RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 POU5F1Q01860 360 aaKnown RBP11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 ACTN3Q08043 901 aaPredicted RBP11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 COL19A1Q14993 1142 aa11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 RCN1Q15293 331 aa11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 CLPPQ16740 277 aaPredicted RBP11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 NCAPH2Q6IBW4 605 aa11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 RCSD1Q6JBY9 416 aa11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 WDR93Q6P2C0 686 aa11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 SLC30A9Q6PML9 568 aa11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 SMYD1Q8NB12 490 aa11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 CUL5Q93034 780 aa11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 CDC5LQ99459 802 aaKnown RBP11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 ADGRG1Q9Y653 693 aa11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 CRB1P82279 1406 aa11.49□□□□□ -0.57
EFCAB11-208ENST00000555872 CCDC194A0A1B0GVG4 234 aa11.49□□□□□ -0.57
EFCAB11-208ENST00000555872 EIF3HO15372 352 aaKnown RBP eCLIP11.49□□□□□ -0.57
EFCAB11-208ENST00000555872 SCG2P13521 617 aa11.49□□□□□ -0.57
EFCAB11-208ENST00000555872 CCDC92Q53HC0 331 aaPredicted RBP11.49□□□□□ -0.57
EFCAB11-208ENST00000555872 NANOGNBQ7Z5D8 188 aa11.49□□□□□ -0.57
EFCAB11-208ENST00000555872 CCDC148Q8NFR7 591 aa11.49□□□□□ -0.57
EFCAB11-208ENST00000555872 CTNNBL1Q8WYA6 563 aaPredicted RBP11.49□□□□□ -0.57
EFCAB11-208ENST00000555872 RSRC1Q96IZ7 334 aaKnown RBP11.49□□□□□ -0.57
EFCAB11-208ENST00000555872 FSD1Q9BTV5 496 aa11.49□□□□□ -0.57
EFCAB11-208ENST00000555872 MUC3BQ9H195 1237 aa11.49□□□□□ -0.57
EFCAB11-208ENST00000555872 MYO6Q9UM54 1294 aa11.49□□□□□ -0.57
EFCAB11-208ENST00000555872 LSM1O15116 133 aaKnown RBP11.49□□□□□ -0.57
EFCAB11-208ENST00000555872 SLC26A4O43511 780 aa11.49□□□□□ -0.57
EFCAB11-208ENST00000555872 CSPG5O95196 566 aa11.49□□□□□ -0.57
EFCAB11-208ENST00000555872 ALOX15P16050 662 aaPredicted RBP11.49□□□□□ -0.57
EFCAB11-208ENST00000555872 PFKFB1P16118 471 aa11.49□□□□□ -0.57
EFCAB11-208ENST00000555872 PPFIA1Q13136 1202 aa11.49□□□□□ -0.57
EFCAB11-208ENST00000555872 TBC1D10BQ4KMP7 808 aaPredicted RBP11.49□□□□□ -0.57
EFCAB11-208ENST00000555872 GJC2Q5T442 439 aaPredicted RBP11.49□□□□□ -0.57
EFCAB11-208ENST00000555872 TLDC1Q6P9B6 456 aa11.49□□□□□ -0.57
EFCAB11-208ENST00000555872 RAD9BQ6WBX8 426 aa11.49□□□□□ -0.57
EFCAB11-208ENST00000555872 COG1Q8WTW3 980 aa11.49□□□□□ -0.57
EFCAB11-208ENST00000555872 GIMAP1Q8WWP7 306 aa11.49□□□□□ -0.57
EFCAB11-208ENST00000555872 DDX17Q92841 729 aaKnown RBP11.49□□□□□ -0.57
EFCAB11-208ENST00000555872 RUFY1Q96T51 708 aa11.49□□□□□ -0.57
EFCAB11-208ENST00000555872 INO80BQ9C086 356 aaPredicted RBP11.49□□□□□ -0.57
EFCAB11-208ENST00000555872 NCOA5Q9HCD5 579 aaKnown RBP11.49□□□□□ -0.57
EFCAB11-208ENST00000555872 JADE2Q9NQC1 790 aa11.49□□□□□ -0.57
EFCAB11-208ENST00000555872 HMG20BQ9P0W2 317 aa11.49□□□□□ -0.57
EFCAB11-208ENST00000555872 TMEM221A6NGB7 291 aa11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 HIP1O00291 1037 aa11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 SPTLC2O15270 562 aa11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 ZMYND10O75800 440 aa11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 TRIM37O94972 964 aa11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 TRIM21P19474 475 aaKnown RBP11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 FUT4P22083 530 aa11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 PNOCQ13519 176 aa11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 TUBB2AQ13885 445 aa11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 OTUD7BQ6GQQ9 843 aa11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 OLFM4Q6UX06 510 aa11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 CEP57Q86XR8 500 aa11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 XAGE2Q96GT9 111 aa11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 LLPHQ9BRT6 129 aaKnown RBP11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 TUBB2BQ9BVA1 445 aa11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 SSUH2Q9Y2M2 353 aa11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 GRIN2DO15399 1336 aa11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 AGPSO00116 658 aa11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 NDUFAB1O14561 156 aa11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 EVA1CP58658 441 aa11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 PABPC4Q13310 644 aaKnown RBP eCLIP11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 WHAMMP3Q1A5X7 153 aa11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 GNPTABQ3T906 1256 aa11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 KANK3Q6NY19 840 aa11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 AACSQ86V21 672 aa11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 GSPT2Q8IYD1 628 aaKnown RBP11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 KCNG4Q8TDN1 519 aa11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 CPLX3Q8WVH0 158 aa11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 MPP4Q96JB8 637 aa11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 RPAP3Q9H6T3 665 aaPredicted RBP11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 AASDHPPTQ9NRN7 309 aa11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 KLC4Q9NSK0 619 aa11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 IP6K2Q9UHH9 426 aa11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 WDR37Q9Y2I8 494 aa11.48□□□□□ -0.57
EFCAB11-208ENST00000555872 FSBPO95073 299 aa11.47□□□□□ -0.57
EFCAB11-208ENST00000555872 KRT32Q14532 448 aa11.47□□□□□ -0.57
EFCAB11-208ENST00000555872 LONRF1Q17RB8 773 aa11.47□□□□□ -0.57
EFCAB11-208ENST00000555872 COBLL1Q53SF7 1204 aa11.47□□□□□ -0.57
EFCAB11-208ENST00000555872 ERMNQ8TAM6 284 aa11.47□□□□□ -0.57
EFCAB11-208ENST00000555872 NAPGQ99747 312 aaPredicted RBP11.47□□□□□ -0.57
EFCAB11-208ENST00000555872 COMMD8Q9NX08 183 aa11.47□□□□□ -0.57
EFCAB11-208ENST00000555872 MEFVO15553 781 aaPredicted RBP11.47□□□□□ -0.57
EFCAB11-208ENST00000555872 SLC8A3P57103 927 aa11.47□□□□□ -0.57
EFCAB11-208ENST00000555872 CEP85LQ5SZL2 805 aa11.47□□□□□ -0.57
EFCAB11-208ENST00000555872 RC3H1Q5TC82 1133 aaKnown RBP11.47□□□□□ -0.57
EFCAB11-208ENST00000555872 BOLA2Q9H3K6 86 aa11.47□□□□□ -0.57
EFCAB11-208ENST00000555872 ZMAT5Q9UDW3 170 aaKnown RBP11.47□□□□□ -0.57
EFCAB11-208ENST00000555872 TUBGCP4Q9UGJ1 667 aa11.47□□□□□ -0.57
EFCAB11-208ENST00000555872 ATICP31939 592 aa11.46□□□□□ -0.57
EFCAB11-208ENST00000555872 B4GALNT4Q76KP1 1039 aa11.46□□□□□ -0.57
EFCAB11-208ENST00000555872 DCLK2Q8N568 766 aa11.46□□□□□ -0.57
EFCAB11-208ENST00000555872 CCDC68Q9H2F9 335 aa11.46□□□□□ -0.57
EFCAB11-208ENST00000555872 PHAXQ9H814 394 aaKnown RBP11.46□□□□□ -0.57
EFCAB11-208ENST00000555872 HELLSQ9NRZ9 838 aa11.46□□□□□ -0.57
EFCAB11-208ENST00000555872 TUBE1Q9UJT0 475 aa11.46□□□□□ -0.57
EFCAB11-208ENST00000555872 PA2G4Q9UQ80 394 aaKnown RBP11.46□□□□□ -0.57
EFCAB11-208ENST00000555872 AKR1B15C9JRZ8 316 aaPredicted RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms