RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	SLC4A9	Q96Q91	983 aa		13.71	□□□□□ -0.21
TMPO-212	ENST00000556029	TACC3	Q9Y6A5	838 aa		13.71	□□□□□ -0.21
TMPO-212	ENST00000556029	CTAGE9	A4FU28	777 aa		13.71	□□□□□ -0.22
TMPO-212	ENST00000556029	RPS6KA4	O75676	772 aa		13.71	□□□□□ -0.22
TMPO-212	ENST00000556029	HMGB2	P26583	209 aa	Known RBP	13.71	□□□□□ -0.22
TMPO-212	ENST00000556029	STAT6	P42226	847 aa		13.71	□□□□□ -0.22
TMPO-212	ENST00000556029	LETM2	Q2VYF4	491 aa		13.71	□□□□□ -0.22
TMPO-212	ENST00000556029	CNGA4	Q8IV77	575 aa		13.71	□□□□□ -0.22
TMPO-212	ENST00000556029	VPS16	Q9H269	839 aa		13.71	□□□□□ -0.22
TMPO-212	ENST00000556029	EBAG9	O00559	213 aa		13.7	□□□□□ -0.22
TMPO-212	ENST00000556029	SCLT1	Q96NL6	688 aa		13.7	□□□□□ -0.22
TMPO-212	ENST00000556029	EYA3	Q99504	573 aa		13.7	□□□□□ -0.22
TMPO-212	ENST00000556029	MTA3	Q9BTC8	594 aa		13.7	□□□□□ -0.22
TMPO-212	ENST00000556029	SPATA31A1	Q5TZJ5	1347 aa		13.7	□□□□□ -0.22
TMPO-212	ENST00000556029	ZNF18	P17022	549 aa		13.7	□□□□□ -0.22
TMPO-212	ENST00000556029	GNAQ	P50148	359 aa		13.7	□□□□□ -0.22
TMPO-212	ENST00000556029	PTGDR	Q13258	359 aa		13.7	□□□□□ -0.22
TMPO-212	ENST00000556029	NR1I3	Q14994	352 aa		13.7	□□□□□ -0.22
TMPO-212	ENST00000556029	ENAH	Q8N8S7	591 aa	Predicted RBP	13.7	□□□□□ -0.22
TMPO-212	ENST00000556029	CCDC97	Q96F63	343 aa	Predicted RBP	13.7	□□□□□ -0.22
TMPO-212	ENST00000556029	MINPP1	Q9UNW1	487 aa		13.7	□□□□□ -0.22
TMPO-212	ENST00000556029	PARP4	Q9UKK3	1724 aa	Known RBP	13.7	□□□□□ -0.22
TMPO-212	ENST00000556029	CASP14	P31944	242 aa		13.7	□□□□□ -0.22
TMPO-212	ENST00000556029	SARS	P49591	514 aa	Known RBP	13.7	□□□□□ -0.22
TMPO-212	ENST00000556029	RCAN1	P53805	252 aa		13.7	□□□□□ -0.22
TMPO-212	ENST00000556029	TBX2	Q13207	712 aa	Predicted RBP	13.7	□□□□□ -0.22
TMPO-212	ENST00000556029	CCDC25	Q86WR0	208 aa		13.7	□□□□□ -0.22
TMPO-212	ENST00000556029	GSDMA	Q96QA5	445 aa		13.7	□□□□□ -0.22
TMPO-212	ENST00000556029	FHOD1	Q9Y613	1164 aa		13.7	□□□□□ -0.22
TMPO-212	ENST00000556029	NWD2	Q9ULI1	1742 aa		13.7	□□□□□ -0.22
TMPO-212	ENST00000556029	PRPF3	O43395	683 aa	Known RBP	13.69	□□□□□ -0.22
TMPO-212	ENST00000556029	KIF5A	Q12840	1032 aa		13.69	□□□□□ -0.22
TMPO-212	ENST00000556029	OTUD6B	Q8N6M0	293 aa		13.69	□□□□□ -0.22
TMPO-212	ENST00000556029	PANX2	Q96RD6	677 aa		13.69	□□□□□ -0.22
TMPO-212	ENST00000556029	USP17L8	P0C7I0	530 aa		13.69	□□□□□ -0.22
TMPO-212	ENST00000556029	CCDC6	Q16204	474 aa		13.69	□□□□□ -0.22
TMPO-212	ENST00000556029	NT5DC1	Q5TFE4	455 aa		13.69	□□□□□ -0.22
TMPO-212	ENST00000556029	IRX2	Q9BZI1	471 aa	Predicted RBP	13.69	□□□□□ -0.22
TMPO-212	ENST00000556029	DBNDD1	Q9H9R9	158 aa		13.69	□□□□□ -0.22
TMPO-212	ENST00000556029	HOMER2	Q9NSB8	354 aa		13.69	□□□□□ -0.22
TMPO-212	ENST00000556029	EXOC1	Q9NV70	894 aa		13.69	□□□□□ -0.22
TMPO-212	ENST00000556029	NUP188	Q5SRE5	1749 aa		13.69	□□□□□ -0.22
TMPO-212	ENST00000556029		A0A1B0GTH6	734 aa		13.69	□□□□□ -0.22
TMPO-212	ENST00000556029	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.69	□□□□□ -0.22
TMPO-212	ENST00000556029	MYZAP	P0CAP1	466 aa		13.69	□□□□□ -0.22
TMPO-212	ENST00000556029	CYLC1	P35663	651 aa	Predicted RBP	13.69	□□□□□ -0.22
TMPO-212	ENST00000556029	BTD	P43251	543 aa		13.69	□□□□□ -0.22
TMPO-212	ENST00000556029	MAP3K9	P80192	1104 aa		13.69	□□□□□ -0.22
TMPO-212	ENST00000556029	UBXN1	Q04323	297 aa		13.69	□□□□□ -0.22
TMPO-212	ENST00000556029	CCDC91	Q7Z6B0	441 aa		13.69	□□□□□ -0.22
TMPO-212	ENST00000556029	DYNLL2	Q96FJ2	89 aa		13.69	□□□□□ -0.22
TMPO-212	ENST00000556029	MRFAP1	Q9Y605	127 aa		13.69	□□□□□ -0.22
TMPO-212	ENST00000556029	ECM2	O94769	699 aa	Predicted RBP	13.69	□□□□□ -0.22
TMPO-212	ENST00000556029	FGFR1OP	O95684	399 aa	Known RBP	13.69	□□□□□ -0.22
TMPO-212	ENST00000556029	PARP1	P09874	1014 aa	Known RBP	13.69	□□□□□ -0.22
TMPO-212	ENST00000556029	HPD	P32754	393 aa	Predicted RBP	13.69	□□□□□ -0.22
TMPO-212	ENST00000556029	TMEM139	Q8IV31	216 aa		13.69	□□□□□ -0.22
TMPO-212	ENST00000556029	PYM1	Q9BRP8	204 aa	Known RBP	13.69	□□□□□ -0.22
TMPO-212	ENST00000556029	USP40	Q9NVE5	1235 aa		13.69	□□□□□ -0.22
TMPO-212	ENST00000556029	POTEJ	P0CG39	1038 aa		13.68	□□□□□ -0.22
TMPO-212	ENST00000556029	SPAG1	Q07617	926 aa		13.68	□□□□□ -0.22
TMPO-212	ENST00000556029	LARGE2	Q8N3Y3	721 aa		13.68	□□□□□ -0.22
TMPO-212	ENST00000556029	RRP36	Q96EU6	259 aa	Known RBP	13.68	□□□□□ -0.22
TMPO-212	ENST00000556029	GJD4	Q96KN9	370 aa	Predicted RBP	13.68	□□□□□ -0.22
TMPO-212	ENST00000556029	PARD6B	Q9BYG5	372 aa		13.68	□□□□□ -0.22
TMPO-212	ENST00000556029	TAB2	Q9NYJ8	693 aa		13.68	□□□□□ -0.22
TMPO-212	ENST00000556029	TMEM110-MUSTN1	A8MSY1	372 aa		13.68	□□□□□ -0.22
TMPO-212	ENST00000556029	POTEB2	H3BUK9	544 aa		13.68	□□□□□ -0.22
TMPO-212	ENST00000556029	KRT13	P13646	458 aa		13.68	□□□□□ -0.22
TMPO-212	ENST00000556029	IRX5	P78411	483 aa	Predicted RBP	13.68	□□□□□ -0.22
TMPO-212	ENST00000556029	LINC00116	Q8NCU8	138 aa		13.68	□□□□□ -0.22
TMPO-212	ENST00000556029	RABGGTA	Q92696	567 aa		13.68	□□□□□ -0.22
TMPO-212	ENST00000556029	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.68	□□□□□ -0.22	2e-7	■□□□□ 10.9
TMPO-212	ENST00000556029	MRPL44	Q9H9J2	332 aa	Known RBP	13.68	□□□□□ -0.22
TMPO-212	ENST00000556029	NARF	Q9UHQ1	456 aa		13.68	□□□□□ -0.22
TMPO-212	ENST00000556029	GJA3	Q9Y6H8	435 aa		13.68	□□□□□ -0.22
TMPO-212	ENST00000556029		A0A1W2PRG0	241 aa		13.68	□□□□□ -0.22
TMPO-212	ENST00000556029	TTLL12	Q14166	644 aa	Predicted RBP	13.68	□□□□□ -0.22
TMPO-212	ENST00000556029	GRIPAP1	Q4V328	841 aa		13.68	□□□□□ -0.22
TMPO-212	ENST00000556029	C2CD5	Q86YS7	1000 aa		13.68	□□□□□ -0.22
TMPO-212	ENST00000556029	RMND1	Q9NWS8	449 aa		13.68	□□□□□ -0.22
TMPO-212	ENST00000556029	CYP2D6	P10635	497 aa		13.67	□□□□□ -0.22
TMPO-212	ENST00000556029	OAS2	P29728	719 aa	Known RBP	13.67	□□□□□ -0.22
TMPO-212	ENST00000556029	PAK1	Q13153	545 aa		13.67	□□□□□ -0.22
TMPO-212	ENST00000556029	CPLX4	Q7Z7G2	160 aa		13.67	□□□□□ -0.22
TMPO-212	ENST00000556029	EEF2KMT	Q96G04	330 aa		13.67	□□□□□ -0.22
TMPO-212	ENST00000556029	PHF20	Q9BVI0	1012 aa		13.67	□□□□□ -0.22
TMPO-212	ENST00000556029	GLI3	P10071	1580 aa		13.67	□□□□□ -0.22
TMPO-212	ENST00000556029	MMP10	P09238	476 aa		13.67	□□□□□ -0.22
TMPO-212	ENST00000556029	PLCB3	Q01970	1234 aa		13.67	□□□□□ -0.22
TMPO-212	ENST00000556029	MECOM	Q03112	1051 aa		13.67	□□□□□ -0.22
TMPO-212	ENST00000556029	ADGRA1	Q86SQ6	560 aa		13.67	□□□□□ -0.22
TMPO-212	ENST00000556029	KSR1	Q8IVT5	923 aa		13.67	□□□□□ -0.22
TMPO-212	ENST00000556029	LRRC47	Q8N1G4	583 aa	Known RBP	13.67	□□□□□ -0.22
TMPO-212	ENST00000556029	SELENOS	Q9BQE4	189 aa		13.67	□□□□□ -0.22
TMPO-212	ENST00000556029	PSMA7	O14818	248 aa		13.67	□□□□□ -0.22
TMPO-212	ENST00000556029	CD44	P16070	742 aa	Known RBP	13.67	□□□□□ -0.22
TMPO-212	ENST00000556029	AMPD3	Q01432	767 aa		13.67	□□□□□ -0.22
TMPO-212	ENST00000556029	CC2D1A	Q6P1N0	951 aa	Predicted RBP	13.67	□□□□□ -0.22
TMPO-212	ENST00000556029	ADGRG1	Q9Y653	693 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms