 aa18.37■□□□□ 0.53
SUPT16H-205ENST00000556217 PPP4R3BQ5MIZ7 849 aa18.37■□□□□ 0.53
SUPT16H-205ENST00000556217 DIEXFQ68CQ4 756 aaKnown RBP18.37■□□□□ 0.53
SUPT16H-205ENST00000556217 CCDC129Q6ZRS4 1044 aa18.37■□□□□ 0.53
SUPT16H-205ENST00000556217 NOL8Q76FK4 1167 aaKnown RBP18.37■□□□□ 0.53
SUPT16H-205ENST00000556217 IFNL3Q8IZI9 196 aa18.37■□□□□ 0.53
SUPT16H-205ENST00000556217 NEDD1Q8NHV4 660 aa18.37■□□□□ 0.53
SUPT16H-205ENST00000556217 CHURC1Q8WUH1 139 aa18.37■□□□□ 0.53
SUPT16H-205ENST00000556217 FGD4Q96M96 766 aa18.37■□□□□ 0.53
SUPT16H-205ENST00000556217 PLIN4Q96Q06 1357 aa18.37■□□□□ 0.53
SUPT16H-205ENST00000556217 ASB14A6NK59 587 aa18.36■□□□□ 0.53
SUPT16H-205ENST00000556217 TMEM232C9JQI7 657 aa18.36■□□□□ 0.53
SUPT16H-205ENST00000556217 M0R2C6 588 aa18.36■□□□□ 0.53
SUPT16H-205ENST00000556217 CSF2RAP15509 400 aa18.36■□□□□ 0.53
SUPT16H-205ENST00000556217 NKX3-2P78367 333 aa18.36■□□□□ 0.53
SUPT16H-205ENST00000556217 IRX5P78411 483 aaPredicted RBP18.36■□□□□ 0.53
SUPT16H-205ENST00000556217 TNFAIP2Q03169 654 aa18.36■□□□□ 0.53
SUPT16H-205ENST00000556217 IKQ13123 557 aaPredicted RBP18.36■□□□□ 0.53
SUPT16H-205ENST00000556217 TKFCQ3LXA3 575 aa18.36■□□□□ 0.53
SUPT16H-205ENST00000556217 TMEM240Q5SV17 173 aa18.36■□□□□ 0.53
SUPT16H-205ENST00000556217 FAM160B2Q86V87 743 aa18.36■□□□□ 0.53
SUPT16H-205ENST00000556217 FAM126BQ8IXS8 530 aa18.36■□□□□ 0.53
SUPT16H-205ENST00000556217 C1QTNF1Q9BXJ1 281 aa18.36■□□□□ 0.53
SUPT16H-205ENST00000556217 CABYRO75952 493 aa18.35■□□□□ 0.53
SUPT16H-205ENST00000556217 CNTN2Q02246 1040 aa18.35■□□□□ 0.53
SUPT16H-205ENST00000556217 RASIP1Q5U651 963 aa18.35■□□□□ 0.53
SUPT16H-205ENST00000556217 C16orf59Q7L2K0 433 aa18.35■□□□□ 0.53
SUPT16H-205ENST00000556217 FAM133AQ8N9E0 248 aa18.35■□□□□ 0.53
SUPT16H-205ENST00000556217 GMCL1Q96IK5 515 aa18.35■□□□□ 0.53
SUPT16H-205ENST00000556217 PPP1R12CQ9BZL4 782 aa18.35■□□□□ 0.53
SUPT16H-205ENST00000556217 KATNBL1Q9H079 304 aa18.35■□□□□ 0.53
SUPT16H-205ENST00000556217 MTIF3Q9H2K0 278 aaKnown RBP18.35■□□□□ 0.53
SUPT16H-205ENST00000556217 DCTPP1Q9H773 170 aa18.35■□□□□ 0.53
SUPT16H-205ENST00000556217 RNF146Q9NTX7 359 aa18.35■□□□□ 0.53
SUPT16H-205ENST00000556217 ZEB2O60315 1214 aa18.34■□□□□ 0.53
SUPT16H-205ENST00000556217 SLC1A4P43007 532 aa18.34■□□□□ 0.53
SUPT16H-205ENST00000556217 TFAP4Q01664 338 aa18.34■□□□□ 0.53
SUPT16H-205ENST00000556217 TSHZ3Q63HK5 1081 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms