RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 COA7Q96BR5 231 aa11.1□□□□□ -0.63
HNRNPC-220ENST00000555585 FOXP1Q9H334 677 aaPredicted RBP11.1□□□□□ -0.63
HNRNPC-220ENST00000555585 ELP3Q9H9T3 547 aa11.1□□□□□ -0.63
HNRNPC-220ENST00000555585 C6orf50Q9HD87 102 aa11.1□□□□□ -0.63
HNRNPC-220ENST00000555585 TMOD4Q9NZQ9 345 aa11.1□□□□□ -0.63
HNRNPC-220ENST00000555585 CFAP45Q9UL16 551 aa11.1□□□□□ -0.63
HNRNPC-220ENST00000555585 PRR12Q9ULL5 1215 aa11.1□□□□□ -0.63
HNRNPC-220ENST00000555585 SNCAIPQ9Y6H5 919 aa11.1□□□□□ -0.63
HNRNPC-220ENST00000555585 PAPPA2Q9BXP8 1791 aa11.1□□□□□ -0.63
HNRNPC-220ENST00000555585 SMCO2A6NFE2 343 aa11.09□□□□□ -0.63
HNRNPC-220ENST00000555585 C19orf81C9J6K1 198 aa11.09□□□□□ -0.63
HNRNPC-220ENST00000555585 BACE1P56817 501 aa11.09□□□□□ -0.63
HNRNPC-220ENST00000555585 CEBPZQ03701 1054 aaKnown RBP11.09□□□□□ -0.63
HNRNPC-220ENST00000555585 FMR1Q06787 632 aaKnown RBP eCLIP11.09□□□□□ -0.63
HNRNPC-220ENST00000555585 NR5A1Q13285 461 aa11.09□□□□□ -0.63
HNRNPC-220ENST00000555585 QRICH1Q2TAL8 776 aa11.09□□□□□ -0.63
HNRNPC-220ENST00000555585 MYSM1Q5VVJ2 828 aa11.09□□□□□ -0.63
HNRNPC-220ENST00000555585 ATL3Q6DD88 541 aa11.09□□□□□ -0.63
HNRNPC-220ENST00000555585 GALNT17Q6IS24 598 aa11.09□□□□□ -0.63
HNRNPC-220ENST00000555585 NOSTRINQ8IVI9 506 aa11.09□□□□□ -0.63
HNRNPC-220ENST00000555585 BLIDQ8IZY5 108 aa11.09□□□□□ -0.63
HNRNPC-220ENST00000555585 FAM177A1Q8N128 213 aaPredicted RBP11.09□□□□□ -0.63
HNRNPC-220ENST00000555585 MTMR8Q96EF0 704 aa11.09□□□□□ -0.63
HNRNPC-220ENST00000555585 SPATA32Q96LK8 384 aa11.09□□□□□ -0.63
HNRNPC-220ENST00000555585 TANGO6Q9C0B7 1094 aa11.09□□□□□ -0.63
HNRNPC-220ENST00000555585 EMILIN3Q9NT22 766 aa11.09□□□□□ -0.63
HNRNPC-220ENST00000555585 PCDHA4Q9UN74 947 aa11.09□□□□□ -0.63
HNRNPC-220ENST00000555585 AFG3L2Q9Y4W6 797 aa11.09□□□□□ -0.63
HNRNPC-220ENST00000555585 ATMINO43313 823 aaPredicted RBP11.08□□□□□ -0.64
HNRNPC-220ENST00000555585 PLA2G6O60733 806 aa11.08□□□□□ -0.64
HNRNPC-220ENST00000555585 VCAM1P19320 739 aa11.08□□□□□ -0.64
HNRNPC-220ENST00000555585 GNA11P29992 359 aa11.08□□□□□ -0.64
HNRNPC-220ENST00000555585 HMGCS2P54868 508 aa11.08□□□□□ -0.64
HNRNPC-220ENST00000555585 MAP3K11Q16584 847 aa11.08□□□□□ -0.64
HNRNPC-220ENST00000555585 TPRNQ4KMQ1 711 aa11.08□□□□□ -0.64
HNRNPC-220ENST00000555585 TYW1BQ6NUM6 668 aa11.08□□□□□ -0.64
HNRNPC-220ENST00000555585 PPP1R18Q6NYC8 613 aa11.08□□□□□ -0.64
HNRNPC-220ENST00000555585 CCDC174Q6PII3 467 aa11.08□□□□□ -0.64
HNRNPC-220ENST00000555585 FBXO11Q86XK2 927 aa11.08□□□□□ -0.64
HNRNPC-220ENST00000555585 CLMNQ96JQ2 1002 aa11.08□□□□□ -0.64
HNRNPC-220ENST00000555585 USP28Q96RU2 1077 aa11.08□□□□□ -0.64
HNRNPC-220ENST00000555585 SCAND2PQ9GZW5 306 aaPredicted RBP11.08□□□□□ -0.64
HNRNPC-220ENST00000555585 RPAP3Q9H6T3 665 aaPredicted RBP11.08□□□□□ -0.64
HNRNPC-220ENST00000555585 LMBRD1Q9NUN5 540 aa11.08□□□□□ -0.64
HNRNPC-220ENST00000555585 FBXO28Q9NVF7 368 aa11.08□□□□□ -0.64
HNRNPC-220ENST00000555585 NOL7Q9UMY1 257 aaKnown RBP11.08□□□□□ -0.64
HNRNPC-220ENST00000555585 CTDP1Q9Y5B0 961 aaPredicted RBP11.08□□□□□ -0.64
HNRNPC-220ENST00000555585 MAP3K13O43283 966 aa11.07□□□□□ -0.64
HNRNPC-220ENST00000555585 PPP1R11O60927 126 aaPredicted RBP11.07□□□□□ -0.64
HNRNPC-220ENST00000555585 ATP2B1P20020 1258 aa11.07□□□□□ -0.64
HNRNPC-220ENST00000555585 ADCY7P51828 1080 aa11.07□□□□□ -0.64
HNRNPC-220ENST00000555585 PPATQ06203 517 aa11.07□□□□□ -0.64
HNRNPC-220ENST00000555585 TRAF1Q13077 416 aa11.07□□□□□ -0.64
HNRNPC-220ENST00000555585 STK38Q15208 465 aa11.07□□□□□ -0.64
HNRNPC-220ENST00000555585 NPY5RQ15761 445 aa11.07□□□□□ -0.64
HNRNPC-220ENST00000555585 USH1GQ495M9 461 aa11.07□□□□□ -0.64
HNRNPC-220ENST00000555585 ERO1BQ86YB8 467 aa11.07□□□□□ -0.64
HNRNPC-220ENST00000555585 DAGLBQ8NCG7 672 aa11.07□□□□□ -0.64
HNRNPC-220ENST00000555585 RBM46Q8TBY0 533 aaKnown RBP11.07□□□□□ -0.64
HNRNPC-220ENST00000555585 BICD2Q8TD16 824 aa11.07□□□□□ -0.64
HNRNPC-220ENST00000555585 LEO1Q8WVC0 666 aaPredicted RBP11.07□□□□□ -0.64
HNRNPC-220ENST00000555585 OTUD5Q96G74 571 aa11.07□□□□□ -0.64
HNRNPC-220ENST00000555585 SLF1Q9BQI6 1058 aa11.07□□□□□ -0.64
HNRNPC-220ENST00000555585 AMNQ9BXJ7 453 aa11.07□□□□□ -0.64
HNRNPC-220ENST00000555585 ZMYND12Q9H0C1 365 aa11.07□□□□□ -0.64
HNRNPC-220ENST00000555585 PCDHA1Q9Y5I3 950 aa11.07□□□□□ -0.64
HNRNPC-220ENST00000555585 SRCAPQ6ZRS2 3230 aa11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 CCDC194A0A1B0GVG4 234 aa11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 ESYT2A0FGR8 921 aa11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 SPDYE5A6NIY4 337 aa11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 ADAMTS3O15072 1205 aa11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 FLOT1O75955 427 aa11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 CELF2O95319 508 aaKnown RBP11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 NUBP1P53384 320 aa11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 SF3A1Q15459 793 aaKnown RBP11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 SKOR2Q2VWA4 1001 aaPredicted RBP11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 RILPL1Q5EBL4 403 aa11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 SH3D19Q5HYK7 790 aa11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 ANO1Q5XXA6 986 aa11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 GADL1Q6ZQY3 521 aa11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 PIK3AP1Q6ZUJ8 805 aa11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 C2orf69Q8N8R5 385 aa11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 PRPF38AQ8NAV1 312 aaKnown RBP11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 TMEM87AQ8NBN3 555 aa11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 RASGRP4Q8TDF6 673 aa11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 SLC39A7Q92504 469 aa11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 TNFRSF25Q93038 417 aa11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 SLC10A4Q96EP9 437 aa11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 C12orf42Q96LP6 360 aa11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 FTOQ9C0B1 505 aaKnown RBP eCLIP11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 RANBP17Q9H2T7 1088 aaKnown RBP11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 GBA2Q9HCG7 927 aaPredicted RBP11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 RTEL1Q9NZ71 1219 aa11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 BIN2Q9UBW5 565 aaPredicted RBP11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 PCDHA6Q9UN73 950 aa11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 PCDHA8Q9Y5H6 950 aa11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 CLIC4Q9Y696 253 aa11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 DDX49Q9Y6V7 483 aaKnown RBP11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 UTRNP46939 3433 aa11.06□□□□□ -0.64
HNRNPC-220ENST00000555585 GOLGA6L4A6NEF3 574 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms