RNA–Protein interactions for RNA: ENST00000555854.1

VIPAS39-207, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-207ENST00000555854 RANBP6O60518 1105 aaKnown RBP11.02□□□□□ -0.65
VIPAS39-207ENST00000555854 SNAI1O95863 264 aaPredicted RBP11.02□□□□□ -0.65
VIPAS39-207ENST00000555854 SLC1A4P43007 532 aa11.02□□□□□ -0.65
VIPAS39-207ENST00000555854 STAT2P52630 851 aa11.02□□□□□ -0.65
VIPAS39-207ENST00000555854 ATN1P54259 1190 aaPredicted RBP11.02□□□□□ -0.65
VIPAS39-207ENST00000555854 OAZ1P54368 228 aa11.02□□□□□ -0.65
VIPAS39-207ENST00000555854 SNAP25P60880 206 aa11.02□□□□□ -0.65
VIPAS39-207ENST00000555854 SNX17Q15036 470 aa11.02□□□□□ -0.65
VIPAS39-207ENST00000555854 LRRC41Q15345 812 aa11.02□□□□□ -0.65
VIPAS39-207ENST00000555854 KCTD1Q719H9 257 aa11.02□□□□□ -0.65
VIPAS39-207ENST00000555854 STAG1Q8WVM7 1258 aa11.02□□□□□ -0.65
VIPAS39-207ENST00000555854 AGBL1Q96MI9 1066 aa11.02□□□□□ -0.65
VIPAS39-207ENST00000555854 SENP6Q9GZR1 1112 aaPredicted RBP11.02□□□□□ -0.65
VIPAS39-207ENST00000555854 KATNBL1Q9H079 304 aa11.02□□□□□ -0.65
VIPAS39-207ENST00000555854 DDX49Q9Y6V7 483 aaKnown RBP11.02□□□□□ -0.65
VIPAS39-207ENST00000555854 PLA2G6O60733 806 aa11.01□□□□□ -0.65
VIPAS39-207ENST00000555854 ZBED4O75132 1171 aa11.01□□□□□ -0.65
VIPAS39-207ENST00000555854 ADAMTS4O75173 837 aa11.01□□□□□ -0.65
VIPAS39-207ENST00000555854 IRX5P78411 483 aaPredicted RBP11.01□□□□□ -0.65
VIPAS39-207ENST00000555854 TTBK2Q6IQ55 1244 aa11.01□□□□□ -0.65
VIPAS39-207ENST00000555854 MAMDC4Q6UXC1 1216 aa11.01□□□□□ -0.65
VIPAS39-207ENST00000555854 TMEM47Q9BQJ4 181 aa11.01□□□□□ -0.65
VIPAS39-207ENST00000555854 A1CFQ9NQ94 594 aaKnown RBP11.01□□□□□ -0.65
VIPAS39-207ENST00000555854 HOMER2Q9NSB8 354 aa11.01□□□□□ -0.65
VIPAS39-207ENST00000555854 SLC5A4Q9NY91 659 aa11.01□□□□□ -0.65
VIPAS39-207ENST00000555854 NRBP1Q9UHY1 535 aa11.01□□□□□ -0.65
VIPAS39-207ENST00000555854 PRR12Q9ULL5 1215 aa11.01□□□□□ -0.65
VIPAS39-207ENST00000555854 SYNGAP1Q96PV0 1343 aa11.01□□□□□ -0.65
VIPAS39-207ENST00000555854 A0A1W2PPC1 479 aa11□□□□□ -0.65
VIPAS39-207ENST00000555854 MYADML2A6NDP7 307 aa11□□□□□ -0.65
VIPAS39-207ENST00000555854 PGK1P00558 417 aa11□□□□□ -0.65
VIPAS39-207ENST00000555854 BMP8BP34820 402 aa11□□□□□ -0.65
VIPAS39-207ENST00000555854 SLC4A3P48751 1232 aa11□□□□□ -0.65
VIPAS39-207ENST00000555854 RTP1P59025 263 aa11□□□□□ -0.65
VIPAS39-207ENST00000555854 CNTN2Q02246 1040 aa11□□□□□ -0.65
VIPAS39-207ENST00000555854 MUM1L1Q5H9M0 696 aa11□□□□□ -0.65
VIPAS39-207ENST00000555854 RRP12Q5JTH9 1297 aaKnown RBP11□□□□□ -0.65
VIPAS39-207ENST00000555854 AKNAD1Q5T1N1 836 aa11□□□□□ -0.65
VIPAS39-207ENST00000555854 CWC27Q6UX04 472 aaKnown RBP11□□□□□ -0.65
VIPAS39-207ENST00000555854 ZNF467Q7Z7K2 595 aaPredicted RBP11□□□□□ -0.65
VIPAS39-207ENST00000555854 FAM160B2Q86V87 743 aa11□□□□□ -0.65
VIPAS39-207ENST00000555854 FAM133AQ8N9E0 248 aa11□□□□□ -0.65
VIPAS39-207ENST00000555854 LRCH3Q96II8 777 aa11□□□□□ -0.65
VIPAS39-207ENST00000555854 RNF146Q9NTX7 359 aa11□□□□□ -0.65
VIPAS39-207ENST00000555854 TCP11L1Q9NUJ3 509 aa11□□□□□ -0.65
VIPAS39-207ENST00000555854 MTMR7Q9Y216 660 aa11□□□□□ -0.65
VIPAS39-207ENST00000555854 SYNRGQ9UMZ2 1314 aa11□□□□□ -0.65
VIPAS39-207ENST00000555854 SOWAHBA6NEL2 793 aa10.99□□□□□ -0.65
VIPAS39-207ENST00000555854 SNHG28P0DPA3 235 aa10.99□□□□□ -0.65
VIPAS39-207ENST00000555854 PDHBP11177 359 aa10.99□□□□□ -0.65
VIPAS39-207ENST00000555854 AKR1A1P14550 325 aa10.99□□□□□ -0.65
VIPAS39-207ENST00000555854 PTGS1P23219 599 aa10.99□□□□□ -0.65
VIPAS39-207ENST00000555854 SLC16A2P36021 539 aa10.99□□□□□ -0.65
VIPAS39-207ENST00000555854 TRIM60Q495X7 471 aa10.99□□□□□ -0.65
VIPAS39-207ENST00000555854 TTC22Q5TAA0 569 aa10.99□□□□□ -0.65
VIPAS39-207ENST00000555854 CCSAPQ6IQ19 270 aaPredicted RBP10.99□□□□□ -0.65
VIPAS39-207ENST00000555854 CCDC174Q6PII3 467 aa10.99□□□□□ -0.65
VIPAS39-207ENST00000555854 BTNL9Q6UXG8 535 aa10.99□□□□□ -0.65
VIPAS39-207ENST00000555854 ARMCX2Q7L311 632 aa10.99□□□□□ -0.65
VIPAS39-207ENST00000555854 MSL3Q8N5Y2 521 aaKnown RBP10.99□□□□□ -0.65
VIPAS39-207ENST00000555854 CHST13Q8NET6 341 aa10.99□□□□□ -0.65
VIPAS39-207ENST00000555854 DCAF4Q8WV16 495 aa10.99□□□□□ -0.65
VIPAS39-207ENST00000555854 PURBQ96QR8 312 aaKnown RBP10.99□□□□□ -0.65
VIPAS39-207ENST00000555854 RANBP17Q9H2T7 1088 aaKnown RBP10.99□□□□□ -0.65
VIPAS39-207ENST00000555854 ACAD9Q9H845 621 aa10.99□□□□□ -0.65
VIPAS39-207ENST00000555854 XPNPEP3Q9NQH7 507 aa10.99□□□□□ -0.65
VIPAS39-207ENST00000555854 TOMM22Q9NS69 142 aa10.99□□□□□ -0.65
VIPAS39-207ENST00000555854 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.99□□□□□ -0.65
VIPAS39-207ENST00000555854 ZHX1Q9UKY1 873 aaPredicted RBP10.99□□□□□ -0.65
VIPAS39-207ENST00000555854 ISY1Q9ULR0 285 aaKnown RBP10.99□□□□□ -0.65
VIPAS39-207ENST00000555854 PHF24Q9UPV7 400 aa10.99□□□□□ -0.65
VIPAS39-207ENST00000555854 FRMPD2Q68DX3 1309 aaPredicted RBP10.99□□□□□ -0.65
VIPAS39-207ENST00000555854 KBTBD13C9JR72 458 aa10.98□□□□□ -0.65
VIPAS39-207ENST00000555854 RARBP10826 455 aa10.98□□□□□ -0.65
VIPAS39-207ENST00000555854 TOP1P11387 765 aaKnown RBP10.98□□□□□ -0.65
VIPAS39-207ENST00000555854 ADCYAP1R1P41586 468 aa10.98□□□□□ -0.65
VIPAS39-207ENST00000555854 MDM2Q00987 491 aaPredicted RBP10.98□□□□□ -0.65
VIPAS39-207ENST00000555854 CCDC96Q2M329 555 aa10.98□□□□□ -0.65
VIPAS39-207ENST00000555854 PPP4R3BQ5MIZ7 849 aa10.98□□□□□ -0.65
VIPAS39-207ENST00000555854 SLC39A5Q6ZMH5 540 aa10.98□□□□□ -0.65
VIPAS39-207ENST00000555854 ANKRD35Q8N283 1001 aa10.98□□□□□ -0.65
VIPAS39-207ENST00000555854 ARRDC4Q8NCT1 418 aa10.98□□□□□ -0.65
VIPAS39-207ENST00000555854 CHURC1Q8WUH1 139 aa10.98□□□□□ -0.65
VIPAS39-207ENST00000555854 FERMT2Q96AC1 680 aa10.98□□□□□ -0.65
VIPAS39-207ENST00000555854 DDX11Q96FC9 970 aa10.98□□□□□ -0.65
VIPAS39-207ENST00000555854 ZKSCAN3Q9BRR0 538 aa10.98□□□□□ -0.65
VIPAS39-207ENST00000555854 PDLIM7Q9NR12 457 aa10.98□□□□□ -0.65
VIPAS39-207ENST00000555854 DIAPH3Q9NSV4 1193 aa10.98□□□□□ -0.65
VIPAS39-207ENST00000555854 FBXO40Q9UH90 709 aa10.98□□□□□ -0.65
VIPAS39-207ENST00000555854 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.97□□□□□ -0.65
VIPAS39-207ENST00000555854 A0A1W2PQ45 241 aaPredicted RBP10.97□□□□□ -0.65
VIPAS39-207ENST00000555854 A0A1W2PQY0 241 aa10.97□□□□□ -0.65
VIPAS39-207ENST00000555854 CTAGE5O15320 804 aa10.97□□□□□ -0.65
VIPAS39-207ENST00000555854 FDX1P10109 184 aa10.97□□□□□ -0.65
VIPAS39-207ENST00000555854 PCP11498 1178 aaKnown RBP10.97□□□□□ -0.65
VIPAS39-207ENST00000555854 ALAS1P13196 640 aa10.97□□□□□ -0.65
VIPAS39-207ENST00000555854 ZNF543Q08ER8 600 aa10.97□□□□□ -0.65
VIPAS39-207ENST00000555854 IKQ13123 557 aaPredicted RBP10.97□□□□□ -0.65
VIPAS39-207ENST00000555854 SYDE2Q5VT97 1194 aa10.97□□□□□ -0.65
VIPAS39-207ENST00000555854 C1orf53Q5VUE5 145 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms