RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 PRAMEF19Q5SWL8 479 aa14.56□□□□□ -0.08
SHMT2-214ENST00000554604 ANKRD35Q8N283 1001 aa14.56□□□□□ -0.08
SHMT2-214ENST00000554604 IL27Q8NEV9 243 aa14.56□□□□□ -0.08
SHMT2-214ENST00000554604 DCAF4Q8WV16 495 aa14.56□□□□□ -0.08
SHMT2-214ENST00000554604 RUFY2Q8WXA3 655 aa14.56□□□□□ -0.08
SHMT2-214ENST00000554604 IL17RAQ96F46 866 aa14.56□□□□□ -0.08
SHMT2-214ENST00000554604 TMEM47Q9BQJ4 181 aa14.56□□□□□ -0.08
SHMT2-214ENST00000554604 TINF2Q9BSI4 451 aa14.56□□□□□ -0.08
SHMT2-214ENST00000554604 HOMER2Q9NSB8 354 aa14.56□□□□□ -0.08
SHMT2-214ENST00000554604 DIS3Q9Y2L1 958 aaKnown RBP14.56□□□□□ -0.08
SHMT2-214ENST00000554604 MYH6P13533 1939 aa14.55□□□□□ -0.08
SHMT2-214ENST00000554604 K7ELQ4 463 aaPredicted RBP14.55□□□□□ -0.08
SHMT2-214ENST00000554604 SEPT4O43236 478 aa14.55□□□□□ -0.08
SHMT2-214ENST00000554604 PLA2G6O60733 806 aa14.55□□□□□ -0.08
SHMT2-214ENST00000554604 IGHA2P01877 340 aa14.55□□□□□ -0.08
SHMT2-214ENST00000554604 NOVP48745 357 aa14.55□□□□□ -0.08
SHMT2-214ENST00000554604 MNX1P50219 401 aaPredicted RBP14.55□□□□□ -0.08
SHMT2-214ENST00000554604 ZNF792Q3KQV3 632 aa14.55□□□□□ -0.08
SHMT2-214ENST00000554604 CHST13Q8NET6 341 aa14.55□□□□□ -0.08
SHMT2-214ENST00000554604 TTC14Q96N46 770 aa14.55□□□□□ -0.08
SHMT2-214ENST00000554604 NEDD4P46934 1319 aa14.55□□□□□ -0.08
SHMT2-214ENST00000554604 MYCNP04198 464 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-214ENST00000554604 NT5C2P49902 561 aa14.54□□□□□ -0.08
SHMT2-214ENST00000554604 ANAPC15P60006 121 aa14.54□□□□□ -0.08
SHMT2-214ENST00000554604 ANO1Q5XXA6 986 aa14.54□□□□□ -0.08
SHMT2-214ENST00000554604 CCDC174Q6PII3 467 aa14.54□□□□□ -0.08
SHMT2-214ENST00000554604 RASGRP2Q7LDG7 609 aa14.54□□□□□ -0.08
SHMT2-214ENST00000554604 IQCA1Q86XH1 822 aa14.54□□□□□ -0.08
SHMT2-214ENST00000554604 C7orf61Q8IZ16 206 aa14.54□□□□□ -0.08
SHMT2-214ENST00000554604 ARRDC4Q8NCT1 418 aa14.54□□□□□ -0.08
SHMT2-214ENST00000554604 SLKQ9H2G2 1235 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-214ENST00000554604 CHMP5Q9NZZ3 219 aa14.54□□□□□ -0.08
SHMT2-214ENST00000554604 NRBP1Q9UHY1 535 aa14.54□□□□□ -0.08
SHMT2-214ENST00000554604 PRR12Q9ULL5 1215 aa14.54□□□□□ -0.08
SHMT2-214ENST00000554604 COLQQ9Y215 455 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-214ENST00000554604 CNPY2Q9Y2B0 182 aa14.54□□□□□ -0.08
SHMT2-214ENST00000554604 PFASO15067 1338 aa14.53□□□□□ -0.08
SHMT2-214ENST00000554604 RAD50Q92878 1312 aa14.53□□□□□ -0.08
SHMT2-214ENST00000554604 SGSM2O43147 1006 aa14.53□□□□□ -0.08
SHMT2-214ENST00000554604 KDM4AO75164 1064 aa14.53□□□□□ -0.08
SHMT2-214ENST00000554604 ALAS1P13196 640 aa14.53□□□□□ -0.08
SHMT2-214ENST00000554604 CCDC178Q5BJE1 867 aa14.53□□□□□ -0.08
SHMT2-214ENST00000554604 HABP4Q5JVS0 413 aaKnown RBP14.53□□□□□ -0.08
SHMT2-214ENST00000554604 MSL3Q8N5Y2 521 aaKnown RBP14.53□□□□□ -0.08
SHMT2-214ENST00000554604 AGBL1Q96MI9 1066 aa14.53□□□□□ -0.08
SHMT2-214ENST00000554604 ZKSCAN3Q9BRR0 538 aa14.53□□□□□ -0.08
SHMT2-214ENST00000554604 ACAD9Q9H845 621 aa14.53□□□□□ -0.08
SHMT2-214ENST00000554604 GPCPD1Q9NPB8 672 aa14.53□□□□□ -0.08
SHMT2-214ENST00000554604 RNF146Q9NTX7 359 aa14.53□□□□□ -0.08
SHMT2-214ENST00000554604 RANBP2P49792 3224 aaKnown RBP14.52□□□□□ -0.08
SHMT2-214ENST00000554604 FRMPD2Q68DX3 1309 aaPredicted RBP14.52□□□□□ -0.08
SHMT2-214ENST00000554604 DNAJC25-GNG10A0A024R161 153 aa14.52□□□□□ -0.09
SHMT2-214ENST00000554604 B4E1Z4 1266 aa14.52□□□□□ -0.09
SHMT2-214ENST00000554604 KBTBD13C9JR72 458 aa14.52□□□□□ -0.09
SHMT2-214ENST00000554604 DNM1LO00429 736 aa14.52□□□□□ -0.09
SHMT2-214ENST00000554604 RARBP10826 455 aa14.52□□□□□ -0.09
SHMT2-214ENST00000554604 COL6A1P12109 1028 aa14.52□□□□□ -0.09
SHMT2-214ENST00000554604 DDIT3P35638 169 aa14.52□□□□□ -0.09
SHMT2-214ENST00000554604 SLC16A2P36021 539 aa14.52□□□□□ -0.09
SHMT2-214ENST00000554604 SNAP25P60880 206 aa14.52□□□□□ -0.09
SHMT2-214ENST00000554604 TKFCQ3LXA3 575 aa14.52□□□□□ -0.09
SHMT2-214ENST00000554604 CHRDL2Q6WN34 429 aa14.52□□□□□ -0.09
SHMT2-214ENST00000554604 TRERF1Q96PN7 1200 aa14.52□□□□□ -0.09
SHMT2-214ENST00000554604 KRT23Q9C075 422 aa14.52□□□□□ -0.09
SHMT2-214ENST00000554604 SENP6Q9GZR1 1112 aaPredicted RBP14.52□□□□□ -0.09
SHMT2-214ENST00000554604 CNNM2Q9H8M5 875 aa14.52□□□□□ -0.09
SHMT2-214ENST00000554604 CCPG1Q9ULG6 757 aa14.52□□□□□ -0.09
SHMT2-214ENST00000554604 CIZ1Q9ULV3 898 aaPredicted RBP14.52□□□□□ -0.09
SHMT2-214ENST00000554604 ZNF536O15090 1300 aa14.51□□□□□ -0.09
SHMT2-214ENST00000554604 SYNGAP1Q96PV0 1343 aa14.51□□□□□ -0.09
SHMT2-214ENST00000554604 ST18O60284 1047 aa14.51□□□□□ -0.09
SHMT2-214ENST00000554604 CD2BP2O95400 341 aaKnown RBP14.51□□□□□ -0.09
SHMT2-214ENST00000554604 PDHBP11177 359 aa14.51□□□□□ -0.09
SHMT2-214ENST00000554604 GJC2Q5T442 439 aaPredicted RBP14.51□□□□□ -0.09
SHMT2-214ENST00000554604 SYDE2Q5VT97 1194 aa14.51□□□□□ -0.09
SHMT2-214ENST00000554604 TTBK2Q6IQ55 1244 aa14.51□□□□□ -0.09
SHMT2-214ENST00000554604 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.51□□□□□ -0.09
SHMT2-214ENST00000554604 ZNF467Q7Z7K2 595 aaPredicted RBP14.51□□□□□ -0.09
SHMT2-214ENST00000554604 DGKHQ86XP1 1220 aa14.51□□□□□ -0.09
SHMT2-214ENST00000554604 UBAC1Q9BSL1 405 aa14.51□□□□□ -0.09
SHMT2-214ENST00000554604 IL25Q9H293 177 aa14.51□□□□□ -0.09
SHMT2-214ENST00000554604 ANO2Q9NQ90 1003 aa14.51□□□□□ -0.09
SHMT2-214ENST00000554604 POTEB2H3BUK9 544 aa14.5□□□□□ -0.09
SHMT2-214ENST00000554604 ICAM1P05362 532 aa14.5□□□□□ -0.09
SHMT2-214ENST00000554604 AKR1A1P14550 325 aa14.5□□□□□ -0.09
SHMT2-214ENST00000554604 TAL1P17542 331 aaPredicted RBP14.5□□□□□ -0.09
SHMT2-214ENST00000554604 ZNF543Q08ER8 600 aa14.5□□□□□ -0.09
SHMT2-214ENST00000554604 MAMDC4Q6UXC1 1216 aa14.5□□□□□ -0.09
SHMT2-214ENST00000554604 BTNL9Q6UXG8 535 aa14.5□□□□□ -0.09
SHMT2-214ENST00000554604 PNMA1Q8ND90 353 aa14.5□□□□□ -0.09
SHMT2-214ENST00000554604 ZSCAN10Q96SZ4 725 aaPredicted RBP14.5□□□□□ -0.09
SHMT2-214ENST00000554604 KAT14Q9H8E8 782 aa14.5□□□□□ -0.09
SHMT2-214ENST00000554604 A1CFQ9NQ94 594 aaKnown RBP14.5□□□□□ -0.09
SHMT2-214ENST00000554604 XPNPEP3Q9NQH7 507 aa14.5□□□□□ -0.09
SHMT2-214ENST00000554604 ZSWIM5Q9P217 1185 aa14.5□□□□□ -0.09
SHMT2-214ENST00000554604 ZHX1Q9UKY1 873 aaPredicted RBP14.5□□□□□ -0.09
SHMT2-214ENST00000554604 ZMYND8Q9ULU4 1186 aaPredicted RBP14.5□□□□□ -0.09
SHMT2-214ENST00000554604 HSPA4P34932 840 aa14.49□□□□□ -0.09
SHMT2-214ENST00000554604 ATN1P54259 1190 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-214ENST00000554604 CNTN2Q02246 1040 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 903.6 ms