RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 RRP36Q96EU6 259 aaKnown RBP20.32■□□□□ 0.84
PSEN1-212ENST00000555254 SPZ1Q9BXG8 430 aa20.32■□□□□ 0.84
PSEN1-212ENST00000555254 GOPCQ9HD26 462 aa20.32■□□□□ 0.84
PSEN1-212ENST00000555254 GPCPD1Q9NPB8 672 aa20.32■□□□□ 0.84
PSEN1-212ENST00000555254 MYH8P13535 1937 aa20.31■□□□□ 0.84
PSEN1-212ENST00000555254 CNTNAP5Q8WYK1 1306 aa20.31■□□□□ 0.84
PSEN1-212ENST00000555254 A0A1W2PRG0 241 aa20.31■□□□□ 0.84
PSEN1-212ENST00000555254 GOLGA8HP0CJ92 632 aa20.31■□□□□ 0.84
PSEN1-212ENST00000555254 SNHG28P0DPA3 235 aa20.31■□□□□ 0.84
PSEN1-212ENST00000555254 SLC1A4P43007 532 aa20.31■□□□□ 0.84
PSEN1-212ENST00000555254 USP14P54578 494 aa20.31■□□□□ 0.84
PSEN1-212ENST00000555254 ZNF543Q08ER8 600 aa20.31■□□□□ 0.84
PSEN1-212ENST00000555254 KRT40Q6A162 431 aa20.31■□□□□ 0.84
PSEN1-212ENST00000555254 CD99L2Q8TCZ2 262 aa20.31■□□□□ 0.84
PSEN1-212ENST00000555254 SMCR8Q8TEV9 937 aaPredicted RBP20.31■□□□□ 0.84
PSEN1-212ENST00000555254 KIAA1683Q9H0B3 1180 aa20.31■□□□□ 0.84
PSEN1-212ENST00000555254 SEC63Q9UGP8 760 aaKnown RBP20.31■□□□□ 0.84
PSEN1-212ENST00000555254 SLC45A1Q9Y2W3 748 aa20.31■□□□□ 0.84
PSEN1-212ENST00000555254 FRMPD2Q68DX3 1309 aaPredicted RBP20.3■□□□□ 0.84
PSEN1-212ENST00000555254 F5H6K3 240 aa20.3■□□□□ 0.84
PSEN1-212ENST00000555254 SCG2P13521 617 aa20.3■□□□□ 0.84
PSEN1-212ENST00000555254 NCLP19338 710 aaKnown RBP20.3■□□□□ 0.84
PSEN1-212ENST00000555254 KLRC3Q07444 240 aa20.3■□□□□ 0.84
PSEN1-212ENST00000555254 FOXD4L6Q3SYB3 417 aaPredicted RBP20.3■□□□□ 0.84
PSEN1-212ENST00000555254 FOXD4L3Q6VB84 417 aaPredicted RBP20.3■□□□□ 0.84
PSEN1-212ENST00000555254 SIAH1Q8IUQ4 282 aa20.3■□□□□ 0.84
PSEN1-212ENST00000555254 PIBF1Q8WXW3 757 aa20.3■□□□□ 0.84
PSEN1-212ENST00000555254 BRMS1Q9HCU9 246 aa20.3■□□□□ 0.84
PSEN1-212ENST00000555254 PNMA3Q9UL41 463 aa20.3■□□□□ 0.84
PSEN1-212ENST00000555254 IRX3P78415 501 aaPredicted RBP20.29■□□□□ 0.84
PSEN1-212ENST00000555254 RESTQ13127 1097 aa20.29■□□□□ 0.84
PSEN1-212ENST00000555254 NBR1Q14596 966 aa20.29■□□□□ 0.84
PSEN1-212ENST00000555254 PFKFB3Q16875 520 aaPredicted RBP20.29■□□□□ 0.84
PSEN1-212ENST00000555254 BRAPQ7Z569 592 aa20.29■□□□□ 0.84
PSEN1-212ENST00000555254 CTU1Q7Z7A3 348 aaKnown RBP20.29■□□□□ 0.84
PSEN1-212ENST00000555254 ERO1AQ96HE7 468 aa20.29■□□□□ 0.84
PSEN1-212ENST00000555254 GMCL1Q96IK5 515 aa20.29■□□□□ 0.84
PSEN1-212ENST00000555254 ZNF396Q96N95 335 aaPredicted RBP20.29■□□□□ 0.84
PSEN1-212ENST00000555254 AIFM3Q96NN9 605 aa20.29■□□□□ 0.84
PSEN1-212ENST00000555254 ASCC2Q9H1I8 757 aaPredicted RBP20.29■□□□□ 0.84
PSEN1-212ENST00000555254 VAT1LQ9HCJ6 419 aa20.29■□□□□ 0.84
PSEN1-212ENST00000555254 TMX2Q9Y320 296 aa20.29■□□□□ 0.84
PSEN1-212ENST00000555254 KRT85P78386 507 aa20.28■□□□□ 0.84
PSEN1-212ENST00000555254 ATL3Q6DD88 541 aa20.28■□□□□ 0.84
PSEN1-212ENST00000555254 C17orf99Q6UX52 265 aa20.28■□□□□ 0.84
PSEN1-212ENST00000555254 FAM177A1Q8N128 213 aaPredicted RBP20.28■□□□□ 0.84
PSEN1-212ENST00000555254 UBA5Q9GZZ9 404 aa20.28■□□□□ 0.84
PSEN1-212ENST00000555254 SH3GLB2Q9NR46 395 aa20.28■□□□□ 0.84
PSEN1-212ENST00000555254 ATAD5Q96QE3 1844 aa20.27■□□□□ 0.84
PSEN1-212ENST00000555254 hCG_1642624A0A1W2PR95 340 aa20.27■□□□□ 0.84
PSEN1-212ENST00000555254 NDUFB10O96000 172 aa20.27■□□□□ 0.84
PSEN1-212ENST00000555254 BMP3P12645 472 aa20.27■□□□□ 0.84
PSEN1-212ENST00000555254 CALML3P27482 149 aa20.27■□□□□ 0.84
PSEN1-212ENST00000555254 NLRP5P59047 1200 aa20.27■□□□□ 0.84
PSEN1-212ENST00000555254 IKQ13123 557 aaPredicted RBP20.27■□□□□ 0.84
PSEN1-212ENST00000555254 KIF22Q14807 665 aa20.27■□□□□ 0.84
PSEN1-212ENST00000555254 PKN1Q16512 942 aa20.27■□□□□ 0.84
PSEN1-212ENST00000555254 SPICE1Q8N0Z3 855 aa20.27■□□□□ 0.84
PSEN1-212ENST00000555254 CCDC12Q8WUD4 166 aaPredicted RBP20.27■□□□□ 0.84
PSEN1-212ENST00000555254 P2RX7Q99572 595 aaKnown RBP20.27■□□□□ 0.84
PSEN1-212ENST00000555254 CFAP45Q9UL16 551 aa20.27■□□□□ 0.84
PSEN1-212ENST00000555254 PHIPQ8WWQ0 1821 aa20.27■□□□□ 0.84
PSEN1-212ENST00000555254 USP17L15C9J2P7 530 aa20.26■□□□□ 0.83
PSEN1-212ENST00000555254 USP17L13C9JLJ4 530 aa20.26■□□□□ 0.83
PSEN1-212ENST00000555254 USP17L11C9JVI0 530 aa20.26■□□□□ 0.83
PSEN1-212ENST00000555254 USP17L18D6R9N7 530 aa20.26■□□□□ 0.83
PSEN1-212ENST00000555254 USP17L22D6RA61 530 aa20.26■□□□□ 0.83
PSEN1-212ENST00000555254 USP17L17D6RBQ6 530 aa20.26■□□□□ 0.83
PSEN1-212ENST00000555254 USP17L19D6RCP7 530 aa20.26■□□□□ 0.83
PSEN1-212ENST00000555254 USP17L20D6RJB6 530 aa20.26■□□□□ 0.83
PSEN1-212ENST00000555254 MMP1P03956 469 aa20.26■□□□□ 0.83
PSEN1-212ENST00000555254 VCAM1P19320 739 aa20.26■□□□□ 0.83
PSEN1-212ENST00000555254 HOXA7P31268 230 aaPredicted RBP20.26■□□□□ 0.83
PSEN1-212ENST00000555254 USP17L24Q0WX57 530 aa20.26■□□□□ 0.83
PSEN1-212ENST00000555254 KCTD1Q719H9 257 aa20.26■□□□□ 0.83
PSEN1-212ENST00000555254 ANKRD13CQ8N6S4 541 aa20.26■□□□□ 0.83
PSEN1-212ENST00000555254 CCDC148Q8NFR7 591 aa20.26■□□□□ 0.83
PSEN1-212ENST00000555254 C12orf42Q96LP6 360 aa20.26■□□□□ 0.83
PSEN1-212ENST00000555254 RPAP3Q9H6T3 665 aaPredicted RBP20.26■□□□□ 0.83
PSEN1-212ENST00000555254 RIOX1Q9H6W3 641 aa20.26■□□□□ 0.83
PSEN1-212ENST00000555254 VPS54Q9P1Q0 977 aa20.26■□□□□ 0.83
PSEN1-212ENST00000555254 TRIM17Q9Y577 477 aa20.26■□□□□ 0.83
PSEN1-212ENST00000555254 ADGRA2Q96PE1 1338 aa20.26■□□□□ 0.83
PSEN1-212ENST00000555254 hCG_1984214I3L0E3 225 aa20.25■□□□□ 0.83
PSEN1-212ENST00000555254 DNM1Q05193 864 aaKnown RBP20.25■□□□□ 0.83
PSEN1-212ENST00000555254 KIAA1755Q5JYT7 1200 aa20.25■□□□□ 0.83
PSEN1-212ENST00000555254 HEATR3Q7Z4Q2 680 aa20.25■□□□□ 0.83
PSEN1-212ENST00000555254 ZNF713Q8N859 430 aaPredicted RBP20.25■□□□□ 0.83
PSEN1-212ENST00000555254 TANGO6Q9C0B7 1094 aa20.25■□□□□ 0.83
PSEN1-212ENST00000555254 ARHGAP39Q9C0H5 1083 aa20.25■□□□□ 0.83
PSEN1-212ENST00000555254 VCPKMTQ9H867 229 aa20.25■□□□□ 0.83
PSEN1-212ENST00000555254 EFCC1Q9HA90 598 aa20.25■□□□□ 0.83
PSEN1-212ENST00000555254 GJB4Q9NTQ9 266 aa20.25■□□□□ 0.83
PSEN1-212ENST00000555254 KCNJ14Q9UNX9 436 aa20.25■□□□□ 0.83
PSEN1-212ENST00000555254 GREB1LQ9C091 1923 aaPredicted RBP20.25■□□□□ 0.83
PSEN1-212ENST00000555254 BCRP11274 1271 aa20.24■□□□□ 0.83
PSEN1-212ENST00000555254 KRT2P35908 639 aa20.24■□□□□ 0.83
PSEN1-212ENST00000555254 LACTBP83111 547 aaPredicted RBP20.24■□□□□ 0.83
PSEN1-212ENST00000555254 ARHGEF6Q15052 776 aa20.24■□□□□ 0.83
PSEN1-212ENST00000555254 SKOR2Q2VWA4 1001 aaPredicted RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms