RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 CARS2Q9HA77 564 aaKnown RBP4.66□□□□□ -1.66
SLIRP-202ENST00000553981 FBRSQ9HAH7 460 aa4.66□□□□□ -1.66
SLIRP-202ENST00000553981 C19orf73Q9NVV2 129 aa4.66□□□□□ -1.66
SLIRP-202ENST00000553981 PIK3C2AO00443 1686 aa4.66□□□□□ -1.66
SLIRP-202ENST00000553981 SLIT3O75094 1523 aa4.66□□□□□ -1.66
SLIRP-202ENST00000553981 CPDO75976 1380 aa4.65□□□□□ -1.66
SLIRP-202ENST00000553981 GPRASP1Q5JY77 1395 aa4.65□□□□□ -1.66
SLIRP-202ENST00000553981 PRAMEF27A3QJZ7 478 aa4.65□□□□□ -1.67
SLIRP-202ENST00000553981 GCP02774 474 aa4.65□□□□□ -1.67
SLIRP-202ENST00000553981 GLI1P08151 1106 aa4.65□□□□□ -1.67
SLIRP-202ENST00000553981 CELA3AP09093 270 aa4.65□□□□□ -1.67
SLIRP-202ENST00000553981 CFPP27918 469 aa4.65□□□□□ -1.67
SLIRP-202ENST00000553981 RAP1GAPP47736 663 aa4.65□□□□□ -1.67
SLIRP-202ENST00000553981 PTPN11Q06124 597 aaPredicted RBP4.65□□□□□ -1.67
SLIRP-202ENST00000553981 PDE4CQ08493 712 aa4.65□□□□□ -1.67
SLIRP-202ENST00000553981 SCARA3Q6AZY7 606 aa4.65□□□□□ -1.67
SLIRP-202ENST00000553981 LRFN4Q6PJG9 635 aa4.65□□□□□ -1.67
SLIRP-202ENST00000553981 PRR23BQ6ZRT6 265 aa4.65□□□□□ -1.67
SLIRP-202ENST00000553981 C22orf34Q6ZV56 151 aa4.65□□□□□ -1.67
SLIRP-202ENST00000553981 CYFIP1Q7L576 1253 aa4.65□□□□□ -1.67
SLIRP-202ENST00000553981 FBF1Q8TES7 1133 aa4.65□□□□□ -1.67
SLIRP-202ENST00000553981 ANKRD24Q8TF21 1146 aa4.65□□□□□ -1.67
SLIRP-202ENST00000553981 KIRREL1Q96J84 757 aa4.65□□□□□ -1.67
SLIRP-202ENST00000553981 SETDB2Q96T68 719 aa4.65□□□□□ -1.67
SLIRP-202ENST00000553981 ARID3AQ99856 593 aa4.65□□□□□ -1.67
SLIRP-202ENST00000553981 ATP13A1Q9HD20 1204 aa4.65□□□□□ -1.67
SLIRP-202ENST00000553981 CYP8B1Q9UNU6 501 aa4.65□□□□□ -1.67
SLIRP-202ENST00000553981 GNEQ9Y223 722 aaKnown RBP4.65□□□□□ -1.67
SLIRP-202ENST00000553981 ITSN1Q15811 1721 aa4.64□□□□□ -1.67
SLIRP-202ENST00000553981 RGPD3A6NKT7 1758 aaPredicted RBP4.64□□□□□ -1.67
SLIRP-202ENST00000553981 RGPD4Q7Z3J3 1758 aa4.64□□□□□ -1.67
SLIRP-202ENST00000553981 PLSCR1O15162 318 aa4.64□□□□□ -1.67
SLIRP-202ENST00000553981 TSPAN15O95858 294 aa4.64□□□□□ -1.67
SLIRP-202ENST00000553981 ZNF865P0CJ78 1059 aaPredicted RBP4.64□□□□□ -1.67
SLIRP-202ENST00000553981 MAPK8P45983 427 aa4.64□□□□□ -1.67
SLIRP-202ENST00000553981 SLBPQ14493 270 aaKnown RBP eCLIP4.64□□□□□ -1.67
SLIRP-202ENST00000553981 ZNF827Q17R98 1081 aa4.64□□□□□ -1.67
SLIRP-202ENST00000553981 SFRP5Q5T4F7 317 aa4.64□□□□□ -1.67
SLIRP-202ENST00000553981 CDKAL1Q5VV42 579 aa4.64□□□□□ -1.67
SLIRP-202ENST00000553981 PCNX4Q63HM2 1172 aa4.64□□□□□ -1.67
SLIRP-202ENST00000553981 SYDE1Q6ZW31 735 aaPredicted RBP4.64□□□□□ -1.67
SLIRP-202ENST00000553981 C1QL4Q86Z23 238 aa4.64□□□□□ -1.67
SLIRP-202ENST00000553981 NPAS4Q8IUM7 802 aa4.64□□□□□ -1.67
SLIRP-202ENST00000553981 MFSD4AQ8N468 514 aa4.64□□□□□ -1.67
SLIRP-202ENST00000553981 PLPPR2Q96GM1 343 aa4.64□□□□□ -1.67
SLIRP-202ENST00000553981 MIPEPQ99797 713 aa4.64□□□□□ -1.67
SLIRP-202ENST00000553981 SYT17Q9BSW7 474 aa4.64□□□□□ -1.67
SLIRP-202ENST00000553981 TPX2Q9ULW0 747 aaKnown RBP4.64□□□□□ -1.67
SLIRP-202ENST00000553981 PARD3Q8TEW0 1356 aa4.64□□□□□ -1.67
SLIRP-202ENST00000553981 CRB1P82279 1406 aa4.63□□□□□ -1.67
SLIRP-202ENST00000553981 TUBGCP6Q96RT7 1819 aa4.63□□□□□ -1.67
SLIRP-202ENST00000553981 KRTAP9-7A8MTY7 169 aa4.63□□□□□ -1.67
SLIRP-202ENST00000553981 FAM155AB1AL88 458 aaPredicted RBP4.63□□□□□ -1.67
SLIRP-202ENST00000553981 H3BS24 57 aa4.63□□□□□ -1.67
SLIRP-202ENST00000553981 GDNFP39905 211 aa4.63□□□□□ -1.67
SLIRP-202ENST00000553981 EVA1CP58658 441 aa4.63□□□□□ -1.67
SLIRP-202ENST00000553981 FGD1P98174 961 aa4.63□□□□□ -1.67
SLIRP-202ENST00000553981 FMR1Q06787 632 aaKnown RBP eCLIP4.63□□□□□ -1.67
SLIRP-202ENST00000553981 NKG7Q16617 165 aa4.63□□□□□ -1.67
SLIRP-202ENST00000553981 TXNRD1Q16881 649 aa4.63□□□□□ -1.67
SLIRP-202ENST00000553981 TMEM67Q5HYA8 995 aa4.63□□□□□ -1.67
SLIRP-202ENST00000553981 MPZL3Q6UWV2 235 aa4.63□□□□□ -1.67
SLIRP-202ENST00000553981 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.63□□□□□ -1.67
SLIRP-202ENST00000553981 RIN3Q8TB24 985 aa4.63□□□□□ -1.67
SLIRP-202ENST00000553981 TOX2Q96NM4 488 aa4.63□□□□□ -1.67
SLIRP-202ENST00000553981 PPP1R16BQ96T49 567 aa4.63□□□□□ -1.67
SLIRP-202ENST00000553981 KRTAP4-2Q9BYR5 136 aa4.63□□□□□ -1.67
SLIRP-202ENST00000553981 WNT10AQ9GZT5 417 aa4.63□□□□□ -1.67
SLIRP-202ENST00000553981 SPON1Q9HCB6 807 aa4.63□□□□□ -1.67
SLIRP-202ENST00000553981 WWC3Q9ULE0 1092 aa4.63□□□□□ -1.67
SLIRP-202ENST00000553981 ST14Q9Y5Y6 855 aa4.63□□□□□ -1.67
SLIRP-202ENST00000553981 CAPN6Q9Y6Q1 641 aa4.63□□□□□ -1.67
SLIRP-202ENST00000553981 NINLQ9Y2I6 1382 aa4.63□□□□□ -1.67
SLIRP-202ENST00000553981 COL24A1Q17RW2 1714 aa4.63□□□□□ -1.67
SLIRP-202ENST00000553981 SHANK3Q9BYB0 1731 aa4.63□□□□□ -1.67
SLIRP-202ENST00000553981 OVOS2A0A0G2JMS6 1433 aa4.63□□□□□ -1.67
SLIRP-202ENST00000553981 OVOS2A0A0J9YW53 1432 aa4.63□□□□□ -1.67
SLIRP-202ENST00000553981 BCL9O00512 1426 aa4.63□□□□□ -1.67
SLIRP-202ENST00000553981 USP6P35125 1406 aa4.63□□□□□ -1.67
SLIRP-202ENST00000553981 OVOS2Q6IE36 1432 aa4.63□□□□□ -1.67
SLIRP-202ENST00000553981 PPIP5K1Q6PFW1 1433 aa4.63□□□□□ -1.67
SLIRP-202ENST00000553981 NFAT5O94916 1531 aa4.62□□□□□ -1.67
SLIRP-202ENST00000553981 ZBTB7CA1YPR0 619 aa4.62□□□□□ -1.67
SLIRP-202ENST00000553981 RBAK-RBAKDNI3L0D1 243 aa4.62□□□□□ -1.67
SLIRP-202ENST00000553981 GIPC1O14908 333 aa4.62□□□□□ -1.67
SLIRP-202ENST00000553981 KRT1P04264 644 aa4.62□□□□□ -1.67
SLIRP-202ENST00000553981 FBLN1P23142 703 aa4.62□□□□□ -1.67
SLIRP-202ENST00000553981 CAP2P40123 477 aa4.62□□□□□ -1.67
SLIRP-202ENST00000553981 SLC15A2Q16348 729 aa4.62□□□□□ -1.67
SLIRP-202ENST00000553981 HDXQ7Z353 690 aa4.62□□□□□ -1.67
SLIRP-202ENST00000553981 ARHGEF25Q86VW2 580 aa4.62□□□□□ -1.67
SLIRP-202ENST00000553981 MFSD2AQ8NA29 543 aa4.62□□□□□ -1.67
SLIRP-202ENST00000553981 GAL3ST3Q96A11 431 aa4.62□□□□□ -1.67
SLIRP-202ENST00000553981 THRAP3Q9Y2W1 955 aaKnown RBP4.62□□□□□ -1.67
SLIRP-202ENST00000553981 AATKQ6ZMQ8 1374 aa4.62□□□□□ -1.67
SLIRP-202ENST00000553981 CD163L1Q9NR16 1453 aa4.62□□□□□ -1.67
SLIRP-202ENST00000553981 AKAP12Q02952 1782 aa4.61□□□□□ -1.67
SLIRP-202ENST00000553981 BTAF1O14981 1849 aa4.61□□□□□ -1.67
SLIRP-202ENST00000553981 C1QTNF9P0C862 333 aa4.61□□□□□ -1.67
SLIRP-202ENST00000553981 CDK8P49336 464 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms