RNA–Protein interactions for RNA: ENST00000555929.1

PCNX4-211, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-211ENST00000555929 C12orf42Q96LP6 360 aa8.82□□□□□ -1
PCNX4-211ENST00000555929 ZSCAN31Q96LW9 406 aaPredicted RBP8.82□□□□□ -1
PCNX4-211ENST00000555929 P2RX7Q99572 595 aaKnown RBP8.82□□□□□ -1
PCNX4-211ENST00000555929 SLF1Q9BQI6 1058 aa8.82□□□□□ -1
PCNX4-211ENST00000555929 AGXT2Q9BYV1 514 aa8.82□□□□□ -1
PCNX4-211ENST00000555929 ASCC2Q9H1I8 757 aaPredicted RBP8.82□□□□□ -1
PCNX4-211ENST00000555929 FBXO28Q9NVF7 368 aa8.82□□□□□ -1
PCNX4-211ENST00000555929 MAD2L2Q9UI95 211 aa8.82□□□□□ -1
PCNX4-211ENST00000555929 FEM1BQ9UK73 627 aa8.82□□□□□ -1
PCNX4-211ENST00000555929 SYNPO2Q9UMS6 1093 aa8.82□□□□□ -1
PCNX4-211ENST00000555929 LAMA4Q16363 1823 aa8.82□□□□□ -1
PCNX4-211ENST00000555929 TRPM7Q96QT4 1865 aa8.81□□□□□ -1
PCNX4-211ENST00000555929 CCDC196A0A1B0GTZ2 297 aa8.81□□□□□ -1
PCNX4-211ENST00000555929 PFKFB2O60825 505 aa8.81□□□□□ -1
PCNX4-211ENST00000555929 ZBED4O75132 1171 aa8.81□□□□□ -1
PCNX4-211ENST00000555929 PLEKHA8P1O95397 391 aa8.81□□□□□ -1
PCNX4-211ENST00000555929 LARGE1O95461 756 aa8.81□□□□□ -1
PCNX4-211ENST00000555929 CDC27P30260 824 aa8.81□□□□□ -1
PCNX4-211ENST00000555929 GNAQP50148 359 aa8.81□□□□□ -1
PCNX4-211ENST00000555929 PLS1Q14651 629 aa8.81□□□□□ -1
PCNX4-211ENST00000555929 COG2Q14746 738 aa8.81□□□□□ -1
PCNX4-211ENST00000555929 TAF1CQ15572 869 aaPredicted RBP8.81□□□□□ -1
PCNX4-211ENST00000555929 SYDE2Q5VT97 1194 aa8.81□□□□□ -1
PCNX4-211ENST00000555929 CCDC174Q6PII3 467 aa8.81□□□□□ -1
PCNX4-211ENST00000555929 FAM160B2Q86V87 743 aa8.81□□□□□ -1
PCNX4-211ENST00000555929 HOMER1Q86YM7 354 aa8.81□□□□□ -1
PCNX4-211ENST00000555929 CCDC83Q8IWF9 413 aa8.81□□□□□ -1
PCNX4-211ENST00000555929 FBXL16Q8N461 479 aa8.81□□□□□ -1
PCNX4-211ENST00000555929 ATG4CQ96DT6 458 aa8.81□□□□□ -1
PCNX4-211ENST00000555929 PAGR1Q9BTK6 254 aa8.81□□□□□ -1
PCNX4-211ENST00000555929 RBM28Q9NW13 759 aaKnown RBP8.81□□□□□ -1
PCNX4-211ENST00000555929 HOXC10Q9NYD6 342 aa8.81□□□□□ -1
PCNX4-211ENST00000555929 PNMA3Q9UL41 463 aa8.81□□□□□ -1
PCNX4-211ENST00000555929 HPS5Q9UPZ3 1129 aa8.81□□□□□ -1
PCNX4-211ENST00000555929 DOCK1Q14185 1865 aa8.81□□□□□ -1
PCNX4-211ENST00000555929 hCG_1642624A0A1W2PR95 340 aa8.8□□□□□ -1
PCNX4-211ENST00000555929 TESPA1A2RU30 521 aaPredicted RBP8.8□□□□□ -1
PCNX4-211ENST00000555929 PALM3A6NDB9 673 aaPredicted RBP8.8□□□□□ -1
PCNX4-211ENST00000555929 PEX10O60683 326 aa8.8□□□□□ -1
PCNX4-211ENST00000555929 TRPA1O75762 1119 aa8.8□□□□□ -1
PCNX4-211ENST00000555929 SNHG28P0DPA3 235 aa8.8□□□□□ -1
PCNX4-211ENST00000555929 HOXA7P31268 230 aaPredicted RBP8.8□□□□□ -1
PCNX4-211ENST00000555929 MAP2K2P36507 400 aa8.8□□□□□ -1
PCNX4-211ENST00000555929 TM4SF4P48230 202 aa8.8□□□□□ -1
PCNX4-211ENST00000555929 MCM2P49736 904 aa8.8□□□□□ -1
PCNX4-211ENST00000555929 AKAP17AQ02040 695 aaKnown RBP8.8□□□□□ -1
PCNX4-211ENST00000555929 SCRN1Q12765 414 aa8.8□□□□□ -1
PCNX4-211ENST00000555929 CPLX2Q6PUV4 134 aaKnown RBP8.8□□□□□ -1
PCNX4-211ENST00000555929 NBPF11Q86T75 865 aa8.8□□□□□ -1
PCNX4-211ENST00000555929 ADGRF4Q8IZF3 695 aa8.8□□□□□ -1
PCNX4-211ENST00000555929 CPXCR1Q8N123 301 aa8.8□□□□□ -1
PCNX4-211ENST00000555929 SRBD1Q8N5C6 995 aaKnown RBP8.8□□□□□ -1
PCNX4-211ENST00000555929 PRPF38AQ8NAV1 312 aaKnown RBP8.8□□□□□ -1
PCNX4-211ENST00000555929 SPRYD3Q8NCJ5 442 aa8.8□□□□□ -1
PCNX4-211ENST00000555929 TMX3Q96JJ7 454 aa8.8□□□□□ -1
PCNX4-211ENST00000555929 PARK7Q99497 189 aaKnown RBP8.8□□□□□ -1
PCNX4-211ENST00000555929 MAP3K14Q99558 947 aa8.8□□□□□ -1
PCNX4-211ENST00000555929 LZTS2Q9BRK4 669 aa8.8□□□□□ -1
PCNX4-211ENST00000555929 BEGAINQ9BUH8 593 aa8.8□□□□□ -1
PCNX4-211ENST00000555929 SLC26A6Q9BXS9 759 aa8.8□□□□□ -1
PCNX4-211ENST00000555929 ZFYVE28Q9HCC9 887 aa8.8□□□□□ -1
PCNX4-211ENST00000555929 SH2B1Q9NRF2 756 aaPredicted RBP8.8□□□□□ -1
PCNX4-211ENST00000555929 PPP1R9AQ9ULJ8 1098 aa8.8□□□□□ -1
PCNX4-211ENST00000555929 PRR12Q9ULL5 1215 aa8.8□□□□□ -1
PCNX4-211ENST00000555929 LHX6Q9UPM6 363 aa8.8□□□□□ -1
PCNX4-211ENST00000555929 OTOFQ9HC10 1997 aa8.79□□□□□ -1
PCNX4-211ENST00000555929 SPDYE16A6NNV3 312 aaPredicted RBP8.79□□□□□ -1
PCNX4-211ENST00000555929 TBC1D8O95759 1140 aa8.79□□□□□ -1
PCNX4-211ENST00000555929 ALDH1A1P00352 501 aa8.79□□□□□ -1
PCNX4-211ENST00000555929 HSP90AA1P07900 732 aaKnown RBP8.79□□□□□ -1
PCNX4-211ENST00000555929 EVCP57679 992 aa8.79□□□□□ -1
PCNX4-211ENST00000555929 HERVK_113P62684 666 aa8.79□□□□□ -1
PCNX4-211ENST00000555929 SSRP1Q08945 709 aaKnown RBP8.79□□□□□ -1
PCNX4-211ENST00000555929 WDR78Q5VTH9 848 aa8.79□□□□□ -1
PCNX4-211ENST00000555929 TMTC3Q6ZXV5 915 aa8.79□□□□□ -1
PCNX4-211ENST00000555929 CCAR1Q8IX12 1150 aaKnown RBP8.79□□□□□ -1
PCNX4-211ENST00000555929 ANKRD13CQ8N6S4 541 aa8.79□□□□□ -1
PCNX4-211ENST00000555929 IL27Q8NEV9 243 aa8.79□□□□□ -1
PCNX4-211ENST00000555929 PHKBQ93100 1093 aa8.79□□□□□ -1
PCNX4-211ENST00000555929 GTF3C6Q969F1 213 aa8.79□□□□□ -1
PCNX4-211ENST00000555929 RRP36Q96EU6 259 aaKnown RBP8.79□□□□□ -1
PCNX4-211ENST00000555929 DDX11Q96FC9 970 aa8.79□□□□□ -1
PCNX4-211ENST00000555929 PIGSQ96S52 555 aa8.79□□□□□ -1
PCNX4-211ENST00000555929 JMJD4Q9H9V9 463 aa8.79□□□□□ -1
PCNX4-211ENST00000555929 CWC22Q9HCG8 908 aaKnown RBP8.79□□□□□ -1
PCNX4-211ENST00000555929 RAVER2Q9HCJ3 691 aaKnown RBP8.79□□□□□ -1
PCNX4-211ENST00000555929 TSHZ2Q9NRE2 1034 aa8.79□□□□□ -1
PCNX4-211ENST00000555929 FAM217BQ9NTX9 383 aaPredicted RBP8.79□□□□□ -1
PCNX4-211ENST00000555929 SEC63Q9UGP8 760 aaKnown RBP8.79□□□□□ -1
PCNX4-211ENST00000555929 CPA4Q9UI42 421 aa8.79□□□□□ -1
PCNX4-211ENST00000555929 V9GY48 417 aaPredicted RBP8.79□□□□□ -1
PCNX4-211ENST00000555929 MYH8P13535 1937 aa8.78□□□□□ -1
PCNX4-211ENST00000555929 K7ELQ4 463 aaPredicted RBP8.78□□□□□ -1
PCNX4-211ENST00000555929 VWA5AO00534 786 aa8.78□□□□□ -1
PCNX4-211ENST00000555929 CDKL5O76039 1030 aa8.78□□□□□ -1
PCNX4-211ENST00000555929 ANP32AP39687 249 aaKnown RBP8.78□□□□□ -1
PCNX4-211ENST00000555929 FOSBP53539 338 aa8.78□□□□□ -1
PCNX4-211ENST00000555929 RCAN1P53805 252 aa8.78□□□□□ -1
PCNX4-211ENST00000555929 CRHR2Q13324 411 aa8.78□□□□□ -1
PCNX4-211ENST00000555929 BECN1Q14457 450 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms