RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 THEGQ9P2T0 379 aa13.7□□□□□ -0.22
MTHFD1-211ENST00000555709 PRKAG2Q9UGJ0 569 aa13.7□□□□□ -0.22
MTHFD1-211ENST00000555709 PNMA3Q9UL41 463 aa13.7□□□□□ -0.22
MTHFD1-211ENST00000555709 LIMCH1Q9UPQ0 1083 aa13.7□□□□□ -0.22
MTHFD1-211ENST00000555709 LOC285556D6RIA3 1793 aa13.7□□□□□ -0.22
MTHFD1-211ENST00000555709 RLFQ13129 1914 aa13.69□□□□□ -0.22
MTHFD1-211ENST00000555709 KLF18A0A0U1RQI7 1052 aa13.69□□□□□ -0.22
MTHFD1-211ENST00000555709 TRIM75PA6NK02 468 aa13.69□□□□□ -0.22
MTHFD1-211ENST00000555709 K7ELQ4 463 aaPredicted RBP13.69□□□□□ -0.22
MTHFD1-211ENST00000555709 TTLL1O95922 423 aa13.69□□□□□ -0.22
MTHFD1-211ENST00000555709 ATN1P54259 1190 aaPredicted RBP13.69□□□□□ -0.22
MTHFD1-211ENST00000555709 ST3GAL1Q11201 340 aa13.69□□□□□ -0.22
MTHFD1-211ENST00000555709 PPP4R3BQ5MIZ7 849 aa13.69□□□□□ -0.22
MTHFD1-211ENST00000555709 SIAH1Q8IUQ4 282 aa13.69□□□□□ -0.22
MTHFD1-211ENST00000555709 HSCBQ8IWL3 235 aa13.69□□□□□ -0.22
MTHFD1-211ENST00000555709 TMTC2Q8N394 836 aa13.69□□□□□ -0.22
MTHFD1-211ENST00000555709 USP6NLQ92738 828 aa13.69□□□□□ -0.22
MTHFD1-211ENST00000555709 BADQ92934 168 aa13.69□□□□□ -0.22
MTHFD1-211ENST00000555709 TMEM47Q9BQJ4 181 aa13.69□□□□□ -0.22
MTHFD1-211ENST00000555709 LRFN3Q9BTN0 628 aa13.69□□□□□ -0.22
MTHFD1-211ENST00000555709 NYAP2Q9P242 653 aa13.69□□□□□ -0.22
MTHFD1-211ENST00000555709 MORF4L1Q9UBU8 362 aa13.69□□□□□ -0.22
MTHFD1-211ENST00000555709 STX8Q9UNK0 236 aa13.69□□□□□ -0.22
MTHFD1-211ENST00000555709 GOLGA8BA8MQT2 603 aa13.68□□□□□ -0.22
MTHFD1-211ENST00000555709 TOP1P11387 765 aaKnown RBP13.68□□□□□ -0.22
MTHFD1-211ENST00000555709 EEF2P13639 858 aaKnown RBP13.68□□□□□ -0.22
MTHFD1-211ENST00000555709 RCAN1P53805 252 aa13.68□□□□□ -0.22
MTHFD1-211ENST00000555709 MRPS5P82675 430 aaKnown RBP13.68□□□□□ -0.22
MTHFD1-211ENST00000555709 RAB3GAP1Q15042 981 aa13.68□□□□□ -0.22
MTHFD1-211ENST00000555709 ME3Q16798 604 aa13.68□□□□□ -0.22
MTHFD1-211ENST00000555709 NFXL1Q6ZNB6 911 aa13.68□□□□□ -0.22
MTHFD1-211ENST00000555709 CCDC84Q86UT8 332 aaPredicted RBP13.68□□□□□ -0.22
MTHFD1-211ENST00000555709 ZNF654Q8IZM8 581 aa13.68□□□□□ -0.22
MTHFD1-211ENST00000555709 MKL1Q969V6 931 aa13.68□□□□□ -0.22
MTHFD1-211ENST00000555709 ZNF274Q96GC6 653 aaPredicted RBP13.68□□□□□ -0.22
MTHFD1-211ENST00000555709 TMX3Q96JJ7 454 aa13.68□□□□□ -0.22
MTHFD1-211ENST00000555709 SYNPO2Q9UMS6 1093 aa13.68□□□□□ -0.22
MTHFD1-211ENST00000555709 HCN4Q9Y3Q4 1203 aa13.68□□□□□ -0.22
MTHFD1-211ENST00000555709 A0A1W2PRG0 241 aa13.67□□□□□ -0.22
MTHFD1-211ENST00000555709 CCDC69A6NI79 296 aa13.67□□□□□ -0.22
MTHFD1-211ENST00000555709 PFKFB2O60825 505 aa13.67□□□□□ -0.22
MTHFD1-211ENST00000555709 DDAH1O94760 285 aa13.67□□□□□ -0.22
MTHFD1-211ENST00000555709 PDIA3P30101 505 aaKnown RBP13.67□□□□□ -0.22
MTHFD1-211ENST00000555709 TROAPQ12815 778 aa13.67□□□□□ -0.22
MTHFD1-211ENST00000555709 CCL14Q16627 93 aa13.67□□□□□ -0.22
MTHFD1-211ENST00000555709 POTEEQ6S8J3 1075 aa13.67□□□□□ -0.22
MTHFD1-211ENST00000555709 TRMT44Q8IYL2 757 aaKnown RBP13.67□□□□□ -0.22
MTHFD1-211ENST00000555709 LRRC47Q8N1G4 583 aaKnown RBP13.67□□□□□ -0.22
MTHFD1-211ENST00000555709 PROCA1Q8NCQ7 364 aaPredicted RBP13.67□□□□□ -0.22
MTHFD1-211ENST00000555709 PNMA1Q8ND90 353 aa13.67□□□□□ -0.22
MTHFD1-211ENST00000555709 SOCS4Q8WXH5 440 aa13.67□□□□□ -0.22
MTHFD1-211ENST00000555709 GTF3C6Q969F1 213 aa13.67□□□□□ -0.22
MTHFD1-211ENST00000555709 ZSCAN31Q96LW9 406 aaPredicted RBP13.67□□□□□ -0.22
MTHFD1-211ENST00000555709 NECAB3Q96P71 396 aaPredicted RBP13.67□□□□□ -0.22
MTHFD1-211ENST00000555709 NUDT12Q9BQG2 462 aa13.67□□□□□ -0.22
MTHFD1-211ENST00000555709 KAT14Q9H8E8 782 aa13.67□□□□□ -0.22
MTHFD1-211ENST00000555709 SH2B1Q9NRF2 756 aaPredicted RBP13.67□□□□□ -0.22
MTHFD1-211ENST00000555709 SLC12A7Q9Y666 1083 aa13.67□□□□□ -0.22
MTHFD1-211ENST00000555709 CHD9Q3L8U1 2897 aa13.67□□□□□ -0.22
MTHFD1-211ENST00000555709 ZBTB43O43298 467 aa13.66□□□□□ -0.22
MTHFD1-211ENST00000555709 CUL4AQ13619 759 aa13.66□□□□□ -0.22
MTHFD1-211ENST00000555709 BECN1Q14457 450 aa13.66□□□□□ -0.22
MTHFD1-211ENST00000555709 CATIPQ7Z7H3 387 aa13.66□□□□□ -0.22
MTHFD1-211ENST00000555709 MICU3Q86XE3 530 aa13.66□□□□□ -0.22
MTHFD1-211ENST00000555709 ACER1Q8TDN7 264 aa13.66□□□□□ -0.22
MTHFD1-211ENST00000555709 MYL10Q9BUA6 226 aa13.66□□□□□ -0.22
MTHFD1-211ENST00000555709 ASCC2Q9H1I8 757 aaPredicted RBP13.66□□□□□ -0.22
MTHFD1-211ENST00000555709 ZNF576Q9H609 170 aa13.66□□□□□ -0.22
MTHFD1-211ENST00000555709 CLIP2Q9UDT6 1046 aa13.66□□□□□ -0.22
MTHFD1-211ENST00000555709 MYO9BQ13459 2157 aa13.66□□□□□ -0.22
MTHFD1-211ENST00000555709 TCF20Q9UGU0 1960 aaKnown RBP13.65□□□□□ -0.22
MTHFD1-211ENST00000555709 XIRP2A4UGR9 3374 aa13.65□□□□□ -0.22
MTHFD1-211ENST00000555709 USP17L5A8MUK1 530 aa13.65□□□□□ -0.22
MTHFD1-211ENST00000555709 DNM1LO00429 736 aa13.65□□□□□ -0.22
MTHFD1-211ENST00000555709 PEX10O60683 326 aa13.65□□□□□ -0.22
MTHFD1-211ENST00000555709 SNHG28P0DPA3 235 aa13.65□□□□□ -0.22
MTHFD1-211ENST00000555709 RXRAP19793 462 aa13.65□□□□□ -0.22
MTHFD1-211ENST00000555709 DNAJB2P25686 324 aa13.65□□□□□ -0.22
MTHFD1-211ENST00000555709 EPHB4P54760 987 aa13.65□□□□□ -0.22
MTHFD1-211ENST00000555709 SCRN1Q12765 414 aa13.65□□□□□ -0.22
MTHFD1-211ENST00000555709 RASGRP2Q7LDG7 609 aa13.65□□□□□ -0.22
MTHFD1-211ENST00000555709 ALYREFQ86V81 257 aaKnown RBP13.65□□□□□ -0.22
MTHFD1-211ENST00000555709 RAB11FIP4Q86YS3 637 aa13.65□□□□□ -0.22
MTHFD1-211ENST00000555709 GMCL1P1Q8NEA9 526 aa13.65□□□□□ -0.22
MTHFD1-211ENST00000555709 PPM1EQ8WY54 764 aa13.65□□□□□ -0.22
MTHFD1-211ENST00000555709 MAP3K14Q99558 947 aa13.65□□□□□ -0.22
MTHFD1-211ENST00000555709 WDR18Q9BV38 432 aa13.65□□□□□ -0.22
MTHFD1-211ENST00000555709 ARHGEF10LQ9HCE6 1279 aa13.65□□□□□ -0.22
MTHFD1-211ENST00000555709 PDLIM7Q9NR12 457 aa13.65□□□□□ -0.22
MTHFD1-211ENST00000555709 FAM217BQ9NTX9 383 aaPredicted RBP13.65□□□□□ -0.22
MTHFD1-211ENST00000555709 ATP11BQ9Y2G3 1177 aa13.65□□□□□ -0.22
MTHFD1-211ENST00000555709 TMX2Q9Y320 296 aa13.65□□□□□ -0.22
MTHFD1-211ENST00000555709 TRIM43BA6NCK2 446 aa13.64□□□□□ -0.23
MTHFD1-211ENST00000555709 GOLGA8AA7E2F4 631 aa13.64□□□□□ -0.23
MTHFD1-211ENST00000555709 CALM1P0DP23 149 aa13.64□□□□□ -0.23
MTHFD1-211ENST00000555709 CALM2P0DP24 149 aa13.64□□□□□ -0.23
MTHFD1-211ENST00000555709 CALM3P0DP25 149 aa13.64□□□□□ -0.23
MTHFD1-211ENST00000555709 METAP2P50579 478 aaKnown RBP eCLIP13.64□□□□□ -0.23
MTHFD1-211ENST00000555709 ATP2B2Q01814 1243 aa13.64□□□□□ -0.23
MTHFD1-211ENST00000555709 STK3Q13188 491 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms