RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 ZNF174Q15697 407 aa17.91■□□□□ 0.46
MARK3-209ENST00000555235 NPY5RQ15761 445 aa17.91■□□□□ 0.46
MARK3-209ENST00000555235 SKIDA1Q1XH10 827 aa17.91■□□□□ 0.46
MARK3-209ENST00000555235 FNBP4Q8N3X1 1017 aaPredicted RBP17.91■□□□□ 0.46
MARK3-209ENST00000555235 ATXN2Q99700 1313 aaKnown RBP17.9■□□□□ 0.46
MARK3-209ENST00000555235 COBLO75128 1261 aa17.9■□□□□ 0.46
MARK3-209ENST00000555235 ZMYND10O75800 440 aa17.9■□□□□ 0.46
MARK3-209ENST00000555235 LIG3P49916 1009 aa17.9■□□□□ 0.46
MARK3-209ENST00000555235 ITIH3Q06033 890 aa17.9■□□□□ 0.46
MARK3-209ENST00000555235 MEA1Q16626 185 aa17.9■□□□□ 0.46
MARK3-209ENST00000555235 BLZF1Q9H2G9 400 aa17.9■□□□□ 0.46
MARK3-209ENST00000555235 GNL3LQ9NVN8 582 aaKnown RBP17.9■□□□□ 0.46
MARK3-209ENST00000555235 RBM28Q9NW13 759 aaKnown RBP17.9■□□□□ 0.46
MARK3-209ENST00000555235 MAGEB6P1A0A0J9YX57 407 aa17.89■□□□□ 0.46
MARK3-209ENST00000555235 PARP1P09874 1014 aaKnown RBP17.89■□□□□ 0.46
MARK3-209ENST00000555235 EEF1GP26641 437 aaKnown RBP17.89■□□□□ 0.46
MARK3-209ENST00000555235 ATP2C1P98194 919 aaPredicted RBP17.89■□□□□ 0.46
MARK3-209ENST00000555235 TTC38Q5R3I4 469 aa17.89■□□□□ 0.46
MARK3-209ENST00000555235 PDXDC2PQ6P474 469 aa17.89■□□□□ 0.46
MARK3-209ENST00000555235 CATIPQ7Z7H3 387 aa17.89■□□□□ 0.46
MARK3-209ENST00000555235 GSPT2Q8IYD1 628 aaKnown RBP17.89■□□□□ 0.46
MARK3-209ENST00000555235 CCDC170Q8IYT3 715 aa17.89■□□□□ 0.46
MARK3-209ENST00000555235 STAMQ92783 540 aa17.89■□□□□ 0.46
MARK3-209ENST00000555235 IDEP14735 1019 aa17.89■□□□□ 0.45
MARK3-209ENST00000555235 IGHMBP2P38935 993 aaKnown RBP17.89■□□□□ 0.45
MARK3-209ENST00000555235 WDR59Q6PJI9 974 aa17.89■□□□□ 0.45
MARK3-209ENST00000555235 MMGT1Q8N4V1 131 aa17.89■□□□□ 0.45
MARK3-209ENST00000555235 SH3GL2Q99962 352 aa17.89■□□□□ 0.45
MARK3-209ENST00000555235 ZNHIT6Q9NWK9 470 aaKnown RBP17.89■□□□□ 0.45
MARK3-209ENST00000555235 GRIN2DO15399 1336 aa17.89■□□□□ 0.45
MARK3-209ENST00000555235 INPP5BP32019 993 aa17.88■□□□□ 0.45
MARK3-209ENST00000555235 TROAPQ12815 778 aa17.88■□□□□ 0.45
MARK3-209ENST00000555235 CCDC152Q4G0S7 254 aa17.88■□□□□ 0.45
MARK3-209ENST00000555235 IFIT1BQ5T764 474 aaKnown RBP17.88■□□□□ 0.45
MARK3-209ENST00000555235 KAT2BQ92831 832 aa17.88■□□□□ 0.45
MARK3-209ENST00000555235 PURBQ96QR8 312 aaKnown RBP17.88■□□□□ 0.45
MARK3-209ENST00000555235 RIOK1Q9BRS2 568 aaKnown RBP17.88■□□□□ 0.45
MARK3-209ENST00000555235 TSGA10Q9BZW7 698 aa17.88■□□□□ 0.45
MARK3-209ENST00000555235 JADE2Q9NQC1 790 aa17.88■□□□□ 0.45
MARK3-209ENST00000555235 PDS5AQ29RF7 1337 aaKnown RBP17.88■□□□□ 0.45
MARK3-209ENST00000555235 DUOX1Q9NRD9 1551 aa17.88■□□□□ 0.45
MARK3-209ENST00000555235 RPN1P04843 607 aaKnown RBP17.88■□□□□ 0.45
MARK3-209ENST00000555235 EPB41P11171 864 aaKnown RBP17.88■□□□□ 0.45
MARK3-209ENST00000555235 GNGT1P63211 74 aa17.88■□□□□ 0.45
MARK3-209ENST00000555235 CHRNDQ07001 517 aa17.88■□□□□ 0.45
MARK3-209ENST00000555235 PTGDRQ13258 359 aa17.88■□□□□ 0.45
MARK3-209ENST00000555235 NUP58Q9BVL2 599 aa17.88■□□□□ 0.45
MARK3-209ENST00000555235 FGRP09769 529 aa17.87■□□□□ 0.45
MARK3-209ENST00000555235 CALM1P0DP23 149 aa17.87■□□□□ 0.45
MARK3-209ENST00000555235 CALM2P0DP24 149 aa17.87■□□□□ 0.45
MARK3-209ENST00000555235 CALM3P0DP25 149 aa17.87■□□□□ 0.45
MARK3-209ENST00000555235 DNM2P50570 870 aa17.87■□□□□ 0.45
MARK3-209ENST00000555235 TMTC3Q6ZXV5 915 aa17.87■□□□□ 0.45
MARK3-209ENST00000555235 B4GALNT4Q76KP1 1039 aa17.87■□□□□ 0.45
MARK3-209ENST00000555235 ZNF572Q7Z3I7 529 aaPredicted RBP17.87■□□□□ 0.45
MARK3-209ENST00000555235 SPATS2Q86XZ4 545 aaKnown RBP17.87■□□□□ 0.45
MARK3-209ENST00000555235 RETREG2Q8NC44 543 aa17.87■□□□□ 0.45
MARK3-209ENST00000555235 ZNF507Q8TCN5 953 aa17.87■□□□□ 0.45
MARK3-209ENST00000555235 PDE2AO00408 941 aaPredicted RBP17.87■□□□□ 0.45
MARK3-209ENST00000555235 PRCPP42785 496 aa17.87■□□□□ 0.45
MARK3-209ENST00000555235 C2orf54Q08AI8 447 aa17.87■□□□□ 0.45
MARK3-209ENST00000555235 ALS2CLQ60I27 953 aa17.87■□□□□ 0.45
MARK3-209ENST00000555235 SND1Q7KZF4 910 aaKnown RBP eCLIP17.87■□□□□ 0.45
MARK3-209ENST00000555235 ANKRD18AQ8IVF6 992 aa17.87■□□□□ 0.45
MARK3-209ENST00000555235 THAP9Q9H5L6 903 aa17.87■□□□□ 0.45
MARK3-209ENST00000555235 COL22A1Q8NFW1 1626 aaPredicted RBP17.86■□□□□ 0.45
MARK3-209ENST00000555235 ZNF804BA4D1E1 1349 aa17.86■□□□□ 0.45
MARK3-209ENST00000555235 HNRNPH1P31943 449 aaKnown RBP17.86■□□□□ 0.45
MARK3-209ENST00000555235 EPHB4P54760 987 aa17.86■□□□□ 0.45
MARK3-209ENST00000555235 GSCP56915 257 aaPredicted RBP17.86■□□□□ 0.45
MARK3-209ENST00000555235 SKOR1P84550 965 aa17.86■□□□□ 0.45
MARK3-209ENST00000555235 IRF2BP1Q8IU81 584 aa17.86■□□□□ 0.45
MARK3-209ENST00000555235 SECISBP2LQ93073 1101 aaKnown RBP17.86■□□□□ 0.45
MARK3-209ENST00000555235 RUFY1Q96T51 708 aa17.86■□□□□ 0.45
MARK3-209ENST00000555235 MTRQ99707 1265 aa17.86■□□□□ 0.45
MARK3-209ENST00000555235 BRIP1Q9BX63 1249 aa17.86■□□□□ 0.45
MARK3-209ENST00000555235 MAGEC2Q9UBF1 373 aaPredicted RBP17.86■□□□□ 0.45
MARK3-209ENST00000555235 CNTNAP5Q8WYK1 1306 aa17.86■□□□□ 0.45
MARK3-209ENST00000555235 CYP2D7A0A087X1C5 515 aa17.86■□□□□ 0.45
MARK3-209ENST00000555235 LOC102724159A0A0B4J2E5 919 aa17.86■□□□□ 0.45
MARK3-209ENST00000555235 PES1O00541 588 aaKnown RBP17.86■□□□□ 0.45
MARK3-209ENST00000555235 ZNF185O15231 689 aa17.86■□□□□ 0.45
MARK3-209ENST00000555235 DDAH1O94760 285 aa17.86■□□□□ 0.45
MARK3-209ENST00000555235 MNAT1P51948 309 aa17.86■□□□□ 0.45
MARK3-209ENST00000555235 KIF5AQ12840 1032 aa17.86■□□□□ 0.45
MARK3-209ENST00000555235 PWP2Q15269 919 aaKnown RBP17.86■□□□□ 0.45
MARK3-209ENST00000555235 EMBQ6PCB8 327 aa17.86■□□□□ 0.45
MARK3-209ENST00000555235 CNPY4Q8N129 248 aa17.86■□□□□ 0.45
MARK3-209ENST00000555235 TRIM58Q8NG06 486 aa17.86■□□□□ 0.45
MARK3-209ENST00000555235 LACRTQ9GZZ8 138 aa17.86■□□□□ 0.45
MARK3-209ENST00000555235 NHEJ1Q9H9Q4 299 aaPredicted RBP17.86■□□□□ 0.45
MARK3-209ENST00000555235 ABCF2Q9UG63 623 aa17.86■□□□□ 0.45
MARK3-209ENST00000555235 TFR2Q9UP52 801 aa17.86■□□□□ 0.45
MARK3-209ENST00000555235 PRLRP16471 622 aa17.85■□□□□ 0.45
MARK3-209ENST00000555235 TRAPPC10P48553 1259 aa17.85■□□□□ 0.45
MARK3-209ENST00000555235 IL17AQ16552 155 aa17.85■□□□□ 0.45
MARK3-209ENST00000555235 IQCA1Q86XH1 822 aa17.85■□□□□ 0.45
MARK3-209ENST00000555235 ADSSL1Q8N142 457 aa17.85■□□□□ 0.45
MARK3-209ENST00000555235 SNX12Q9UMY4 172 aa17.85■□□□□ 0.45
MARK3-209ENST00000555235 GDAQ9Y2T3 454 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms