RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 TMEM82A0PJX8 343 aa7.75□□□□□ -1.17
SCFD1-211ENST00000554437 AGRPO00253 132 aa7.75□□□□□ -1.17
SCFD1-211ENST00000554437 PDPK1O15530 556 aa7.75□□□□□ -1.17
SCFD1-211ENST00000554437 ZGLP1P0C6A0 271 aa7.75□□□□□ -1.17
SCFD1-211ENST00000554437 ENDOUP21128 410 aaKnown RBP7.75□□□□□ -1.17
SCFD1-211ENST00000554437 GRB10Q13322 594 aa7.75□□□□□ -1.17
SCFD1-211ENST00000554437 DPY19L1Q2PZI1 675 aa7.75□□□□□ -1.17
SCFD1-211ENST00000554437 FCRL3Q96P31 734 aaPredicted RBP7.75□□□□□ -1.17
SCFD1-211ENST00000554437 CCDC113Q9H0I3 377 aa7.75□□□□□ -1.17
SCFD1-211ENST00000554437 ADGRE2Q9UHX3 823 aa7.75□□□□□ -1.17
SCFD1-211ENST00000554437 ITGAVP06756 1048 aa7.74□□□□□ -1.17
SCFD1-211ENST00000554437 DUSP4Q13115 394 aa7.74□□□□□ -1.17
SCFD1-211ENST00000554437 RTP2Q5QGT7 225 aa7.74□□□□□ -1.17
SCFD1-211ENST00000554437 ST13P5Q8NFI4 369 aaPredicted RBP7.74□□□□□ -1.17
SCFD1-211ENST00000554437 SRPK1Q96SB4 655 aaKnown RBP7.74□□□□□ -1.17
SCFD1-211ENST00000554437 KRTAP4-9Q9BYQ8 210 aa7.74□□□□□ -1.17
SCFD1-211ENST00000554437 OSBPL2Q9H1P3 480 aa7.74□□□□□ -1.17
SCFD1-211ENST00000554437 GPR55Q9Y2T6 319 aaPredicted RBP7.74□□□□□ -1.17
SCFD1-211ENST00000554437 ZNF281Q9Y2X9 895 aa7.74□□□□□ -1.17
SCFD1-211ENST00000554437 STXBP3O00186 592 aa7.73□□□□□ -1.17
SCFD1-211ENST00000554437 IFNGR1P15260 489 aa7.73□□□□□ -1.17
SCFD1-211ENST00000554437 GDNFP39905 211 aa7.73□□□□□ -1.17
SCFD1-211ENST00000554437 IRAK1P51617 712 aa7.73□□□□□ -1.17
SCFD1-211ENST00000554437 RASGRF1Q13972 1273 aa7.73□□□□□ -1.17
SCFD1-211ENST00000554437 MTERF2Q49AM1 385 aa7.73□□□□□ -1.17
SCFD1-211ENST00000554437 CBLL1Q75N03 491 aa7.73□□□□□ -1.17
SCFD1-211ENST00000554437 ZNF227Q86WZ6 799 aa7.73□□□□□ -1.17
SCFD1-211ENST00000554437 TRIM59Q8IWR1 403 aa7.73□□□□□ -1.17
SCFD1-211ENST00000554437 NAT16Q8N8M0 369 aa7.73□□□□□ -1.17
SCFD1-211ENST00000554437 MRGPRX3Q96LB0 322 aa7.73□□□□□ -1.17
SCFD1-211ENST00000554437 DEPDC7Q96QD5 511 aa7.73□□□□□ -1.17
SCFD1-211ENST00000554437 LNPKQ9C0E8 428 aa7.73□□□□□ -1.17
SCFD1-211ENST00000554437 C19orf73Q9NVV2 129 aa7.73□□□□□ -1.17
SCFD1-211ENST00000554437 CTNND2Q9UQB3 1225 aa7.73□□□□□ -1.17
SCFD1-211ENST00000554437 IQCA1LA6NCM1 817 aa7.72□□□□□ -1.17
SCFD1-211ENST00000554437 AURKAO14965 403 aa7.72□□□□□ -1.17
SCFD1-211ENST00000554437 YBX3P16989 372 aaKnown RBP eCLIP7.72□□□□□ -1.176e-10■□□□□ 9.8
SCFD1-211ENST00000554437 IFRD2Q12894 506 aaPredicted RBP7.72□□□□□ -1.17
SCFD1-211ENST00000554437 RASA3Q14644 834 aa7.72□□□□□ -1.17
SCFD1-211ENST00000554437 GTF2IRD2BQ6EKJ0 949 aa7.72□□□□□ -1.17
SCFD1-211ENST00000554437 GTF2IRD2Q86UP8 949 aa7.72□□□□□ -1.17
SCFD1-211ENST00000554437 OXR1Q8N573 874 aa7.72□□□□□ -1.17
SCFD1-211ENST00000554437 LINC01599Q8WXQ3 324 aa7.72□□□□□ -1.17
SCFD1-211ENST00000554437 MKL1Q969V6 931 aa7.72□□□□□ -1.17
SCFD1-211ENST00000554437 MAP6Q96JE9 813 aa7.72□□□□□ -1.17
SCFD1-211ENST00000554437 FCRL2Q96LA5 508 aaPredicted RBP7.72□□□□□ -1.17
SCFD1-211ENST00000554437 MCMBPQ9BTE3 642 aa7.72□□□□□ -1.17
SCFD1-211ENST00000554437 SNTG2Q9NY99 539 aa7.72□□□□□ -1.17
SCFD1-211ENST00000554437 EBF1Q9UH73 591 aa7.72□□□□□ -1.17
SCFD1-211ENST00000554437 FAM221BA6H8Z2 402 aa7.71□□□□□ -1.18
SCFD1-211ENST00000554437 TBX1O43435 398 aa7.71□□□□□ -1.18
SCFD1-211ENST00000554437 RAC2P15153 192 aa7.71□□□□□ -1.18
SCFD1-211ENST00000554437 BMS1Q14692 1282 aaKnown RBP7.71□□□□□ -1.18
SCFD1-211ENST00000554437 LRP10Q7Z4F1 713 aa7.71□□□□□ -1.18
SCFD1-211ENST00000554437 SPPL2CQ8IUH8 684 aa7.71□□□□□ -1.18
SCFD1-211ENST00000554437 ANKS4BQ8N8V4 417 aa7.71□□□□□ -1.18
SCFD1-211ENST00000554437 PDZD8Q8NEN9 1154 aa7.71□□□□□ -1.18
SCFD1-211ENST00000554437 BTN2A2Q8WVV5 523 aa7.71□□□□□ -1.18
SCFD1-211ENST00000554437 G6PC3Q9BUM1 346 aa7.71□□□□□ -1.18
SCFD1-211ENST00000554437 ZSWIM4Q9H7M6 989 aa7.71□□□□□ -1.18
SCFD1-211ENST00000554437 ERVK13-1Q9NX77 482 aa7.71□□□□□ -1.18
SCFD1-211ENST00000554437 PFDN2Q9UHV9 154 aa7.71□□□□□ -1.18
SCFD1-211ENST00000554437 BACE2Q9Y5Z0 518 aa7.71□□□□□ -1.18
SCFD1-211ENST00000554437 A0A1W2PQU0 124 aa7.7□□□□□ -1.18
SCFD1-211ENST00000554437 C2orf71A6NGG8 1288 aa7.7□□□□□ -1.18
SCFD1-211ENST00000554437 TXKP42681 527 aa7.7□□□□□ -1.18
SCFD1-211ENST00000554437 AFMP43652 599 aa7.7□□□□□ -1.18
SCFD1-211ENST00000554437 SEPHS1P49903 392 aa7.7□□□□□ -1.18
SCFD1-211ENST00000554437 ERVFC1P60507 584 aa7.7□□□□□ -1.18
SCFD1-211ENST00000554437 CCDC144BQ3MJ40 725 aa7.7□□□□□ -1.18
SCFD1-211ENST00000554437 SPATC1Q76KD6 591 aa7.7□□□□□ -1.18
SCFD1-211ENST00000554437 ATG4DQ86TL0 474 aaPredicted RBP7.7□□□□□ -1.18
SCFD1-211ENST00000554437 FLAD1Q8NFF5 587 aa7.7□□□□□ -1.18
SCFD1-211ENST00000554437 ZNF669Q96BR6 464 aaPredicted RBP7.7□□□□□ -1.18
SCFD1-211ENST00000554437 SGSM3Q96HU1 749 aa7.7□□□□□ -1.18
SCFD1-211ENST00000554437 CWC22Q9HCG8 908 aaKnown RBP7.7□□□□□ -1.18
SCFD1-211ENST00000554437 TNFRSF10DQ9UBN6 386 aa7.7□□□□□ -1.18
SCFD1-211ENST00000554437 CDK11AQ9UQ88 783 aaPredicted RBP7.7□□□□□ -1.18
SCFD1-211ENST00000554437 FITM1A5D6W6 292 aa7.69□□□□□ -1.18
SCFD1-211ENST00000554437 BIN1O00499 593 aa7.69□□□□□ -1.18
SCFD1-211ENST00000554437 FGF10O15520 208 aaPredicted RBP7.69□□□□□ -1.18
SCFD1-211ENST00000554437 PAX4O43316 350 aa7.69□□□□□ -1.18
SCFD1-211ENST00000554437 USP2O75604 605 aaPredicted RBP7.69□□□□□ -1.18
SCFD1-211ENST00000554437 KIR2DL1P43626 348 aaPredicted RBP7.69□□□□□ -1.18
SCFD1-211ENST00000554437 KIR2DL2P43627 348 aaPredicted RBP7.69□□□□□ -1.18
SCFD1-211ENST00000554437 PPP2R2AP63151 447 aa7.69□□□□□ -1.18
SCFD1-211ENST00000554437 CHRNEQ04844 493 aa7.69□□□□□ -1.18
SCFD1-211ENST00000554437 SSRP1Q08945 709 aaKnown RBP7.69□□□□□ -1.18
SCFD1-211ENST00000554437 SCRN1Q12765 414 aa7.69□□□□□ -1.18
SCFD1-211ENST00000554437 SLC14A2Q15849 920 aa7.69□□□□□ -1.18
SCFD1-211ENST00000554437 NFE2L2Q16236 605 aa7.69□□□□□ -1.18
SCFD1-211ENST00000554437 EEF1DP3Q658K8 133 aa7.69□□□□□ -1.18
SCFD1-211ENST00000554437 RCSD1Q6JBY9 416 aa7.69□□□□□ -1.18
SCFD1-211ENST00000554437 CEP128Q6ZU80 1094 aa7.69□□□□□ -1.18
SCFD1-211ENST00000554437 DPH6Q7L8W6 267 aa7.69□□□□□ -1.18
SCFD1-211ENST00000554437 KSR1Q8IVT5 923 aa7.69□□□□□ -1.18
SCFD1-211ENST00000554437 LRRC47Q8N1G4 583 aaKnown RBP7.69□□□□□ -1.18
SCFD1-211ENST00000554437 MYLIPQ8WY64 445 aa7.69□□□□□ -1.18
SCFD1-211ENST00000554437 HHIPL1Q96JK4 782 aa7.69□□□□□ -1.18
SCFD1-211ENST00000554437 KRTAP4-2Q9BYR5 136 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms