RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 DCAF4Q8WV16 495 aa13.13□□□□□ -0.31
ABCD4-221ENST00000554453 FGD4Q96M96 766 aa13.13□□□□□ -0.31
ABCD4-221ENST00000554453 AGBL1Q96MI9 1066 aa13.13□□□□□ -0.31
ABCD4-221ENST00000554453 TMEM47Q9BQJ4 181 aa13.13□□□□□ -0.31
ABCD4-221ENST00000554453 TSEN34Q9BSV6 310 aaKnown RBP13.13□□□□□ -0.31
ABCD4-221ENST00000554453 UBE2OQ9C0C9 1292 aaKnown RBP13.13□□□□□ -0.31
ABCD4-221ENST00000554453 ABHD16BQ9H3Z7 469 aa13.13□□□□□ -0.31
ABCD4-221ENST00000554453 XPNPEP3Q9NQH7 507 aa13.13□□□□□ -0.31
ABCD4-221ENST00000554453 TOMM22Q9NS69 142 aa13.13□□□□□ -0.31
ABCD4-221ENST00000554453 PRR12Q9ULL5 1215 aa13.13□□□□□ -0.31
ABCD4-221ENST00000554453 PHF24Q9UPV7 400 aa13.13□□□□□ -0.31
ABCD4-221ENST00000554453 HIP1O00291 1037 aa13.12□□□□□ -0.31
ABCD4-221ENST00000554453 PGK1P00558 417 aa13.12□□□□□ -0.31
ABCD4-221ENST00000554453 HAND2P61296 217 aa13.12□□□□□ -0.31
ABCD4-221ENST00000554453 IKQ13123 557 aaPredicted RBP13.12□□□□□ -0.31
ABCD4-221ENST00000554453 ACVR2BQ13705 512 aa13.12□□□□□ -0.31
ABCD4-221ENST00000554453 LRIT3Q3SXY7 679 aa13.12□□□□□ -0.31
ABCD4-221ENST00000554453 RRP12Q5JTH9 1297 aaKnown RBP13.12□□□□□ -0.31
ABCD4-221ENST00000554453 FAM133AQ8N9E0 248 aa13.12□□□□□ -0.31
ABCD4-221ENST00000554453 CHMP4CQ96CF2 233 aa13.12□□□□□ -0.31
ABCD4-221ENST00000554453 TRERF1Q96PN7 1200 aa13.12□□□□□ -0.31
ABCD4-221ENST00000554453 ACAD9Q9H845 621 aa13.12□□□□□ -0.31
ABCD4-221ENST00000554453 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.12□□□□□ -0.31
ABCD4-221ENST00000554453 ISY1Q9ULR0 285 aaKnown RBP13.12□□□□□ -0.31
ABCD4-221ENST00000554453 MYO9BQ13459 2157 aa13.12□□□□□ -0.31
ABCD4-221ENST00000554453 POTEB2H3BUK9 544 aa13.11□□□□□ -0.31
ABCD4-221ENST00000554453 SOX1O00570 391 aaPredicted RBP13.11□□□□□ -0.31
ABCD4-221ENST00000554453 DUSP11O75319 330 aaKnown RBP13.11□□□□□ -0.31
ABCD4-221ENST00000554453 MYCNP04198 464 aaPredicted RBP13.11□□□□□ -0.31
ABCD4-221ENST00000554453 NT5C2P49902 561 aa13.11□□□□□ -0.31
ABCD4-221ENST00000554453 CNTN2Q02246 1040 aa13.11□□□□□ -0.31
ABCD4-221ENST00000554453 TTBK2Q6IQ55 1244 aa13.11□□□□□ -0.31
ABCD4-221ENST00000554453 GPR153Q6NV75 609 aa13.11□□□□□ -0.31
ABCD4-221ENST00000554453 CWC27Q6UX04 472 aaKnown RBP13.11□□□□□ -0.31
ABCD4-221ENST00000554453 TDHQ8IZJ6 230 aa13.11□□□□□ -0.31
ABCD4-221ENST00000554453 KLHDC9Q8NEP7 349 aa13.11□□□□□ -0.31
ABCD4-221ENST00000554453 FERMT2Q96AC1 680 aa13.11□□□□□ -0.31
ABCD4-221ENST00000554453 RNF41Q9H4P4 317 aaPredicted RBP13.11□□□□□ -0.31
ABCD4-221ENST00000554453 RNF146Q9NTX7 359 aa13.11□□□□□ -0.31
ABCD4-221ENST00000554453 RANBP2P49792 3224 aaKnown RBP13.11□□□□□ -0.31
ABCD4-221ENST00000554453 ZNF213O14771 459 aa13.1□□□□□ -0.31
ABCD4-221ENST00000554453 ADAMTS4O75173 837 aa13.1□□□□□ -0.31
ABCD4-221ENST00000554453 ALAS1P13196 640 aa13.1□□□□□ -0.31
ABCD4-221ENST00000554453 SNAP25P60880 206 aa13.1□□□□□ -0.31
ABCD4-221ENST00000554453 MDM2Q00987 491 aaPredicted RBP13.1□□□□□ -0.31
ABCD4-221ENST00000554453 CCDC178Q5BJE1 867 aa13.1□□□□□ -0.31
ABCD4-221ENST00000554453 CCSAPQ6IQ19 270 aaPredicted RBP13.1□□□□□ -0.31
ABCD4-221ENST00000554453 ARMCX2Q7L311 632 aa13.1□□□□□ -0.31
ABCD4-221ENST00000554453 DGKHQ86XP1 1220 aa13.1□□□□□ -0.31
ABCD4-221ENST00000554453 LBHD1Q9BQE6 289 aaPredicted RBP13.1□□□□□ -0.31
ABCD4-221ENST00000554453 DSCC1Q9BVC3 393 aa13.1□□□□□ -0.31
ABCD4-221ENST00000554453 RANBP17Q9H2T7 1088 aaKnown RBP13.1□□□□□ -0.31
ABCD4-221ENST00000554453 A1CFQ9NQ94 594 aaKnown RBP13.1□□□□□ -0.31
ABCD4-221ENST00000554453 HOMER2Q9NSB8 354 aa13.1□□□□□ -0.31
ABCD4-221ENST00000554453 DIAPH3Q9NSV4 1193 aa13.1□□□□□ -0.31
ABCD4-221ENST00000554453 PRKAG2Q9UGJ0 569 aa13.1□□□□□ -0.31
ABCD4-221ENST00000554453 ZHX1Q9UKY1 873 aaPredicted RBP13.1□□□□□ -0.31
ABCD4-221ENST00000554453 ATP11BQ9Y2G3 1177 aa13.1□□□□□ -0.31
ABCD4-221ENST00000554453 SOWAHBA6NEL2 793 aa13.09□□□□□ -0.31
ABCD4-221ENST00000554453 ASB14A6NK59 587 aa13.09□□□□□ -0.31
ABCD4-221ENST00000554453 ICAM1P05362 532 aa13.09□□□□□ -0.31
ABCD4-221ENST00000554453 SLC16A2P36021 539 aa13.09□□□□□ -0.31
ABCD4-221ENST00000554453 NKX3-2P78367 333 aa13.09□□□□□ -0.31
ABCD4-221ENST00000554453 TLE2Q04725 743 aa13.09□□□□□ -0.31
ABCD4-221ENST00000554453 KCNA10Q16322 511 aa13.09□□□□□ -0.31
ABCD4-221ENST00000554453 CCDC96Q2M329 555 aa13.09□□□□□ -0.31
ABCD4-221ENST00000554453 CCDC144BQ3MJ40 725 aa13.09□□□□□ -0.31
ABCD4-221ENST00000554453 TRIM60Q495X7 471 aa13.09□□□□□ -0.31
ABCD4-221ENST00000554453 MUM1L1Q5H9M0 696 aa13.09□□□□□ -0.31
ABCD4-221ENST00000554453 SYDE2Q5VT97 1194 aa13.09□□□□□ -0.31
ABCD4-221ENST00000554453 CCDC174Q6PII3 467 aa13.09□□□□□ -0.31
ABCD4-221ENST00000554453 TBC1D10CQ8IV04 446 aa13.09□□□□□ -0.31
ABCD4-221ENST00000554453 CCDC144CPQ8IYA2 1237 aa13.09□□□□□ -0.31
ABCD4-221ENST00000554453 ANKS1AQ92625 1134 aa13.09□□□□□ -0.31
ABCD4-221ENST00000554453 ESR2Q92731 530 aa13.09□□□□□ -0.31
ABCD4-221ENST00000554453 LRCH3Q96II8 777 aa13.09□□□□□ -0.31
ABCD4-221ENST00000554453 KATNBL1Q9H079 304 aa13.09□□□□□ -0.31
ABCD4-221ENST00000554453 PNMA2Q9UL42 364 aa13.09□□□□□ -0.31
ABCD4-221ENST00000554453 MTMR7Q9Y216 660 aa13.09□□□□□ -0.31
ABCD4-221ENST00000554453 MOXD2PA6NHM9 499 aa13.08□□□□□ -0.32
ABCD4-221ENST00000554453 SNHG28P0DPA3 235 aa13.08□□□□□ -0.32
ABCD4-221ENST00000554453 PDHBP11177 359 aa13.08□□□□□ -0.32
ABCD4-221ENST00000554453 CST5P28325 142 aaPredicted RBP13.08□□□□□ -0.32
ABCD4-221ENST00000554453 ACLYP53396 1101 aa13.08□□□□□ -0.32
ABCD4-221ENST00000554453 GJA9P57773 515 aa13.08□□□□□ -0.32
ABCD4-221ENST00000554453 RASGRP2Q7LDG7 609 aa13.08□□□□□ -0.32
ABCD4-221ENST00000554453 PCSK9Q8NBP7 692 aaKnown RBP13.08□□□□□ -0.32
ABCD4-221ENST00000554453 NUP133Q8WUM0 1156 aa13.08□□□□□ -0.32
ABCD4-221ENST00000554453 TOX2Q96NM4 488 aa13.08□□□□□ -0.32
ABCD4-221ENST00000554453 UPF3AQ9H1J1 476 aaKnown RBP13.08□□□□□ -0.32
ABCD4-221ENST00000554453 GPCPD1Q9NPB8 672 aa13.08□□□□□ -0.32
ABCD4-221ENST00000554453 CYP39A1Q9NYL5 469 aa13.08□□□□□ -0.32
ABCD4-221ENST00000554453 CTNNA3Q9UI47 895 aa13.08□□□□□ -0.32
ABCD4-221ENST00000554453 CCPG1Q9ULG6 757 aa13.08□□□□□ -0.32
ABCD4-221ENST00000554453 A0A1W2PQ45 241 aaPredicted RBP13.07□□□□□ -0.32
ABCD4-221ENST00000554453 A0A1W2PQY0 241 aa13.07□□□□□ -0.32
ABCD4-221ENST00000554453 TRIM43BA6NCK2 446 aa13.07□□□□□ -0.32
ABCD4-221ENST00000554453 PDE4AP27815 886 aa13.07□□□□□ -0.32
ABCD4-221ENST00000554453 ZNF543Q08ER8 600 aa13.07□□□□□ -0.32
ABCD4-221ENST00000554453 IQSEC1Q6DN90 963 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms