RNA–Protein interactions for RNA: ENST00000555955.3

SIX1-205, Transcript of SIX homeobox 1, humanhuman

TSL 2

Gene SIX1, Length 2,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-205ENST00000555955 CXCR5P32302 372 aa16.18■□□□□ 0.18
SIX1-205ENST00000555955 CTCFP49711 727 aaPredicted RBP16.18■□□□□ 0.18
SIX1-205ENST00000555955 COPB1P53618 953 aaKnown RBP16.18■□□□□ 0.18
SIX1-205ENST00000555955 ARMC9Q7Z3E5 817 aa16.18■□□□□ 0.18
SIX1-205ENST00000555955 ANKLE2Q86XL3 938 aa16.18■□□□□ 0.18
SIX1-205ENST00000555955 TSGA10Q9BZW7 698 aa16.18■□□□□ 0.18
SIX1-205ENST00000555955 EHD2Q9NZN4 543 aa16.18■□□□□ 0.18
SIX1-205ENST00000555955 MAP3K2Q9Y2U5 619 aa16.18■□□□□ 0.18
SIX1-205ENST00000555955 UBN2Q6ZU65 1347 aa16.18■□□□□ 0.18
SIX1-205ENST00000555955 ACTN4O43707 911 aaKnown RBP16.18■□□□□ 0.18
SIX1-205ENST00000555955 TRIM37O94972 964 aa16.18■□□□□ 0.18
SIX1-205ENST00000555955 AFMP43652 599 aa16.18■□□□□ 0.18
SIX1-205ENST00000555955 UBXN1Q04323 297 aa16.18■□□□□ 0.18
SIX1-205ENST00000555955 TTF1Q15361 905 aaPredicted RBP16.18■□□□□ 0.18
SIX1-205ENST00000555955 ZNF662Q6ZS27 426 aa16.18■□□□□ 0.18
SIX1-205ENST00000555955 ZNF572Q7Z3I7 529 aaPredicted RBP16.18■□□□□ 0.18
SIX1-205ENST00000555955 FBXL16Q8N461 479 aa16.18■□□□□ 0.18
SIX1-205ENST00000555955 NUDT16Q96DE0 195 aaKnown RBP16.18■□□□□ 0.18
SIX1-205ENST00000555955 KAZALD1Q96I82 304 aa16.18■□□□□ 0.18
SIX1-205ENST00000555955 NDST4Q9H3R1 872 aa16.18■□□□□ 0.18
SIX1-205ENST00000555955 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.18■□□□□ 0.18
SIX1-205ENST00000555955 LIMA1Q9UHB6 759 aaKnown RBP16.18■□□□□ 0.18
SIX1-205ENST00000555955 SLC12A6Q9UHW9 1150 aa16.18■□□□□ 0.18
SIX1-205ENST00000555955 LRRC10BA6NIK2 292 aa16.18■□□□□ 0.18
SIX1-205ENST00000555955 PHF20L1A8MW92 1017 aa16.18■□□□□ 0.18
SIX1-205ENST00000555955 WASLO00401 505 aaPredicted RBP16.18■□□□□ 0.18
SIX1-205ENST00000555955 GLI1P08151 1106 aa16.18■□□□□ 0.18
SIX1-205ENST00000555955 CDC37Q16543 378 aaPredicted RBP16.18■□□□□ 0.18
SIX1-205ENST00000555955 ODF2Q5BJF6 829 aa16.18■□□□□ 0.18
SIX1-205ENST00000555955 WDR59Q6PJI9 974 aa16.18■□□□□ 0.18
SIX1-205ENST00000555955 SPATA21Q7Z572 469 aa16.18■□□□□ 0.18
SIX1-205ENST00000555955 PLAAQ9Y263 795 aa16.18■□□□□ 0.18
SIX1-205ENST00000555955 RFX7Q2KHR2 1363 aa16.18■□□□□ 0.18
SIX1-205ENST00000555955 MAP3K15Q6ZN16 1313 aa16.17■□□□□ 0.18
SIX1-205ENST00000555955 SH3TC1Q8TE82 1336 aa16.17■□□□□ 0.18
SIX1-205ENST00000555955 ZSCAN5CA6NGD5 496 aaPredicted RBP16.17■□□□□ 0.18
SIX1-205ENST00000555955 CCT8L1PA6NM43 557 aa16.17■□□□□ 0.18
SIX1-205ENST00000555955 PPFIA2O75334 1257 aa16.17■□□□□ 0.18
SIX1-205ENST00000555955 CASP1P29466 404 aa16.17■□□□□ 0.18
SIX1-205ENST00000555955 HHATQ5VTY9 493 aa16.17■□□□□ 0.18
SIX1-205ENST00000555955 RAPGEF5Q92565 580 aa16.17■□□□□ 0.18
SIX1-205ENST00000555955 TMBIM4Q9HC24 238 aa16.17■□□□□ 0.18
SIX1-205ENST00000555955 EPB41L5Q9HCM4 733 aa16.17■□□□□ 0.18
SIX1-205ENST00000555955 WDR17Q8IZU2 1322 aa16.17■□□□□ 0.18
SIX1-205ENST00000555955 PRC1O43663 620 aa16.17■□□□□ 0.18
SIX1-205ENST00000555955 ABL2P42684 1182 aa16.17■□□□□ 0.18
SIX1-205ENST00000555955 GCLCP48506 637 aaPredicted RBP16.17■□□□□ 0.18
SIX1-205ENST00000555955 KIF5AQ12840 1032 aa16.17■□□□□ 0.18
SIX1-205ENST00000555955 CADPS2Q86UW7 1296 aa16.17■□□□□ 0.18
SIX1-205ENST00000555955 OSBPL1AQ9BXW6 950 aa16.17■□□□□ 0.18
SIX1-205ENST00000555955 CTNND2Q9UQB3 1225 aa16.17■□□□□ 0.18
SIX1-205ENST00000555955 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.17■□□□□ 0.18
SIX1-205ENST00000555955 PPP1R3GB7ZBB8 358 aa16.16■□□□□ 0.18
SIX1-205ENST00000555955 GCOM1H8Y6P7 765 aaPredicted RBP16.16■□□□□ 0.18
SIX1-205ENST00000555955 LUC7L3O95232 432 aaKnown RBP16.16■□□□□ 0.18
SIX1-205ENST00000555955 MYZAPP0CAP1 466 aa16.16■□□□□ 0.18
SIX1-205ENST00000555955 CYLC1P35663 651 aaPredicted RBP16.16■□□□□ 0.18
SIX1-205ENST00000555955 PAFAH1B1P43034 410 aa16.16■□□□□ 0.18
SIX1-205ENST00000555955 USP49Q70CQ1 688 aa16.16■□□□□ 0.18
SIX1-205ENST00000555955 MREGQ8N565 214 aa16.16■□□□□ 0.18
SIX1-205ENST00000555955 KBTBD3Q8NAB2 608 aa16.16■□□□□ 0.18
SIX1-205ENST00000555955 SMCR8Q8TEV9 937 aaPredicted RBP16.16■□□□□ 0.18
SIX1-205ENST00000555955 CNKSR1Q969H4 720 aa16.16■□□□□ 0.18
SIX1-205ENST00000555955 CCDC61Q9Y6R9 512 aa16.16■□□□□ 0.18
SIX1-205ENST00000555955 PTPREP23469 700 aa16.16■□□□□ 0.18
SIX1-205ENST00000555955 CYP27A1Q02318 531 aa16.16■□□□□ 0.18
SIX1-205ENST00000555955 GUCY2DQ02846 1103 aa16.16■□□□□ 0.18
SIX1-205ENST00000555955 NFRKBQ6P4R8 1299 aa16.16■□□□□ 0.18
SIX1-205ENST00000555955 MAEAQ7L5Y9 396 aa16.16■□□□□ 0.18
SIX1-205ENST00000555955 DNAJC7Q99615 494 aa16.16■□□□□ 0.18
SIX1-205ENST00000555955 TAF1DQ9H5J8 278 aaPredicted RBP16.16■□□□□ 0.18
SIX1-205ENST00000555955 TMEM165Q9HC07 324 aa16.16■□□□□ 0.18
SIX1-205ENST00000555955 RBM12Q9NTZ6 932 aaKnown RBP16.16■□□□□ 0.18
SIX1-205ENST00000555955 FBXO2Q9UK22 296 aaPredicted RBP16.16■□□□□ 0.18
SIX1-205ENST00000555955 TOPAZ1Q8N9V7 1692 aa16.16■□□□□ 0.18
SIX1-205ENST00000555955 LGR5O75473 907 aa16.15■□□□□ 0.18
SIX1-205ENST00000555955 HAND2P61296 217 aa16.15■□□□□ 0.18
SIX1-205ENST00000555955 RGPD1P0DJD0 1748 aa16.15■□□□□ 0.18
SIX1-205ENST00000555955 TRIM29Q14134 588 aa16.15■□□□□ 0.18
SIX1-205ENST00000555955 PDIA5Q14554 519 aa16.15■□□□□ 0.18
SIX1-205ENST00000555955 ZNF268Q14587 947 aaPredicted RBP16.15■□□□□ 0.18
SIX1-205ENST00000555955 PLPPR3Q6T4P5 718 aa16.15■□□□□ 0.18
SIX1-205ENST00000555955 GALNT15Q8N3T1 639 aa16.15■□□□□ 0.18
SIX1-205ENST00000555955 EYA1Q99502 592 aa16.15■□□□□ 0.18
SIX1-205ENST00000555955 HAUS7Q99871 368 aa16.15■□□□□ 0.18
SIX1-205ENST00000555955 BABAM1Q9NWV8 329 aa16.15■□□□□ 0.18
SIX1-205ENST00000555955 DPPA5A6NC42 116 aa16.14■□□□□ 0.17
SIX1-205ENST00000555955 H7C1W4 665 aa16.14■□□□□ 0.17
SIX1-205ENST00000555955 STXBP3O00186 592 aa16.14■□□□□ 0.17
SIX1-205ENST00000555955 GRM8O00222 908 aa16.14■□□□□ 0.17
SIX1-205ENST00000555955 RNF8O76064 485 aa16.14■□□□□ 0.17
SIX1-205ENST00000555955 HEXIM1O94992 359 aaKnown RBP16.14■□□□□ 0.17
SIX1-205ENST00000555955 SPAG1Q07617 926 aa16.14■□□□□ 0.17
SIX1-205ENST00000555955 MTHFD1LQ6UB35 978 aa16.14■□□□□ 0.17
SIX1-205ENST00000555955 ARHGAP22Q7Z5H3 698 aa16.14■□□□□ 0.17
SIX1-205ENST00000555955 PHKBQ93100 1093 aa16.14■□□□□ 0.17
SIX1-205ENST00000555955 PURBQ96QR8 312 aaKnown RBP16.14■□□□□ 0.17
SIX1-205ENST00000555955 SENP2Q9HC62 589 aa16.14■□□□□ 0.17
SIX1-205ENST00000555955 GDF3Q9NR23 364 aa16.14■□□□□ 0.17
SIX1-205ENST00000555955 HELLSQ9NRZ9 838 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms