RNA–Protein interactions for RNA: ENST00000553404.5

LIN52-201, Transcript of lin-52 DREAM MuvB core complex component, humanhuman

TSL 2

Gene LIN52, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN52-201ENST00000553404 SLC27A2O14975 620 aa11.12□□□□□ -0.63
LIN52-201ENST00000553404 SLURP2P0DP57 97 aa11.12□□□□□ -0.63
LIN52-201ENST00000553404 UBASH3AP57075 661 aa11.12□□□□□ -0.63
LIN52-201ENST00000553404 MECOMQ03112 1051 aa11.12□□□□□ -0.63
LIN52-201ENST00000553404 VGLL4Q14135 290 aa11.12□□□□□ -0.63
LIN52-201ENST00000553404 FAM83AQ86UY5 434 aa11.12□□□□□ -0.63
LIN52-201ENST00000553404 REM2Q8IYK8 340 aaPredicted RBP11.12□□□□□ -0.63
LIN52-201ENST00000553404 ZKSCAN4Q969J2 545 aaPredicted RBP11.12□□□□□ -0.63
LIN52-201ENST00000553404 DHX58Q96C10 678 aa11.12□□□□□ -0.63
LIN52-201ENST00000553404 MCOLN1Q9GZU1 580 aa11.12□□□□□ -0.63
LIN52-201ENST00000553404 TLR7Q9NYK1 1049 aaKnown RBP11.12□□□□□ -0.63
LIN52-201ENST00000553404 TOP1P11387 765 aaKnown RBP11.12□□□□□ -0.63
LIN52-201ENST00000553404 TOB2Q14106 344 aaPredicted RBP11.12□□□□□ -0.63
LIN52-201ENST00000553404 MSL3Q8N5Y2 521 aaKnown RBP11.12□□□□□ -0.63
LIN52-201ENST00000553404 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.12□□□□□ -0.63
LIN52-201ENST00000553404 CCDC12Q8WUD4 166 aaPredicted RBP11.12□□□□□ -0.63
LIN52-201ENST00000553404 MRPS27Q92552 414 aaKnown RBP11.12□□□□□ -0.63
LIN52-201ENST00000553404 FTOQ9C0B1 505 aaKnown RBP eCLIP11.12□□□□□ -0.63
LIN52-201ENST00000553404 KIAA1468Q9P260 1216 aa11.12□□□□□ -0.63
LIN52-201ENST00000553404 MYH2Q9UKX2 1941 aa11.11□□□□□ -0.63
LIN52-201ENST00000553404 IGF2BP3O00425 579 aaKnown RBP eCLIP11.11□□□□□ -0.63
LIN52-201ENST00000553404 BIN1O00499 593 aa11.11□□□□□ -0.63
LIN52-201ENST00000553404 ARID4AP29374 1257 aaPredicted RBP11.11□□□□□ -0.63
LIN52-201ENST00000553404 SREBF2Q12772 1141 aa11.11□□□□□ -0.63
LIN52-201ENST00000553404 TTC39AQ5SRH9 613 aa11.11□□□□□ -0.63
LIN52-201ENST00000553404 FKBP1CQ5VVH2 108 aa11.11□□□□□ -0.63
LIN52-201ENST00000553404 ERC1Q8IUD2 1116 aa11.11□□□□□ -0.63
LIN52-201ENST00000553404 FAM151AQ8WW52 585 aa11.11□□□□□ -0.63
LIN52-201ENST00000553404 MAP4K1Q92918 833 aa11.11□□□□□ -0.63
LIN52-201ENST00000553404 EAF2Q96CJ1 260 aaPredicted RBP11.11□□□□□ -0.63
LIN52-201ENST00000553404 GPATCH3Q96I76 525 aa11.11□□□□□ -0.63
LIN52-201ENST00000553404 WRNIP1Q96S55 665 aa11.11□□□□□ -0.63
LIN52-201ENST00000553404 FAM204AQ9H8W3 233 aa11.11□□□□□ -0.63
LIN52-201ENST00000553404 ZBTB48P10074 688 aaPredicted RBP11.1□□□□□ -0.63
LIN52-201ENST00000553404 BTDP43251 543 aa11.1□□□□□ -0.63
LIN52-201ENST00000553404 FOSBP53539 338 aa11.1□□□□□ -0.63
LIN52-201ENST00000553404 HSP90AB4PQ58FF6 505 aa11.1□□□□□ -0.63
LIN52-201ENST00000553404 SPTY2D1Q68D10 685 aaPredicted RBP11.1□□□□□ -0.63
LIN52-201ENST00000553404 SRGAP1Q7Z6B7 1085 aa11.1□□□□□ -0.63
LIN52-201ENST00000553404 IFNL1Q8IU54 200 aa11.1□□□□□ -0.63
LIN52-201ENST00000553404 ZNF296Q8WUU4 475 aaPredicted RBP11.1□□□□□ -0.63
LIN52-201ENST00000553404 OTUD5Q96G74 571 aa11.1□□□□□ -0.63
LIN52-201ENST00000553404 PTPN18Q99952 460 aa11.1□□□□□ -0.63
LIN52-201ENST00000553404 GBP3Q9H0R5 595 aa11.1□□□□□ -0.63
LIN52-201ENST00000553404 ALDH8A1Q9H2A2 487 aaPredicted RBP11.1□□□□□ -0.63
LIN52-201ENST00000553404 DBNLQ9UJU6 430 aaKnown RBP11.1□□□□□ -0.63
LIN52-201ENST00000553404 L1RE1Q9UN81 338 aa11.1□□□□□ -0.63
LIN52-201ENST00000553404 MANSC4A6NHS7 340 aaPredicted RBP11.1□□□□□ -0.63
LIN52-201ENST00000553404 CCDC85CA6NKD9 419 aa11.1□□□□□ -0.63
LIN52-201ENST00000553404 WDHD1O75717 1129 aaPredicted RBP11.1□□□□□ -0.63
LIN52-201ENST00000553404 INPP5BP32019 993 aa11.1□□□□□ -0.63
LIN52-201ENST00000553404 SSR1P43307 286 aaKnown RBP11.1□□□□□ -0.63
LIN52-201ENST00000553404 USP5P45974 858 aa11.1□□□□□ -0.63
LIN52-201ENST00000553404 GOLGA8FQ08AF8 430 aa11.1□□□□□ -0.63
LIN52-201ENST00000553404 GOLGA8DPQ0D2H9 430 aa11.1□□□□□ -0.63
LIN52-201ENST00000553404 PICALMQ13492 652 aa11.1□□□□□ -0.63
LIN52-201ENST00000553404 WWC2Q6AWC2 1192 aa11.1□□□□□ -0.63
LIN52-201ENST00000553404 ATL3Q6DD88 541 aa11.1□□□□□ -0.63
LIN52-201ENST00000553404 OTUD6BQ8N6M0 293 aa11.1□□□□□ -0.63
LIN52-201ENST00000553404 CEP112Q8N8E3 955 aa11.1□□□□□ -0.63
LIN52-201ENST00000553404 USP28Q96RU2 1077 aa11.1□□□□□ -0.63
LIN52-201ENST00000553404 BAG1Q99933 345 aaPredicted RBP11.1□□□□□ -0.63
LIN52-201ENST00000553404 ABCB6Q9NP58 842 aa11.1□□□□□ -0.63
LIN52-201ENST00000553404 DDX4Q9NQI0 724 aaKnown RBP11.1□□□□□ -0.63
LIN52-201ENST00000553404 LRP2BPQ9P2M1 347 aa11.1□□□□□ -0.63
LIN52-201ENST00000553404 PUF60Q9UHX1 559 aaKnown RBP11.1□□□□□ -0.63
LIN52-201ENST00000553404 CSADQ9Y600 493 aa11.1□□□□□ -0.63
LIN52-201ENST00000553404 NDUFB9Q9Y6M9 179 aa11.1□□□□□ -0.63
LIN52-201ENST00000553404 GAKO14976 1311 aa11.1□□□□□ -0.63
LIN52-201ENST00000553404 GPR25O00155 361 aa11.09□□□□□ -0.63
LIN52-201ENST00000553404 SLC3A2P08195 630 aaKnown RBP11.09□□□□□ -0.63
LIN52-201ENST00000553404 ADD1P35611 737 aaKnown RBP11.09□□□□□ -0.63
LIN52-201ENST00000553404 LIG3P49916 1009 aa11.09□□□□□ -0.63
LIN52-201ENST00000553404 NLRP12P59046 1061 aa11.09□□□□□ -0.63
LIN52-201ENST00000553404 TUBB4BP68371 445 aa11.09□□□□□ -0.63
LIN52-201ENST00000553404 CASP8Q14790 479 aa11.09□□□□□ -0.63
LIN52-201ENST00000553404 ISM2Q6H9L7 571 aa11.09□□□□□ -0.63
LIN52-201ENST00000553404 RPAINQ86UA6 219 aa11.09□□□□□ -0.63
LIN52-201ENST00000553404 FMR1NBQ8N0W7 255 aaPredicted RBP11.09□□□□□ -0.63
LIN52-201ENST00000553404 KIFC2Q96AC6 838 aa11.09□□□□□ -0.63
LIN52-201ENST00000553404 NSUN4Q96CB9 384 aaKnown RBP11.09□□□□□ -0.63
LIN52-201ENST00000553404 EVI5LQ96CN4 794 aa11.09□□□□□ -0.63
LIN52-201ENST00000553404 ANKZF1Q9H8Y5 726 aa11.09□□□□□ -0.63
LIN52-201ENST00000553404 GPR108Q9NPR9 543 aa11.09□□□□□ -0.63
LIN52-201ENST00000553404 RBM28Q9NW13 759 aaKnown RBP11.09□□□□□ -0.63
LIN52-201ENST00000553404 PDS5AQ29RF7 1337 aaKnown RBP11.09□□□□□ -0.63
LIN52-201ENST00000553404 OTOFQ9HC10 1997 aa11.09□□□□□ -0.63
LIN52-201ENST00000553404 A0A1B0GVL5 298 aa11.09□□□□□ -0.63
LIN52-201ENST00000553404 UNCXA6NJT0 531 aa11.09□□□□□ -0.63
LIN52-201ENST00000553404 HIP1O00291 1037 aa11.09□□□□□ -0.63
LIN52-201ENST00000553404 UQCRFS1P1P0C7P4 283 aa11.09□□□□□ -0.63
LIN52-201ENST00000553404 ATP1A3P13637 1013 aa11.09□□□□□ -0.63
LIN52-201ENST00000553404 HNRNPH1P31943 449 aaKnown RBP11.09□□□□□ -0.63
LIN52-201ENST00000553404 ZAP70P43403 619 aa11.09□□□□□ -0.63
LIN52-201ENST00000553404 COL9A3Q14050 684 aaPredicted RBP11.09□□□□□ -0.63
LIN52-201ENST00000553404 SF3A1Q15459 793 aaKnown RBP11.09□□□□□ -0.63
LIN52-201ENST00000553404 SH3BP5LQ7L8J4 393 aa11.09□□□□□ -0.63
LIN52-201ENST00000553404 ZSCAN29Q8IWY8 852 aaPredicted RBP11.09□□□□□ -0.63
LIN52-201ENST00000553404 CLASRPQ8N2M8 674 aaKnown RBP11.09□□□□□ -0.63
LIN52-201ENST00000553404 PDILTQ8N807 584 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms