RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 TMEM39AQ9NV64 488 aa17.14■□□□□ 0.33
CHMP4BP1-201ENST00000556017 FEM1BQ9UK73 627 aa17.14■□□□□ 0.33
CHMP4BP1-201ENST00000556017 ZHX1Q9UKY1 873 aaPredicted RBP17.14■□□□□ 0.33
CHMP4BP1-201ENST00000556017 PCDHB15Q9Y5E8 787 aa17.14■□□□□ 0.33
CHMP4BP1-201ENST00000556017 SALL3Q9BXA9 1300 aa17.14■□□□□ 0.33
CHMP4BP1-201ENST00000556017 GBF1Q92538 1859 aa17.14■□□□□ 0.33
CHMP4BP1-201ENST00000556017 TTLL1O95922 423 aa17.13■□□□□ 0.33
CHMP4BP1-201ENST00000556017 GNAT2P19087 354 aa17.13■□□□□ 0.33
CHMP4BP1-201ENST00000556017 PTGS1P23219 599 aa17.13■□□□□ 0.33
CHMP4BP1-201ENST00000556017 TDO2P48775 406 aa17.13■□□□□ 0.33
CHMP4BP1-201ENST00000556017 GJA9P57773 515 aa17.13■□□□□ 0.33
CHMP4BP1-201ENST00000556017 FPGSQ05932 587 aa17.13■□□□□ 0.33
CHMP4BP1-201ENST00000556017 CCDC144BQ3MJ40 725 aa17.13■□□□□ 0.33
CHMP4BP1-201ENST00000556017 ZMYM1Q5SVZ6 1142 aa17.13■□□□□ 0.33
CHMP4BP1-201ENST00000556017 RASIP1Q5U651 963 aa17.13■□□□□ 0.33
CHMP4BP1-201ENST00000556017 ARMCX2Q7L311 632 aa17.13■□□□□ 0.33
CHMP4BP1-201ENST00000556017 RASGRP2Q7LDG7 609 aa17.13■□□□□ 0.33
CHMP4BP1-201ENST00000556017 CCDC144CPQ8IYA2 1237 aa17.13■□□□□ 0.33
CHMP4BP1-201ENST00000556017 MAFAQ8NHW3 353 aaPredicted RBP17.13■□□□□ 0.33
CHMP4BP1-201ENST00000556017 RNPC3Q96LT9 517 aaKnown RBP17.13■□□□□ 0.33
CHMP4BP1-201ENST00000556017 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.13■□□□□ 0.33
CHMP4BP1-201ENST00000556017 DDX49Q9Y6V7 483 aaKnown RBP17.13■□□□□ 0.33
CHMP4BP1-201ENST00000556017 MYO9BQ13459 2157 aa17.13■□□□□ 0.33
CHMP4BP1-201ENST00000556017 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.12■□□□□ 0.33
CHMP4BP1-201ENST00000556017 SOWAHBA6NEL2 793 aa17.12■□□□□ 0.33
CHMP4BP1-201ENST00000556017 ZBED4O75132 1171 aa17.12■□□□□ 0.33
CHMP4BP1-201ENST00000556017 TIMP1P01033 207 aa17.12■□□□□ 0.33
CHMP4BP1-201ENST00000556017 ASGR1P07306 291 aa17.12■□□□□ 0.33
CHMP4BP1-201ENST00000556017 BMP3P12645 472 aa17.12■□□□□ 0.33
CHMP4BP1-201ENST00000556017 OAZ1P54368 228 aa17.12■□□□□ 0.33
CHMP4BP1-201ENST00000556017 SLFN13Q68D06 897 aa17.12■□□□□ 0.33
CHMP4BP1-201ENST00000556017 CHST13Q8NET6 341 aa17.12■□□□□ 0.33
CHMP4BP1-201ENST00000556017 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.12■□□□□ 0.335e-7■□□□□ 10.6
CHMP4BP1-201ENST00000556017 ABHD16BQ9H3Z7 469 aa17.12■□□□□ 0.33
CHMP4BP1-201ENST00000556017 INCENPQ9NQS7 918 aa17.12■□□□□ 0.33
CHMP4BP1-201ENST00000556017 IL17RBQ9NRM6 502 aa17.12■□□□□ 0.33
CHMP4BP1-201ENST00000556017 ELP1O95163 1332 aa17.12■□□□□ 0.33
CHMP4BP1-201ENST00000556017 TMEM265A0A087WTH1 108 aa17.11■□□□□ 0.33
CHMP4BP1-201ENST00000556017 SLC4A3P48751 1232 aa17.11■□□□□ 0.33
CHMP4BP1-201ENST00000556017 GRIN2CQ14957 1233 aa17.11■□□□□ 0.33
CHMP4BP1-201ENST00000556017 TMEM63BQ5T3F8 832 aa17.11■□□□□ 0.33
CHMP4BP1-201ENST00000556017 MFSD5Q6N075 450 aa17.11■□□□□ 0.33
CHMP4BP1-201ENST00000556017 FAM126BQ8IXS8 530 aa17.11■□□□□ 0.33
CHMP4BP1-201ENST00000556017 ZNF444Q8N0Y2 327 aaPredicted RBP17.11■□□□□ 0.33
CHMP4BP1-201ENST00000556017 ANKRD35Q8N283 1001 aa17.11■□□□□ 0.33
CHMP4BP1-201ENST00000556017 NUP133Q8WUM0 1156 aa17.11■□□□□ 0.33
CHMP4BP1-201ENST00000556017 AGBL1Q96MI9 1066 aa17.11■□□□□ 0.33
CHMP4BP1-201ENST00000556017 A1CFQ9NQ94 594 aaKnown RBP17.11■□□□□ 0.33
CHMP4BP1-201ENST00000556017 DCDC2CA8MYV0 355 aa17.1■□□□□ 0.33
CHMP4BP1-201ENST00000556017 TMEM232C9JQI7 657 aa17.1■□□□□ 0.33
CHMP4BP1-201ENST00000556017 CD4P01730 458 aa17.1■□□□□ 0.33
CHMP4BP1-201ENST00000556017 APPP05067 770 aa17.1■□□□□ 0.33
CHMP4BP1-201ENST00000556017 C6orf222P0C671 652 aaPredicted RBP17.1■□□□□ 0.33
CHMP4BP1-201ENST00000556017 NOVP48745 357 aa17.1■□□□□ 0.33
CHMP4BP1-201ENST00000556017 TFAP4Q01664 338 aa17.1■□□□□ 0.33
CHMP4BP1-201ENST00000556017 PPARAQ07869 468 aa17.1■□□□□ 0.33
CHMP4BP1-201ENST00000556017 TMEM240Q5SV17 173 aa17.1■□□□□ 0.33
CHMP4BP1-201ENST00000556017 USP38Q8NB14 1042 aa17.1■□□□□ 0.33
CHMP4BP1-201ENST00000556017 SLC43A3Q8NBI5 491 aa17.1■□□□□ 0.33
CHMP4BP1-201ENST00000556017 GMCL1Q96IK5 515 aa17.1■□□□□ 0.33
CHMP4BP1-201ENST00000556017 HOMER2Q9NSB8 354 aa17.1■□□□□ 0.33
CHMP4BP1-201ENST00000556017 FBXO40Q9UH90 709 aa17.1■□□□□ 0.33
CHMP4BP1-201ENST00000556017 GNEQ9Y223 722 aaKnown RBP17.1■□□□□ 0.33
CHMP4BP1-201ENST00000556017 GRIN2DO15399 1336 aa17.1■□□□□ 0.33
CHMP4BP1-201ENST00000556017 TTC41PQ6P2S7 1318 aa17.1■□□□□ 0.33
CHMP4BP1-201ENST00000556017 NMT2O60551 498 aa17.09■□□□□ 0.33
CHMP4BP1-201ENST00000556017 DNAJB2P25686 324 aa17.09■□□□□ 0.33
CHMP4BP1-201ENST00000556017 BEX3Q00994 111 aa17.09■□□□□ 0.33
CHMP4BP1-201ENST00000556017 CCDC129Q6ZRS4 1044 aa17.09■□□□□ 0.33
CHMP4BP1-201ENST00000556017 CHMP4CQ96CF2 233 aa17.09■□□□□ 0.33
CHMP4BP1-201ENST00000556017 VWCEQ96DN2 955 aa17.09■□□□□ 0.33
CHMP4BP1-201ENST00000556017 GPATCH3Q96I76 525 aa17.09■□□□□ 0.33
CHMP4BP1-201ENST00000556017 GLT1D1Q96MS3 346 aa17.09■□□□□ 0.33
CHMP4BP1-201ENST00000556017 GRXCR1A8MXD5 290 aa17.08■□□□□ 0.32
CHMP4BP1-201ENST00000556017 ARVCFO00192 962 aa17.08■□□□□ 0.32
CHMP4BP1-201ENST00000556017 PLA2G6O60733 806 aa17.08■□□□□ 0.32
CHMP4BP1-201ENST00000556017 TSPY3P0CV98 308 aa17.08■□□□□ 0.32
CHMP4BP1-201ENST00000556017 TSPY8P0CW00 308 aa17.08■□□□□ 0.32
CHMP4BP1-201ENST00000556017 CSF2RAP15509 400 aa17.08■□□□□ 0.32
CHMP4BP1-201ENST00000556017 PBX2P40425 430 aa17.08■□□□□ 0.32
CHMP4BP1-201ENST00000556017 SNAP25P60880 206 aa17.08■□□□□ 0.32
CHMP4BP1-201ENST00000556017 MUM1L1Q5H9M0 696 aa17.08■□□□□ 0.32
CHMP4BP1-201ENST00000556017 GNASQ5JWF2 1037 aa17.08■□□□□ 0.32
CHMP4BP1-201ENST00000556017 PCSK9Q8NBP7 692 aaKnown RBP17.08■□□□□ 0.32
CHMP4BP1-201ENST00000556017 STAG1Q8WVM7 1258 aa17.08■□□□□ 0.32
CHMP4BP1-201ENST00000556017 ACAD9Q9H845 621 aa17.08■□□□□ 0.32
CHMP4BP1-201ENST00000556017 ZNF287Q9HBT7 754 aa17.08■□□□□ 0.32
CHMP4BP1-201ENST00000556017 RNF146Q9NTX7 359 aa17.08■□□□□ 0.32
CHMP4BP1-201ENST00000556017 TRANK1O15050 2925 aa17.07■□□□□ 0.32
CHMP4BP1-201ENST00000556017 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.07■□□□□ 0.32
CHMP4BP1-201ENST00000556017 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.07■□□□□ 0.32
CHMP4BP1-201ENST00000556017 FDX1P10109 184 aa17.07■□□□□ 0.32
CHMP4BP1-201ENST00000556017 FOSL2P15408 326 aa17.07■□□□□ 0.32
CHMP4BP1-201ENST00000556017 MCCP23508 829 aa17.07■□□□□ 0.32
CHMP4BP1-201ENST00000556017 STAT2P52630 851 aa17.07■□□□□ 0.32
CHMP4BP1-201ENST00000556017 CTDSPL2Q05D32 466 aa17.07■□□□□ 0.32
CHMP4BP1-201ENST00000556017 VPS53Q5VIR6 699 aa17.07■□□□□ 0.32
CHMP4BP1-201ENST00000556017 TAPT1Q6NXT6 567 aa17.07■□□□□ 0.32
CHMP4BP1-201ENST00000556017 KCTD1Q719H9 257 aa17.07■□□□□ 0.32
CHMP4BP1-201ENST00000556017 PURBQ96QR8 312 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms