RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 FMR1Q06787 632 aaKnown RBP eCLIP8.26□□□□□ -1.09
BEST3-212ENST00000553096 MCM6Q14566 821 aa8.26□□□□□ -1.09
BEST3-212ENST00000553096 ZNF569Q5MCW4 686 aa8.26□□□□□ -1.09
BEST3-212ENST00000553096 TRIM22Q8IYM9 498 aa8.26□□□□□ -1.09
BEST3-212ENST00000553096 SPATA20Q8TB22 786 aa8.26□□□□□ -1.09
BEST3-212ENST00000553096 FAM107BQ9H098 131 aa8.26□□□□□ -1.09
BEST3-212ENST00000553096 GNL3LQ9NVN8 582 aaKnown RBP8.26□□□□□ -1.09
BEST3-212ENST00000553096 FBXO2Q9UK22 296 aaPredicted RBP8.26□□□□□ -1.09
BEST3-212ENST00000553096 KLHL33A6NCF5 533 aa8.26□□□□□ -1.09
BEST3-212ENST00000553096 SOWAHDA6NJG2 315 aa8.26□□□□□ -1.09
BEST3-212ENST00000553096 MMP1P03956 469 aa8.26□□□□□ -1.09
BEST3-212ENST00000553096 FGRP09769 529 aa8.26□□□□□ -1.09
BEST3-212ENST00000553096 MAGEA9P43362 315 aa8.26□□□□□ -1.09
BEST3-212ENST00000553096 WDR93Q6P2C0 686 aa8.26□□□□□ -1.09
BEST3-212ENST00000553096 TPTE2Q6XPS3 522 aa8.26□□□□□ -1.09
BEST3-212ENST00000553096 C10orf67Q8IYJ2 551 aa8.26□□□□□ -1.09
BEST3-212ENST00000553096 BRIP1Q9BX63 1249 aa8.26□□□□□ -1.09
BEST3-212ENST00000553096 NACAP1Q9BZK3 213 aa8.26□□□□□ -1.09
BEST3-212ENST00000553096 LZTFL1Q9NQ48 299 aa8.26□□□□□ -1.09
BEST3-212ENST00000553096 SERTAD1Q9UHV2 236 aa8.26□□□□□ -1.09
BEST3-212ENST00000553096 PUF60Q9UHX1 559 aaKnown RBP8.26□□□□□ -1.09
BEST3-212ENST00000553096 SRPRBQ9Y5M8 271 aaKnown RBP8.26□□□□□ -1.09
BEST3-212ENST00000553096 SLC12A7Q9Y666 1083 aa8.26□□□□□ -1.09
BEST3-212ENST00000553096 TNKSO95271 1327 aa8.25□□□□□ -1.09
BEST3-212ENST00000553096 SYNRGQ9UMZ2 1314 aa8.25□□□□□ -1.09
BEST3-212ENST00000553096 POLR2DO15514 142 aaKnown RBP8.25□□□□□ -1.09
BEST3-212ENST00000553096 BMP15O95972 392 aa8.25□□□□□ -1.09
BEST3-212ENST00000553096 CYP2D6P10635 497 aa8.25□□□□□ -1.09
BEST3-212ENST00000553096 IFNAR1P17181 557 aa8.25□□□□□ -1.09
BEST3-212ENST00000553096 PAX7P23759 505 aa8.25□□□□□ -1.09
BEST3-212ENST00000553096 HIBADHP31937 336 aaKnown RBP8.25□□□□□ -1.09
BEST3-212ENST00000553096 PBX1P40424 430 aa8.25□□□□□ -1.09
BEST3-212ENST00000553096 RCAN1P53805 252 aa8.25□□□□□ -1.09
BEST3-212ENST00000553096 SPAG1Q07617 926 aa8.25□□□□□ -1.09
BEST3-212ENST00000553096 WTAPQ15007 396 aa8.25□□□□□ -1.09
BEST3-212ENST00000553096 PRR5LQ6MZQ0 368 aa8.25□□□□□ -1.09
BEST3-212ENST00000553096 ENAHQ8N8S7 591 aaPredicted RBP8.25□□□□□ -1.09
BEST3-212ENST00000553096 MTA3Q9BTC8 594 aa8.25□□□□□ -1.09
BEST3-212ENST00000553096 SLC26A6Q9BXS9 759 aa8.25□□□□□ -1.09
BEST3-212ENST00000553096 ABCB6Q9NP58 842 aa8.25□□□□□ -1.09
BEST3-212ENST00000553096 AATFQ9NY61 560 aaKnown RBP eCLIP8.25□□□□□ -1.09
BEST3-212ENST00000553096 CCDC196A0A1B0GTZ2 297 aa8.25□□□□□ -1.09
BEST3-212ENST00000553096 PPP1R12AO14974 1030 aaPredicted RBP8.25□□□□□ -1.09
BEST3-212ENST00000553096 ACTN4O43707 911 aaKnown RBP8.25□□□□□ -1.09
BEST3-212ENST00000553096 PRDM1O75626 825 aa8.25□□□□□ -1.09
BEST3-212ENST00000553096 RFC4P35249 363 aa8.25□□□□□ -1.09
BEST3-212ENST00000553096 RBL2Q08999 1139 aa8.25□□□□□ -1.09
BEST3-212ENST00000553096 CASP8Q14790 479 aa8.25□□□□□ -1.09
BEST3-212ENST00000553096 TRAPPC3LQ5T215 181 aa8.25□□□□□ -1.09
BEST3-212ENST00000553096 RAD9BQ6WBX8 426 aa8.25□□□□□ -1.09
BEST3-212ENST00000553096 ZNF654Q8IZM8 581 aa8.25□□□□□ -1.09
BEST3-212ENST00000553096 ANKRD20A12PQ8NF67 263 aa8.25□□□□□ -1.09
BEST3-212ENST00000553096 CCDC148Q8NFR7 591 aa8.25□□□□□ -1.09
BEST3-212ENST00000553096 RPGRIP1Q96KN7 1286 aa8.25□□□□□ -1.09
BEST3-212ENST00000553096 ANKRD2Q9GZV1 360 aa8.25□□□□□ -1.09
BEST3-212ENST00000553096 SAMSN1Q9NSI8 373 aaKnown RBP8.25□□□□□ -1.09
BEST3-212ENST00000553096 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.25□□□□□ -1.09
BEST3-212ENST00000553096 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.24□□□□□ -1.09
BEST3-212ENST00000553096 NMT2O60551 498 aa8.24□□□□□ -1.09
BEST3-212ENST00000553096 GYS1P13807 737 aa8.24□□□□□ -1.09
BEST3-212ENST00000553096 GRAPQ13588 217 aa8.24□□□□□ -1.09
BEST3-212ENST00000553096 CDKAL1Q5VV42 579 aa8.24□□□□□ -1.09
BEST3-212ENST00000553096 CYP26C1Q6V0L0 522 aa8.24□□□□□ -1.09
BEST3-212ENST00000553096 GET4Q7L5D6 327 aaPredicted RBP8.24□□□□□ -1.09
BEST3-212ENST00000553096 DIS3L2Q8IYB7 885 aaKnown RBP8.24□□□□□ -1.09
BEST3-212ENST00000553096 TRMT44Q8IYL2 757 aaKnown RBP8.24□□□□□ -1.09
BEST3-212ENST00000553096 GRAPLQ8TC17 118 aaPredicted RBP8.24□□□□□ -1.09
BEST3-212ENST00000553096 PPM1EQ8WY54 764 aa8.24□□□□□ -1.09
BEST3-212ENST00000553096 CCDC102AQ96A19 550 aa8.24□□□□□ -1.09
BEST3-212ENST00000553096 GSDMAQ96QA5 445 aa8.24□□□□□ -1.09
BEST3-212ENST00000553096 PYM1Q9BRP8 204 aaKnown RBP8.24□□□□□ -1.09
BEST3-212ENST00000553096 DCP1AQ9NPI6 582 aaPredicted RBP8.24□□□□□ -1.09
BEST3-212ENST00000553096 ADD3Q9UEY8 706 aaKnown RBP8.24□□□□□ -1.09
BEST3-212ENST00000553096 FOXN1O15353 648 aa8.24□□□□□ -1.09
BEST3-212ENST00000553096 DEXIO95424 95 aa8.24□□□□□ -1.09
BEST3-212ENST00000553096 TOB1P50616 345 aaPredicted RBP8.24□□□□□ -1.09
BEST3-212ENST00000553096 FUT2Q10981 343 aa8.24□□□□□ -1.09
BEST3-212ENST00000553096 MTF1Q14872 753 aa8.24□□□□□ -1.09
BEST3-212ENST00000553096 SART3Q15020 963 aaKnown RBP8.24□□□□□ -1.09
BEST3-212ENST00000553096 RTN1Q16799 776 aa8.24□□□□□ -1.09
BEST3-212ENST00000553096 ZNF827Q17R98 1081 aa8.24□□□□□ -1.09
BEST3-212ENST00000553096 SLC35F6Q8N357 371 aa8.24□□□□□ -1.09
BEST3-212ENST00000553096 PNKPQ96T60 521 aa8.24□□□□□ -1.09
BEST3-212ENST00000553096 ZSWIM4Q9H7M6 989 aa8.24□□□□□ -1.09
BEST3-212ENST00000553096 BRMS1Q9HCU9 246 aa8.24□□□□□ -1.09
BEST3-212ENST00000553096 KCNJ14Q9UNX9 436 aa8.24□□□□□ -1.09
BEST3-212ENST00000553096 FAN1Q9Y2M0 1017 aa8.24□□□□□ -1.09
BEST3-212ENST00000553096 AARSP49588 968 aaKnown RBP eCLIP8.23□□□□□ -1.09
BEST3-212ENST00000553096 GYS2P54840 703 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 FOXD4Q12950 439 aaPredicted RBP8.23□□□□□ -1.09
BEST3-212ENST00000553096 TTC31Q49AM3 519 aaPredicted RBP8.23□□□□□ -1.09
BEST3-212ENST00000553096 HSP90AA4PQ58FG1 418 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 SDR16C5Q8N3Y7 309 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 CCDC82Q8N4S0 544 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 CRACR2BQ8N4Y2 399 aaPredicted RBP8.23□□□□□ -1.09
BEST3-212ENST00000553096 CNBD1Q8NA66 436 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 ZSCAN10Q96SZ4 725 aaPredicted RBP8.23□□□□□ -1.09
BEST3-212ENST00000553096 CXorf56Q9H5V9 222 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 USP17L12C9JPN9 530 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 USP17L21D6R901 530 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms