RNA–Protein interactions for RNA: ENST00000555306.5

APEX1-209, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 898 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-209ENST00000555306 CDC37Q16543 378 aaPredicted RBP13.84□□□□□ -0.19
APEX1-209ENST00000555306 CCL15Q16663 113 aa13.84□□□□□ -0.19
APEX1-209ENST00000555306 QRICH1Q2TAL8 776 aa13.84□□□□□ -0.19
APEX1-209ENST00000555306 TREML2Q5T2D2 321 aa13.84□□□□□ -0.19
APEX1-209ENST00000555306 CCDC148Q8NFR7 591 aa13.84□□□□□ -0.19
APEX1-209ENST00000555306 BRI3BPQ8WY22 251 aa13.84□□□□□ -0.19
APEX1-209ENST00000555306 AMNQ9BXJ7 453 aa13.84□□□□□ -0.19
APEX1-209ENST00000555306 CPVLQ9H3G5 476 aa13.84□□□□□ -0.19
APEX1-209ENST00000555306 VAT1LQ9HCJ6 419 aa13.84□□□□□ -0.19
APEX1-209ENST00000555306 FBXO28Q9NVF7 368 aa13.84□□□□□ -0.19
APEX1-209ENST00000555306 ISY1Q9ULR0 285 aaKnown RBP13.84□□□□□ -0.19
APEX1-209ENST00000555306 ABT1Q9ULW3 272 aaKnown RBP13.84□□□□□ -0.19
APEX1-209ENST00000555306 WDR33Q9C0J8 1336 aaKnown RBP13.84□□□□□ -0.19
APEX1-209ENST00000555306 A0A0G2JMZ2 1700 aa13.84□□□□□ -0.19
APEX1-209ENST00000555306 VWA5AO00534 786 aa13.83□□□□□ -0.2
APEX1-209ENST00000555306 CALML3P27482 149 aa13.83□□□□□ -0.2
APEX1-209ENST00000555306 DGKZQ13574 1117 aa13.83□□□□□ -0.2
APEX1-209ENST00000555306 FBXO11Q86XK2 927 aa13.83□□□□□ -0.2
APEX1-209ENST00000555306 SAMD3Q8N6K7 520 aa13.83□□□□□ -0.2
APEX1-209ENST00000555306 REPS2Q8NFH8 660 aa13.83□□□□□ -0.2
APEX1-209ENST00000555306 KIFC2Q96AC6 838 aa13.83□□□□□ -0.2
APEX1-209ENST00000555306 COL11A1P12107 1806 aaPredicted RBP13.83□□□□□ -0.2
APEX1-209ENST00000555306 SPDYE16A6NNV3 312 aaPredicted RBP13.82□□□□□ -0.2
APEX1-209ENST00000555306 STXBP3O00186 592 aa13.82□□□□□ -0.2
APEX1-209ENST00000555306 BRD1O95696 1058 aa13.82□□□□□ -0.2
APEX1-209ENST00000555306 ICAM1P05362 532 aa13.82□□□□□ -0.2
APEX1-209ENST00000555306 TM4SF4P48230 202 aa13.82□□□□□ -0.2
APEX1-209ENST00000555306 IRX3P78415 501 aaPredicted RBP13.82□□□□□ -0.2
APEX1-209ENST00000555306 DEFB115Q30KQ5 88 aa13.82□□□□□ -0.2
APEX1-209ENST00000555306 KRT40Q6A162 431 aa13.82□□□□□ -0.2
APEX1-209ENST00000555306 WWC2Q6AWC2 1192 aa13.82□□□□□ -0.2
APEX1-209ENST00000555306 MCTP2Q6DN12 878 aa13.82□□□□□ -0.2
APEX1-209ENST00000555306 HOMER1Q86YM7 354 aa13.82□□□□□ -0.2
APEX1-209ENST00000555306 DAGLBQ8NCG7 672 aa13.82□□□□□ -0.2
APEX1-209ENST00000555306 PHF20Q9BVI0 1012 aa13.82□□□□□ -0.2
APEX1-209ENST00000555306 ZMYND12Q9H0C1 365 aa13.82□□□□□ -0.2
APEX1-209ENST00000555306 ASCC2Q9H1I8 757 aaPredicted RBP13.82□□□□□ -0.2
APEX1-209ENST00000555306 MTMR6Q9Y217 621 aa13.82□□□□□ -0.2
APEX1-209ENST00000555306 BTBD19C9JJ37 291 aa13.81□□□□□ -0.2
APEX1-209ENST00000555306 H3BQV1 296 aa13.81□□□□□ -0.2
APEX1-209ENST00000555306 PPP1R11O60927 126 aaPredicted RBP13.81□□□□□ -0.2
APEX1-209ENST00000555306 MMP1P03956 469 aa13.81□□□□□ -0.2
APEX1-209ENST00000555306 GNA11P29992 359 aa13.81□□□□□ -0.2
APEX1-209ENST00000555306 HERVK_113P62684 666 aa13.81□□□□□ -0.2
APEX1-209ENST00000555306 GHRHRQ02643 423 aa13.81□□□□□ -0.2
APEX1-209ENST00000555306 SREBF2Q12772 1141 aa13.81□□□□□ -0.2
APEX1-209ENST00000555306 NOGQ13253 232 aa13.81□□□□□ -0.2
APEX1-209ENST00000555306 SAFBQ15424 915 aaKnown RBP eCLIP13.81□□□□□ -0.2
APEX1-209ENST00000555306 TKFCQ3LXA3 575 aa13.81□□□□□ -0.2
APEX1-209ENST00000555306 IFFO2Q5TF58 517 aa13.81□□□□□ -0.2
APEX1-209ENST00000555306 OTUD7BQ6GQQ9 843 aa13.81□□□□□ -0.2
APEX1-209ENST00000555306 BICD2Q8TD16 824 aa13.81□□□□□ -0.2
APEX1-209ENST00000555306 ATG4CQ96DT6 458 aa13.81□□□□□ -0.2
APEX1-209ENST00000555306 AIFM3Q96NN9 605 aa13.81□□□□□ -0.2
APEX1-209ENST00000555306 P2RX7Q99572 595 aaKnown RBP13.81□□□□□ -0.2
APEX1-209ENST00000555306 FOXP1Q9H334 677 aaPredicted RBP13.81□□□□□ -0.2
APEX1-209ENST00000555306 ZSCAN16Q9H4T2 348 aaPredicted RBP13.81□□□□□ -0.2
APEX1-209ENST00000555306 MAP3K20Q9NYL2 800 aaKnown RBP13.81□□□□□ -0.2
APEX1-209ENST00000555306 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.81□□□□□ -0.2
APEX1-209ENST00000555306 PCDHA1Q9Y5I3 950 aa13.81□□□□□ -0.2
APEX1-209ENST00000555306 ZNF536O15090 1300 aa13.81□□□□□ -0.2
APEX1-209ENST00000555306 ABCB11O95342 1321 aa13.81□□□□□ -0.2
APEX1-209ENST00000555306 SMCHD1A6NHR9 2005 aa13.81□□□□□ -0.2
APEX1-209ENST00000555306 hCG_1642624A0A1W2PR95 340 aa13.8□□□□□ -0.2
APEX1-209ENST00000555306 PDHXO00330 501 aa13.8□□□□□ -0.2
APEX1-209ENST00000555306 PPFIA3O75145 1194 aa13.8□□□□□ -0.2
APEX1-209ENST00000555306 ZSCAN22P10073 491 aaPredicted RBP13.8□□□□□ -0.2
APEX1-209ENST00000555306 U2AF2P26368 475 aaKnown RBP eCLIP13.8□□□□□ -0.26e-9■□□□□ 10.7
APEX1-209ENST00000555306 COPB2P35606 906 aa13.8□□□□□ -0.2
APEX1-209ENST00000555306 GCLCP48506 637 aaPredicted RBP13.8□□□□□ -0.2
APEX1-209ENST00000555306 HEATR3Q7Z4Q2 680 aa13.8□□□□□ -0.2
APEX1-209ENST00000555306 PTPN18Q99952 460 aa13.8□□□□□ -0.2
APEX1-209ENST00000555306 BRMS1Q9HCU9 246 aa13.8□□□□□ -0.2
APEX1-209ENST00000555306 C6orf50Q9HD87 102 aa13.8□□□□□ -0.2
APEX1-209ENST00000555306 VPS54Q9P1Q0 977 aa13.8□□□□□ -0.2
APEX1-209ENST00000555306 ZNF214Q9UL59 606 aaPredicted RBP13.8□□□□□ -0.2
APEX1-209ENST00000555306 MRPL11Q9Y3B7 192 aaKnown RBP13.8□□□□□ -0.2
APEX1-209ENST00000555306 RABGAP1Q9Y3P9 1069 aa13.8□□□□□ -0.2
APEX1-209ENST00000555306 CTDP1Q9Y5B0 961 aaPredicted RBP13.8□□□□□ -0.2
APEX1-209ENST00000555306 PIK3CDO00329 1044 aa13.79□□□□□ -0.2
APEX1-209ENST00000555306 MRPL12P52815 198 aaKnown RBP13.79□□□□□ -0.2
APEX1-209ENST00000555306 NAPAP54920 295 aa13.79□□□□□ -0.2
APEX1-209ENST00000555306 NLRP5P59047 1200 aa13.79□□□□□ -0.2
APEX1-209ENST00000555306 NPY5RQ15761 445 aa13.79□□□□□ -0.2
APEX1-209ENST00000555306 TYW1BQ6NUM6 668 aa13.79□□□□□ -0.2
APEX1-209ENST00000555306 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.79□□□□□ -0.2
APEX1-209ENST00000555306 BRAPQ7Z569 592 aa13.79□□□□□ -0.2
APEX1-209ENST00000555306 PIBF1Q8WXW3 757 aa13.79□□□□□ -0.2
APEX1-209ENST00000555306 GPKOWQ92917 476 aaPredicted RBP eCLIP13.79□□□□□ -0.29e-8■■■□□ 15.2
APEX1-209ENST00000555306 SHISA4Q96DD7 197 aa13.79□□□□□ -0.2
APEX1-209ENST00000555306 PARK7Q99497 189 aaKnown RBP13.79□□□□□ -0.2
APEX1-209ENST00000555306 TEX13BQ9BXU2 312 aa13.79□□□□□ -0.2
APEX1-209ENST00000555306 RIC8AQ9NPQ8 531 aa13.79□□□□□ -0.2
APEX1-209ENST00000555306 PCDHA4Q9UN74 947 aa13.79□□□□□ -0.2
APEX1-209ENST00000555306 ZDHHC9Q9Y397 364 aa13.79□□□□□ -0.2
APEX1-209ENST00000555306 VPS37CA5D8V6 355 aaPredicted RBP13.78□□□□□ -0.2
APEX1-209ENST00000555306 SMCO2A6NFE2 343 aa13.78□□□□□ -0.2
APEX1-209ENST00000555306 M0R2N6 131 aa13.78□□□□□ -0.2
APEX1-209ENST00000555306 DTNBO60941 627 aa13.78□□□□□ -0.2
APEX1-209ENST00000555306 SLC25A27O95847 323 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms