RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 WDR19Q8NEZ3 1342 aa4.59□□□□□ -1.67
LINC00648-202ENST00000555985 ZNF213O14771 459 aa4.59□□□□□ -1.67
LINC00648-202ENST00000555985 TRAK2O60296 914 aa4.59□□□□□ -1.67
LINC00648-202ENST00000555985 PDHBP11177 359 aa4.59□□□□□ -1.67
LINC00648-202ENST00000555985 TOP1P11387 765 aaKnown RBP4.59□□□□□ -1.67
LINC00648-202ENST00000555985 FLT3LGP49771 235 aa4.59□□□□□ -1.67
LINC00648-202ENST00000555985 HAND2P61296 217 aa4.59□□□□□ -1.67
LINC00648-202ENST00000555985 IRX3P78415 501 aaPredicted RBP4.59□□□□□ -1.67
LINC00648-202ENST00000555985 ZYXQ15942 572 aaKnown RBP4.59□□□□□ -1.67
LINC00648-202ENST00000555985 ZNF792Q3KQV3 632 aa4.59□□□□□ -1.67
LINC00648-202ENST00000555985 MFSD6Q6ZSS7 791 aa4.59□□□□□ -1.67
LINC00648-202ENST00000555985 IPO4Q8TEX9 1081 aaKnown RBP4.59□□□□□ -1.67
LINC00648-202ENST00000555985 SOCS4Q8WXH5 440 aa4.59□□□□□ -1.67
LINC00648-202ENST00000555985 TRIB2Q92519 343 aa4.59□□□□□ -1.67
LINC00648-202ENST00000555985 NUP88Q99567 741 aaPredicted RBP4.59□□□□□ -1.67
LINC00648-202ENST00000555985 SLF1Q9BQI6 1058 aa4.59□□□□□ -1.67
LINC00648-202ENST00000555985 MAF1Q9H063 256 aa4.59□□□□□ -1.67
LINC00648-202ENST00000555985 RNF41Q9H4P4 317 aaPredicted RBP4.59□□□□□ -1.67
LINC00648-202ENST00000555985 CTNNA3Q9UI47 895 aa4.59□□□□□ -1.67
LINC00648-202ENST00000555985 E7EWF7 191 aa4.59□□□□□ -1.68
LINC00648-202ENST00000555985 SLC27A2O14975 620 aa4.59□□□□□ -1.68
LINC00648-202ENST00000555985 COBLO75128 1261 aa4.59□□□□□ -1.68
LINC00648-202ENST00000555985 FDX1P10109 184 aa4.59□□□□□ -1.68
LINC00648-202ENST00000555985 NKX3-2P78367 333 aa4.59□□□□□ -1.68
LINC00648-202ENST00000555985 EXOSC10Q01780 885 aaKnown RBP4.59□□□□□ -1.68
LINC00648-202ENST00000555985 KIF22Q14807 665 aa4.59□□□□□ -1.68
LINC00648-202ENST00000555985 ARHGEF6Q15052 776 aa4.59□□□□□ -1.68
LINC00648-202ENST00000555985 IMMTQ16891 758 aaKnown RBP4.59□□□□□ -1.68
LINC00648-202ENST00000555985 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.59□□□□□ -1.68
LINC00648-202ENST00000555985 PLEKHH3Q7Z736 793 aa4.59□□□□□ -1.68
LINC00648-202ENST00000555985 SPICE1Q8N0Z3 855 aa4.59□□□□□ -1.68
LINC00648-202ENST00000555985 LRRC47Q8N1G4 583 aaKnown RBP4.59□□□□□ -1.68
LINC00648-202ENST00000555985 NPLOC4Q8TAT6 608 aa4.59□□□□□ -1.68
LINC00648-202ENST00000555985 MORC4Q8TE76 937 aa4.59□□□□□ -1.68
LINC00648-202ENST00000555985 SMCR8Q8TEV9 937 aaPredicted RBP4.59□□□□□ -1.68
LINC00648-202ENST00000555985 RUFY2Q8WXA3 655 aa4.59□□□□□ -1.68
LINC00648-202ENST00000555985 ZSCAN10Q96SZ4 725 aaPredicted RBP4.59□□□□□ -1.68
LINC00648-202ENST00000555985 KATNBL1Q9H079 304 aa4.59□□□□□ -1.68
LINC00648-202ENST00000555985 MROH8Q9H579 483 aa4.59□□□□□ -1.68
LINC00648-202ENST00000555985 CNNM2Q9H8M5 875 aa4.59□□□□□ -1.68
LINC00648-202ENST00000555985 FAM13BQ9NYF5 915 aa4.59□□□□□ -1.68
LINC00648-202ENST00000555985 PCDHB8Q9UN66 801 aa4.59□□□□□ -1.68
LINC00648-202ENST00000555985 DIS3Q9Y2L1 958 aaKnown RBP4.59□□□□□ -1.68
LINC00648-202ENST00000555985 RIPK3Q9Y572 518 aa4.59□□□□□ -1.68
LINC00648-202ENST00000555985 RBM8AQ9Y5S9 174 aaKnown RBP4.59□□□□□ -1.68
LINC00648-202ENST00000555985 LTBP2Q14767 1821 aa4.59□□□□□ -1.68
LINC00648-202ENST00000555985 ASTN1O14525 1302 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 POTEFA5A3E0 1075 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 B4E1Z4 1266 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 STRNO43815 780 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 CDC45O75419 566 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 SLC25A27O95847 323 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 BMP3P12645 472 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 HOXD10P28358 340 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 GRK4P32298 578 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 ZNF543Q08ER8 600 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 MAP2K5Q13163 448 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 SLFN13Q68D06 897 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 MAMDC4Q6UXC1 1216 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 TRMT44Q8IYL2 757 aaKnown RBP4.58□□□□□ -1.68
LINC00648-202ENST00000555985 PRPF38AQ8NAV1 312 aaKnown RBP4.58□□□□□ -1.68
LINC00648-202ENST00000555985 TRPV1Q8NER1 839 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 ESR2Q92731 530 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 MAP3K14Q99558 947 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 FEZ1Q99689 392 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 APBA2Q99767 749 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 AGXT2Q9BYV1 514 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 KRT23Q9C075 422 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 SENP2Q9HC62 589 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 BMP2KQ9NSY1 1161 aaPredicted RBP4.58□□□□□ -1.68
LINC00648-202ENST00000555985 MYH6P13533 1939 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 KIAA1217Q5T5P2 1943 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 PALM3A6NDB9 673 aaPredicted RBP4.58□□□□□ -1.68
LINC00648-202ENST00000555985 TSPY2A6NKD2 308 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 ATMINO43313 823 aaPredicted RBP4.58□□□□□ -1.68
LINC00648-202ENST00000555985 KDM4AO75164 1064 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 FLOT1O75955 427 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 CYBAP13498 195 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 ERCC3P19447 782 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 COPB2P35606 906 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 PSEN1P49768 467 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 TROAPQ12815 778 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 TRIM32Q13049 653 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 CCDC178Q5BJE1 867 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 CREB3L3Q68CJ9 461 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 FAM160B2Q86V87 743 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 ZSCAN30Q86W11 494 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 STK11IPQ8N1F8 1099 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 SH3TC2Q8TF17 1288 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 CLEC4DQ8WXI8 215 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 TANGO6Q9C0B7 1094 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 LY9Q9HBG7 655 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 MAD2L2Q9UI95 211 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 PRR12Q9ULL5 1215 aa4.58□□□□□ -1.68
LINC00648-202ENST00000555985 TNKSO95271 1327 aa4.57□□□□□ -1.68
LINC00648-202ENST00000555985 TNPO2O14787 897 aaKnown RBP4.57□□□□□ -1.68
LINC00648-202ENST00000555985 OPLAHO14841 1288 aa4.57□□□□□ -1.68
LINC00648-202ENST00000555985 ADCY3O60266 1144 aa4.57□□□□□ -1.68
LINC00648-202ENST00000555985 RANBP6O60518 1105 aaKnown RBP4.57□□□□□ -1.68
LINC00648-202ENST00000555985 FMNL1O95466 1100 aaPredicted RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms