RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 MOXD2PA6NHM9 499 aa23.36■■□□□ 1.33
PRKCH-219ENST00000555906 NOVP48745 357 aa23.36■■□□□ 1.33
PRKCH-219ENST00000555906 IKQ13123 557 aaPredicted RBP23.36■■□□□ 1.33
PRKCH-219ENST00000555906 ABHD16BQ9H3Z7 469 aa23.36■■□□□ 1.33
PRKCH-219ENST00000555906 HOMER2Q9NSB8 354 aa23.36■■□□□ 1.33
PRKCH-219ENST00000555906 A0A0D9SFI3 127 aa23.35■■□□□ 1.33
PRKCH-219ENST00000555906 NMT2O60551 498 aa23.35■■□□□ 1.33
PRKCH-219ENST00000555906 DUSP11O75319 330 aaKnown RBP23.35■■□□□ 1.33
PRKCH-219ENST00000555906 CLTBP09497 229 aa23.35■■□□□ 1.33
PRKCH-219ENST00000555906 FGRP09769 529 aa23.35■■□□□ 1.33
PRKCH-219ENST00000555906 MCCP23508 829 aa23.35■■□□□ 1.33
PRKCH-219ENST00000555906 CST5P28325 142 aaPredicted RBP23.35■■□□□ 1.33
PRKCH-219ENST00000555906 ACLYP53396 1101 aa23.35■■□□□ 1.33
PRKCH-219ENST00000555906 TLE2Q04725 743 aa23.35■■□□□ 1.33
PRKCH-219ENST00000555906 ACVR2BQ13705 512 aa23.35■■□□□ 1.33
PRKCH-219ENST00000555906 TKFCQ3LXA3 575 aa23.35■■□□□ 1.33
PRKCH-219ENST00000555906 ARMCX2Q7L311 632 aa23.35■■□□□ 1.33
PRKCH-219ENST00000555906 KLHDC9Q8NEP7 349 aa23.35■■□□□ 1.33
PRKCH-219ENST00000555906 RNF146Q9NTX7 359 aa23.35■■□□□ 1.33
PRKCH-219ENST00000555906 MTMR10Q9NXD2 777 aa23.35■■□□□ 1.33
PRKCH-219ENST00000555906 TACC3Q9Y6A5 838 aa23.35■■□□□ 1.33
PRKCH-219ENST00000555906 TRIM43BA6NCK2 446 aa23.34■■□□□ 1.33
PRKCH-219ENST00000555906 RANBP6O60518 1105 aaKnown RBP23.34■■□□□ 1.33
PRKCH-219ENST00000555906 MCMDC2Q4G0Z9 681 aa23.34■■□□□ 1.33
PRKCH-219ENST00000555906 SH3RF1Q7Z6J0 888 aa23.34■■□□□ 1.33
PRKCH-219ENST00000555906 FAM133AQ8N9E0 248 aa23.34■■□□□ 1.33
PRKCH-219ENST00000555906 NUP133Q8WUM0 1156 aa23.34■■□□□ 1.33
PRKCH-219ENST00000555906 BADQ92934 168 aa23.34■■□□□ 1.33
PRKCH-219ENST00000555906 TRIM43Q96BQ3 446 aaPredicted RBP23.34■■□□□ 1.33
PRKCH-219ENST00000555906 FAM227BQ96M60 508 aa23.34■■□□□ 1.33
PRKCH-219ENST00000555906 A1CFQ9NQ94 594 aaKnown RBP23.34■■□□□ 1.33
PRKCH-219ENST00000555906 INCENPQ9NQS7 918 aa23.34■■□□□ 1.33
PRKCH-219ENST00000555906 STXBP5LQ9Y2K9 1186 aa23.34■■□□□ 1.33
PRKCH-219ENST00000555906 FAM109BQ6ICB4 259 aaPredicted RBP23.33■■□□□ 1.33
PRKCH-219ENST00000555906 CCSAPQ6IQ19 270 aaPredicted RBP23.33■■□□□ 1.33
PRKCH-219ENST00000555906 RCSD1Q6JBY9 416 aa23.33■■□□□ 1.33
PRKCH-219ENST00000555906 KCTD1Q719H9 257 aa23.33■■□□□ 1.33
PRKCH-219ENST00000555906 RASGRP2Q7LDG7 609 aa23.33■■□□□ 1.33
PRKCH-219ENST00000555906 DCAF4Q8WV16 495 aa23.33■■□□□ 1.33
PRKCH-219ENST00000555906 KATNBL1Q9H079 304 aa23.33■■□□□ 1.33
PRKCH-219ENST00000555906 UPF3AQ9H1J1 476 aaKnown RBP23.33■■□□□ 1.33
PRKCH-219ENST00000555906 STARD7Q9NQZ5 370 aa23.33■■□□□ 1.33
PRKCH-219ENST00000555906 POTEB2H3BUK9 544 aa23.32■■□□□ 1.32
PRKCH-219ENST00000555906 ADCY6O43306 1168 aa23.32■■□□□ 1.32
PRKCH-219ENST00000555906 PQBP1O60828 265 aaKnown RBP23.32■■□□□ 1.32
PRKCH-219ENST00000555906 CCDC144BQ3MJ40 725 aa23.32■■□□□ 1.32
PRKCH-219ENST00000555906 ANKRD33Q7Z3H0 272 aa23.32■■□□□ 1.32
PRKCH-219ENST00000555906 CCDC144CPQ8IYA2 1237 aa23.32■■□□□ 1.32
PRKCH-219ENST00000555906 AGBL1Q96MI9 1066 aa23.32■■□□□ 1.32
PRKCH-219ENST00000555906 LNPKQ9C0E8 428 aa23.32■■□□□ 1.32
PRKCH-219ENST00000555906 PRR12Q9ULL5 1215 aa23.32■■□□□ 1.32
PRKCH-219ENST00000555906 MYADML2A6NDP7 307 aa23.31■■□□□ 1.32
PRKCH-219ENST00000555906 KIAA0355O15063 1070 aa23.31■■□□□ 1.32
PRKCH-219ENST00000555906 FGAP02671 866 aa23.31■■□□□ 1.32
PRKCH-219ENST00000555906 HSPD1P10809 573 aaKnown RBP23.31■■□□□ 1.32
PRKCH-219ENST00000555906 CNTN2Q02246 1040 aa23.31■■□□□ 1.32
PRKCH-219ENST00000555906 ZNF589Q86UQ0 364 aaPredicted RBP23.31■■□□□ 1.32
PRKCH-219ENST00000555906 SMC5Q8IY18 1101 aa23.31■■□□□ 1.32
PRKCH-219ENST00000555906 TOX2Q96NM4 488 aa23.31■■□□□ 1.32
PRKCH-219ENST00000555906 SPC25Q9HBM1 224 aa23.31■■□□□ 1.32
PRKCH-219ENST00000555906 CCDC171Q6TFL3 1326 aa23.31■■□□□ 1.32
PRKCH-219ENST00000555906 C6orf222P0C671 652 aaPredicted RBP23.3■■□□□ 1.32
PRKCH-219ENST00000555906 ALAS1P13196 640 aa23.3■■□□□ 1.32
PRKCH-219ENST00000555906 GJA9P57773 515 aa23.3■■□□□ 1.32
PRKCH-219ENST00000555906 NMIQ13287 307 aaPredicted RBP23.3■■□□□ 1.32
PRKCH-219ENST00000555906 SHHQ15465 462 aa23.3■■□□□ 1.32
PRKCH-219ENST00000555906 KCNA10Q16322 511 aa23.3■■□□□ 1.32
PRKCH-219ENST00000555906 CCDC96Q2M329 555 aa23.3■■□□□ 1.32
PRKCH-219ENST00000555906 C9orf50Q5SZB4 431 aa23.3■■□□□ 1.32
PRKCH-219ENST00000555906 PCSK9Q8NBP7 692 aaKnown RBP23.3■■□□□ 1.32
PRKCH-219ENST00000555906 CHMP4CQ96CF2 233 aa23.3■■□□□ 1.32
PRKCH-219ENST00000555906 TRERF1Q96PN7 1200 aa23.3■■□□□ 1.32
PRKCH-219ENST00000555906 ELP1O95163 1332 aa23.3■■□□□ 1.32
PRKCH-219ENST00000555906 PCP11498 1178 aaKnown RBP23.29■■□□□ 1.32
PRKCH-219ENST00000555906 CCDC174Q6PII3 467 aa23.29■■□□□ 1.32
PRKCH-219ENST00000555906 SLC17A8Q8NDX2 589 aa23.29■■□□□ 1.32
PRKCH-219ENST00000555906 GLT1D1Q96MS3 346 aa23.29■■□□□ 1.32
PRKCH-219ENST00000555906 RANBP17Q9H2T7 1088 aaKnown RBP23.29■■□□□ 1.32
PRKCH-219ENST00000555906 TOMM22Q9NS69 142 aa23.29■■□□□ 1.32
PRKCH-219ENST00000555906 TCP11L1Q9NUJ3 509 aa23.29■■□□□ 1.32
PRKCH-219ENST00000555906 MROH7Q68CQ1 1323 aa23.29■■□□□ 1.32
PRKCH-219ENST00000555906 ASB14A6NK59 587 aa23.28■■□□□ 1.32
PRKCH-219ENST00000555906 TRIM6-TRIM34B2RNG4 842 aa23.28■■□□□ 1.32
PRKCH-219ENST00000555906 ICAM1P05362 532 aa23.28■■□□□ 1.32
PRKCH-219ENST00000555906 TOP1P11387 765 aaKnown RBP23.28■■□□□ 1.32
PRKCH-219ENST00000555906 ITGB8P26012 769 aa23.28■■□□□ 1.32
PRKCH-219ENST00000555906 NKX3-2P78367 333 aa23.28■■□□□ 1.32
PRKCH-219ENST00000555906 BTNL9Q6UXG8 535 aa23.28■■□□□ 1.32
PRKCH-219ENST00000555906 CCPG1Q9ULG6 757 aa23.28■■□□□ 1.32
PRKCH-219ENST00000555906 CDH23Q9H251 3354 aa23.28■■□□□ 1.32
PRKCH-219ENST00000555906 SOWAHBA6NEL2 793 aa23.27■■□□□ 1.32
PRKCH-219ENST00000555906 DCDC2CA8MYV0 355 aa23.27■■□□□ 1.32
PRKCH-219ENST00000555906 ASGR1P07306 291 aa23.27■■□□□ 1.32
PRKCH-219ENST00000555906 RAG1P15918 1043 aa23.27■■□□□ 1.32
PRKCH-219ENST00000555906 FAAP100Q0VG06 881 aa23.27■■□□□ 1.32
PRKCH-219ENST00000555906 MUM1L1Q5H9M0 696 aa23.27■■□□□ 1.32
PRKCH-219ENST00000555906 RRP12Q5JTH9 1297 aaKnown RBP23.27■■□□□ 1.32
PRKCH-219ENST00000555906 RWDD1Q9H446 243 aaPredicted RBP23.27■■□□□ 1.32
PRKCH-219ENST00000555906 TMEM39AQ9NV64 488 aa23.27■■□□□ 1.32
PRKCH-219ENST00000555906 CYP39A1Q9NYL5 469 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms