RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 SLFN13Q68D06 897 aa18.43■□□□□ 0.54
NEDD1-207ENST00000555114 LRRC47Q8N1G4 583 aaKnown RBP18.43■□□□□ 0.54
NEDD1-207ENST00000555114 EPB41L4AQ9HCS5 686 aaPredicted RBP18.43■□□□□ 0.54
NEDD1-207ENST00000555114 A0A0U1RQG5 324 aaPredicted RBP18.42■□□□□ 0.54
NEDD1-207ENST00000555114 ERC2O15083 957 aa18.42■□□□□ 0.54
NEDD1-207ENST00000555114 TLR3O15455 904 aaKnown RBP18.42■□□□□ 0.54
NEDD1-207ENST00000555114 ASGR1P07306 291 aa18.42■□□□□ 0.54
NEDD1-207ENST00000555114 STAT2P52630 851 aa18.42■□□□□ 0.54
NEDD1-207ENST00000555114 EPHB4P54760 987 aa18.42■□□□□ 0.54
NEDD1-207ENST00000555114 IKQ13123 557 aaPredicted RBP18.42■□□□□ 0.54
NEDD1-207ENST00000555114 PPIGQ13427 754 aaKnown RBP eCLIP18.42■□□□□ 0.54
NEDD1-207ENST00000555114 CCDC144BQ3MJ40 725 aa18.42■□□□□ 0.54
NEDD1-207ENST00000555114 CCSAPQ6IQ19 270 aaPredicted RBP18.42■□□□□ 0.54
NEDD1-207ENST00000555114 ARMCX2Q7L311 632 aa18.42■□□□□ 0.54
NEDD1-207ENST00000555114 FAM160B2Q86V87 743 aa18.42■□□□□ 0.54
NEDD1-207ENST00000555114 IFNL3Q8IZI9 196 aa18.42■□□□□ 0.54
NEDD1-207ENST00000555114 DCTPP1Q9H773 170 aa18.42■□□□□ 0.54
NEDD1-207ENST00000555114 ACAD9Q9H845 621 aa18.42■□□□□ 0.54
NEDD1-207ENST00000555114 PLIN4Q96Q06 1357 aa18.42■□□□□ 0.54
NEDD1-207ENST00000555114 M0R2C6 588 aa18.41■□□□□ 0.54
NEDD1-207ENST00000555114 GJA9P57773 515 aa18.41■□□□□ 0.54
NEDD1-207ENST00000555114 GNASQ5JWF2 1037 aa18.41■□□□□ 0.54
NEDD1-207ENST00000555114 MFSD5Q6N075 450 aa18.41■□□□□ 0.54
NEDD1-207ENST00000555114 TMEM199Q8N511 208 aa18.41■□□□□ 0.54
NEDD1-207ENST00000555114 NEDD1Q8NHV4 660 aa18.41■□□□□ 0.54
NEDD1-207ENST00000555114 CHURC1Q8WUH1 139 aa18.41■□□□□ 0.54
NEDD1-207ENST00000555114 NAPBQ9H115 298 aa18.41■□□□□ 0.54
NEDD1-207ENST00000555114 UPF3AQ9H1J1 476 aaKnown RBP18.41■□□□□ 0.54
NEDD1-207ENST00000555114 TBX21Q9UL17 535 aa18.41■□□□□ 0.54
NEDD1-207ENST00000555114 TTC41PQ6P2S7 1318 aa18.41■□□□□ 0.54
NEDD1-207ENST00000555114 MYADML2A6NDP7 307 aa18.4■□□□□ 0.54
NEDD1-207ENST00000555114 TMEM232C9JQI7 657 aa18.4■□□□□ 0.54
NEDD1-207ENST00000555114 DNAJB2P25686 324 aa18.4■□□□□ 0.54
NEDD1-207ENST00000555114 TKFCQ3LXA3 575 aa18.4■□□□□ 0.54
NEDD1-207ENST00000555114 C20orf194Q5TEA3 1177 aa18.4■□□□□ 0.54
NEDD1-207ENST00000555114 TSHZ3Q63HK5 1081 aa18.4■□□□□ 0.54
NEDD1-207ENST00000555114 CCDC144CPQ8IYA2 1237 aa18.4■□□□□ 0.54
NEDD1-207ENST00000555114 HOMER2Q9NSB8 354 aa18.4■□□□□ 0.54
NEDD1-207ENST00000555114 MYH4Q9Y623 1939 aa18.39■□□□□ 0.53
NEDD1-207ENST00000555114 ASB14A6NK59 587 aa18.39■□□□□ 0.53
NEDD1-207ENST00000555114 ARVCFO00192 962 aa18.39■□□□□ 0.53
NEDD1-207ENST00000555114 SLC1A4P43007 532 aa18.39■□□□□ 0.53
NEDD1-207ENST00000555114 TFAP4Q01664 338 aa18.39■□□□□ 0.53
NEDD1-207ENST00000555114 NOL8Q76FK4 1167 aaKnown RBP18.39■□□□□ 0.53
NEDD1-207ENST00000555114 SYMPKQ92797 1274 aaKnown RBP18.39■□□□□ 0.53
NEDD1-207ENST00000555114 FSD1Q9BTV5 496 aa18.39■□□□□ 0.53
NEDD1-207ENST00000555114 ZEB2O60315 1214 aa18.38■□□□□ 0.53
NEDD1-207ENST00000555114 CABYRO75952 493 aa18.38■□□□□ 0.53
NEDD1-207ENST00000555114 CDK7P50613 346 aa18.38■□□□□ 0.53
NEDD1-207ENST00000555114 PPARAQ07869 468 aa18.38■□□□□ 0.53
NEDD1-207ENST00000555114 PSRC1Q6PGN9 363 aaPredicted RBP18.38■□□□□ 0.53
NEDD1-207ENST00000555114 CCDC129Q6ZRS4 1044 aa18.38■□□□□ 0.53
NEDD1-207ENST00000555114 STAG1Q8WVM7 1258 aa18.38■□□□□ 0.53
NEDD1-207ENST00000555114 TIFAQ96CG3 184 aa18.38■□□□□ 0.53
NEDD1-207ENST00000555114 GMCL1Q96IK5 515 aa18.38■□□□□ 0.53
NEDD1-207ENST00000555114 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.38■□□□□ 0.53
NEDD1-207ENST00000555114 MTIF3Q9H2K0 278 aaKnown RBP18.38■□□□□ 0.53
NEDD1-207ENST00000555114 RNF146Q9NTX7 359 aa18.38■□□□□ 0.53
NEDD1-207ENST00000555114 TNFAIP2Q03169 654 aa18.37■□□□□ 0.53
NEDD1-207ENST00000555114 FGD4Q96M96 766 aa18.37■□□□□ 0.53
NEDD1-207ENST00000555114 SEZ6LQ9BYH1 1024 aa18.37■□□□□ 0.53
NEDD1-207ENST00000555114 AP5M1Q9H0R1 490 aa18.37■□□□□ 0.53
NEDD1-207ENST00000555114 ZNF576Q9H609 170 aa18.37■□□□□ 0.53
NEDD1-207ENST00000555114 STX8Q9UNK0 236 aa18.37■□□□□ 0.53
NEDD1-207ENST00000555114 LAMA2P24043 3122 aaKnown RBP18.36■□□□□ 0.53
NEDD1-207ENST00000555114 TSPY2A6NKD2 308 aa18.36■□□□□ 0.53
NEDD1-207ENST00000555114 PLA2G6O60733 806 aa18.36■□□□□ 0.53
NEDD1-207ENST00000555114 NKX3-2P78367 333 aa18.36■□□□□ 0.53
NEDD1-207ENST00000555114 FAM126BQ8IXS8 530 aa18.36■□□□□ 0.53
NEDD1-207ENST00000555114 UNC80Q8N2C7 3258 aa18.36■□□□□ 0.53
NEDD1-207ENST00000555114 FAM133AQ8N9E0 248 aa18.36■□□□□ 0.53
NEDD1-207ENST00000555114 TRERF1Q96PN7 1200 aa18.36■□□□□ 0.53
NEDD1-207ENST00000555114 A1CFQ9NQ94 594 aaKnown RBP18.36■□□□□ 0.53
NEDD1-207ENST00000555114 ZBTB47Q9UFB7 747 aaPredicted RBP18.36■□□□□ 0.53
NEDD1-207ENST00000555114 ADCY6O43306 1168 aa18.35■□□□□ 0.53
NEDD1-207ENST00000555114 ALAS1P13196 640 aa18.35■□□□□ 0.53
NEDD1-207ENST00000555114 CSF2RAP15509 400 aa18.35■□□□□ 0.53
NEDD1-207ENST00000555114 MCCP23508 829 aa18.35■□□□□ 0.53
NEDD1-207ENST00000555114 CNTN2Q02246 1040 aa18.35■□□□□ 0.53
NEDD1-207ENST00000555114 GRIN2CQ14957 1233 aa18.35■□□□□ 0.53
NEDD1-207ENST00000555114 TMEM240Q5SV17 173 aa18.35■□□□□ 0.53
NEDD1-207ENST00000555114 TLK2Q86UE8 772 aa18.35■□□□□ 0.53
NEDD1-207ENST00000555114 AGBL1Q96MI9 1066 aa18.35■□□□□ 0.53
NEDD1-207ENST00000555114 GAS2L1Q99501 681 aaPredicted RBP18.35■□□□□ 0.53
NEDD1-207ENST00000555114 PPP1R12CQ9BZL4 782 aa18.35■□□□□ 0.53
NEDD1-207ENST00000555114 KATNBL1Q9H079 304 aa18.35■□□□□ 0.53
NEDD1-207ENST00000555114 IRX5P78411 483 aaPredicted RBP18.34■□□□□ 0.53
NEDD1-207ENST00000555114 ZMYM1Q5SVZ6 1142 aa18.34■□□□□ 0.53
NEDD1-207ENST00000555114 RCSD1Q6JBY9 416 aa18.34■□□□□ 0.53
NEDD1-207ENST00000555114 SEC62Q99442 399 aaKnown RBP18.34■□□□□ 0.53
NEDD1-207ENST00000555114 ZNF536O15090 1300 aa18.33■□□□□ 0.53
NEDD1-207ENST00000555114 BEX3Q00994 111 aa18.33■□□□□ 0.52
NEDD1-207ENST00000555114 RAB30Q15771 203 aa18.33■□□□□ 0.52
NEDD1-207ENST00000555114 FSCN1Q16658 493 aaKnown RBP18.33■□□□□ 0.52
NEDD1-207ENST00000555114 PI4K2BQ8TCG2 481 aa18.33■□□□□ 0.52
NEDD1-207ENST00000555114 MSRAQ9UJ68 235 aa18.33■□□□□ 0.52
NEDD1-207ENST00000555114 Q9Y3F1 56 aa18.33■□□□□ 0.52
NEDD1-207ENST00000555114 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.32■□□□□ 0.52
NEDD1-207ENST00000555114 SOWAHBA6NEL2 793 aa18.32■□□□□ 0.52
NEDD1-207ENST00000555114 CD4P01730 458 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms