RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956		A0A1W2PQH9	124 aa		7.95	□□□□□ -1.14
PSMC6-208	ENST00000554956	MEIS1	O00470	390 aa		7.95	□□□□□ -1.14
PSMC6-208	ENST00000554956	SHOX	O15266	292 aa		7.95	□□□□□ -1.14
PSMC6-208	ENST00000554956	AUH	Q13825	339 aa	Known RBP	7.95	□□□□□ -1.14
PSMC6-208	ENST00000554956	CCDC144CP	Q8IYA2	1237 aa		7.95	□□□□□ -1.14
PSMC6-208	ENST00000554956	ADAMTS10	Q9H324	1103 aa		7.95	□□□□□ -1.14
PSMC6-208	ENST00000554956	FBXL21	Q9UKT6	434 aa		7.95	□□□□□ -1.14
PSMC6-208	ENST00000554956	PCDHB10	Q9UN67	800 aa		7.95	□□□□□ -1.14
PSMC6-208	ENST00000554956	CTNND2	Q9UQB3	1225 aa		7.95	□□□□□ -1.14
PSMC6-208	ENST00000554956	MRVI1	Q9Y6F6	885 aa		7.95	□□□□□ -1.14
PSMC6-208	ENST00000554956	GPATCH8	Q9UKJ3	1502 aa	Known RBP	7.94	□□□□□ -1.14
PSMC6-208	ENST00000554956	SIGLEC6	O43699	453 aa		7.94	□□□□□ -1.14
PSMC6-208	ENST00000554956	PPP2R5E	Q16537	467 aa		7.94	□□□□□ -1.14
PSMC6-208	ENST00000554956	OR6P1	Q8NGX9	317 aa		7.94	□□□□□ -1.14
PSMC6-208	ENST00000554956	SYTL5	Q8TDW5	730 aa	Predicted RBP	7.94	□□□□□ -1.14
PSMC6-208	ENST00000554956	TCTN2	Q96GX1	697 aa		7.94	□□□□□ -1.14
PSMC6-208	ENST00000554956	ZNF214	Q9UL59	606 aa	Predicted RBP	7.94	□□□□□ -1.14
PSMC6-208	ENST00000554956	PCDHB12	Q9Y5F1	795 aa		7.94	□□□□□ -1.14
PSMC6-208	ENST00000554956	ZNF644	Q9H582	1327 aa	Predicted RBP	7.94	□□□□□ -1.14
PSMC6-208	ENST00000554956	ABCC1	P33527	1531 aa		7.93	□□□□□ -1.14
PSMC6-208	ENST00000554956	HK2	P52789	917 aa		7.93	□□□□□ -1.14
PSMC6-208	ENST00000554956	TEK	Q02763	1124 aa		7.93	□□□□□ -1.14
PSMC6-208	ENST00000554956	ATG4D	Q86TL0	474 aa	Predicted RBP	7.93	□□□□□ -1.14
PSMC6-208	ENST00000554956	C7orf61	Q8IZ16	206 aa		7.93	□□□□□ -1.14
PSMC6-208	ENST00000554956	C19orf47	Q8N9M1	422 aa	Known RBP	7.93	□□□□□ -1.14
PSMC6-208	ENST00000554956	DAGLB	Q8NCG7	672 aa		7.93	□□□□□ -1.14
PSMC6-208	ENST00000554956	FLAD1	Q8NFF5	587 aa		7.93	□□□□□ -1.14
PSMC6-208	ENST00000554956	FOXP3	Q9BZS1	431 aa		7.93	□□□□□ -1.14
PSMC6-208	ENST00000554956	STRIP2	Q9ULQ0	834 aa		7.93	□□□□□ -1.14
PSMC6-208	ENST00000554956	ABCA6	Q8N139	1617 aa		7.92	□□□□□ -1.14
PSMC6-208	ENST00000554956	MYO5C	Q9NQX4	1742 aa		7.92	□□□□□ -1.14
PSMC6-208	ENST00000554956	CDC42BPB	Q9Y5S2	1711 aa		7.92	□□□□□ -1.14
PSMC6-208	ENST00000554956	ERVFC1	P60507	584 aa		7.92	□□□□□ -1.14
PSMC6-208	ENST00000554956	GNL2	Q13823	731 aa	Known RBP	7.92	□□□□□ -1.14
PSMC6-208	ENST00000554956	FYB2	Q5VWT5	728 aa		7.92	□□□□□ -1.14
PSMC6-208	ENST00000554956	USHBP1	Q8N6Y0	703 aa		7.92	□□□□□ -1.14
PSMC6-208	ENST00000554956	ENOX1	Q8TC92	643 aa	Known RBP	7.92	□□□□□ -1.14
PSMC6-208	ENST00000554956	CHST7	Q9NS84	486 aa		7.92	□□□□□ -1.14
PSMC6-208	ENST00000554956	TMEM59L	Q9UK28	342 aa		7.92	□□□□□ -1.14
PSMC6-208	ENST00000554956	CCDC18	Q5T9S5	1454 aa		7.92	□□□□□ -1.14
PSMC6-208	ENST00000554956	AGL	P35573	1532 aa		7.92	□□□□□ -1.14
PSMC6-208	ENST00000554956	FER1L4	A9Z1Z3	1794 aa		7.92	□□□□□ -1.14
PSMC6-208	ENST00000554956	FKTN	O75072	461 aa		7.91	□□□□□ -1.14
PSMC6-208	ENST00000554956	SSB	P05455	408 aa	Known RBP eCLIP	7.91	□□□□□ -1.14
PSMC6-208	ENST00000554956	FGR	P09769	529 aa		7.91	□□□□□ -1.14
PSMC6-208	ENST00000554956	DNAJA1	P31689	397 aa	Known RBP	7.91	□□□□□ -1.14
PSMC6-208	ENST00000554956	CTSK	P43235	329 aa		7.91	□□□□□ -1.14
PSMC6-208	ENST00000554956	GNPTAB	Q3T906	1256 aa		7.91	□□□□□ -1.14
PSMC6-208	ENST00000554956	VPS37D	Q86XT2	251 aa		7.91	□□□□□ -1.14
PSMC6-208	ENST00000554956	ZNF655	Q8N720	491 aa	Predicted RBP	7.91	□□□□□ -1.14
PSMC6-208	ENST00000554956	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	7.91	□□□□□ -1.14	8e-15	■■■□□ 15.8
PSMC6-208	ENST00000554956	CFDP1	Q9UEE9	299 aa	Predicted RBP	7.91	□□□□□ -1.14
PSMC6-208	ENST00000554956	SPAG9	O60271	1321 aa	Known RBP	7.91	□□□□□ -1.14
PSMC6-208	ENST00000554956	UHRF1BP1	Q6BDS2	1440 aa		7.91	□□□□□ -1.14
PSMC6-208	ENST00000554956	FYCO1	Q9BQS8	1478 aa		7.91	□□□□□ -1.14
PSMC6-208	ENST00000554956	RERE	Q9P2R6	1566 aa		7.91	□□□□□ -1.14
PSMC6-208	ENST00000554956	PREX2	Q70Z35	1606 aa		7.9	□□□□□ -1.14
PSMC6-208	ENST00000554956	SAMD9L	Q8IVG5	1584 aa		7.9	□□□□□ -1.14
PSMC6-208	ENST00000554956	ZMYM3	Q14202	1370 aa		7.9	□□□□□ -1.14
PSMC6-208	ENST00000554956	SMAD7	O15105	426 aa	Known RBP	7.9	□□□□□ -1.14
PSMC6-208	ENST00000554956	CBFA2T2	O43439	604 aa		7.9	□□□□□ -1.14
PSMC6-208	ENST00000554956	SYP	P08247	313 aa		7.9	□□□□□ -1.14
PSMC6-208	ENST00000554956	JUNB	P17275	347 aa	Predicted RBP	7.9	□□□□□ -1.14
PSMC6-208	ENST00000554956	GDNF	P39905	211 aa		7.9	□□□□□ -1.14
PSMC6-208	ENST00000554956	ARID5A	Q03989	594 aa		7.9	□□□□□ -1.14
PSMC6-208	ENST00000554956	BBS9	Q3SYG4	887 aa		7.9	□□□□□ -1.14
PSMC6-208	ENST00000554956	CRTC3	Q6UUV7	619 aa		7.9	□□□□□ -1.14
PSMC6-208	ENST00000554956	ZPBP2	Q6X784	338 aa		7.9	□□□□□ -1.14
PSMC6-208	ENST00000554956	MCF2L2	Q86YR7	1114 aa		7.9	□□□□□ -1.14
PSMC6-208	ENST00000554956	KLHL6	Q8WZ60	621 aa		7.9	□□□□□ -1.14
PSMC6-208	ENST00000554956	SMARCC1	Q92922	1105 aa	Predicted RBP	7.9	□□□□□ -1.14
PSMC6-208	ENST00000554956	BRF1	Q92994	677 aa		7.9	□□□□□ -1.14
PSMC6-208	ENST00000554956	GP6	Q9HCN6	339 aa		7.9	□□□□□ -1.14
PSMC6-208	ENST00000554956	EBF1	Q9UH73	591 aa		7.9	□□□□□ -1.14
PSMC6-208	ENST00000554956	TCFL5	Q9UL49	500 aa		7.9	□□□□□ -1.14
PSMC6-208	ENST00000554956	ZNF451	Q9Y4E5	1061 aa		7.9	□□□□□ -1.14
PSMC6-208	ENST00000554956	KIDINS220	Q9ULH0	1771 aa		7.89	□□□□□ -1.15
PSMC6-208	ENST00000554956	SYCP2	Q9BX26	1530 aa		7.89	□□□□□ -1.15
PSMC6-208	ENST00000554956	BIN1	O00499	593 aa		7.89	□□□□□ -1.15
PSMC6-208	ENST00000554956	ZGLP1	P0C6A0	271 aa		7.89	□□□□□ -1.15
PSMC6-208	ENST00000554956	ETFB	P38117	255 aa		7.89	□□□□□ -1.15
PSMC6-208	ENST00000554956	CASP7	P55210	303 aa		7.89	□□□□□ -1.15
PSMC6-208	ENST00000554956	ZNF445	P59923	1031 aa		7.89	□□□□□ -1.15
PSMC6-208	ENST00000554956	FAM168A	Q92567	244 aa		7.89	□□□□□ -1.15
PSMC6-208	ENST00000554956	PHAX	Q9H814	394 aa	Known RBP	7.89	□□□□□ -1.15
PSMC6-208	ENST00000554956	SLC12A7	Q9Y666	1083 aa		7.89	□□□□□ -1.15
PSMC6-208	ENST00000554956	STRC	Q7RTU9	1775 aa		7.89	□□□□□ -1.15
PSMC6-208	ENST00000554956	KIAA1107	Q9UPP5	1409 aa		7.88	□□□□□ -1.15
PSMC6-208	ENST00000554956	CCNB3	Q8WWL7	1395 aa		7.88	□□□□□ -1.15
PSMC6-208	ENST00000554956	TMEM82	A0PJX8	343 aa		7.88	□□□□□ -1.15
PSMC6-208	ENST00000554956	RPL10	P27635	214 aa	Known RBP	7.88	□□□□□ -1.15
PSMC6-208	ENST00000554956	TRHR	P34981	398 aa	Predicted RBP	7.88	□□□□□ -1.15
PSMC6-208	ENST00000554956	SLC7A5	Q01650	507 aa		7.88	□□□□□ -1.15
PSMC6-208	ENST00000554956	GGT6	Q6P531	493 aa		7.88	□□□□□ -1.15
PSMC6-208	ENST00000554956	RNF111	Q6ZNA4	994 aa		7.88	□□□□□ -1.15
PSMC6-208	ENST00000554956	WAPL	Q7Z5K2	1190 aa		7.88	□□□□□ -1.15
PSMC6-208	ENST00000554956	HAUS7	Q99871	368 aa		7.88	□□□□□ -1.15
PSMC6-208	ENST00000554956	DSCC1	Q9BVC3	393 aa		7.88	□□□□□ -1.15
PSMC6-208	ENST00000554956	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	7.88	□□□□□ -1.15
PSMC6-208	ENST00000554956	MBD5	Q9P267	1494 aa		7.87	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 15 ms