RNA–Protein interactions for RNA: ENST00000553043.1

LETMD1-236, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-236ENST00000553043 MSL3Q8N5Y2 521 aaKnown RBP8.22□□□□□ -1.09
LETMD1-236ENST00000553043 NEK9Q8TD19 979 aa8.22□□□□□ -1.09
LETMD1-236ENST00000553043 FTOQ9C0B1 505 aaKnown RBP eCLIP8.22□□□□□ -1.09
LETMD1-236ENST00000553043 SERPINB13Q9UIV8 391 aa8.22□□□□□ -1.09
LETMD1-236ENST00000553043 GRIN2DO15399 1336 aa8.22□□□□□ -1.09
LETMD1-236ENST00000553043 SPTBN4Q9H254 2564 aa8.21□□□□□ -1.09
LETMD1-236ENST00000553043 USP5P45974 858 aa8.21□□□□□ -1.1
LETMD1-236ENST00000553043 TFCP2Q12800 502 aa8.21□□□□□ -1.1
LETMD1-236ENST00000553043 ADHFE1Q8IWW8 467 aa8.21□□□□□ -1.1
LETMD1-236ENST00000553043 DDX11Q96FC9 970 aa8.21□□□□□ -1.1
LETMD1-236ENST00000553043 ZBED2Q9BTP6 218 aa8.21□□□□□ -1.1
LETMD1-236ENST00000553043 SNRKQ9NRH2 765 aa8.21□□□□□ -1.1
LETMD1-236ENST00000553043 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.21□□□□□ -1.1
LETMD1-236ENST00000553043 PRKAG3Q9UGI9 489 aa8.21□□□□□ -1.1
LETMD1-236ENST00000553043 FAM50BQ9Y247 325 aa8.21□□□□□ -1.1
LETMD1-236ENST00000553043 SALL2Q9Y467 1007 aaPredicted RBP8.21□□□□□ -1.1
LETMD1-236ENST00000553043 CACNA1BQ00975 2339 aa8.21□□□□□ -1.1
LETMD1-236ENST00000553043 SIPA1L1O43166 1804 aa8.21□□□□□ -1.1
LETMD1-236ENST00000553043 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.2□□□□□ -1.1
LETMD1-236ENST00000553043 TMEM221A6NGB7 291 aa8.2□□□□□ -1.1
LETMD1-236ENST00000553043 H0Y858 1186 aa8.2□□□□□ -1.1
LETMD1-236ENST00000553043 M0R296 226 aa8.2□□□□□ -1.1
LETMD1-236ENST00000553043 CABYRO75952 493 aa8.2□□□□□ -1.1
LETMD1-236ENST00000553043 RGS20O76081 388 aa8.2□□□□□ -1.1
LETMD1-236ENST00000553043 PTGS1P23219 599 aa8.2□□□□□ -1.1
LETMD1-236ENST00000553043 SHMT1P34896 483 aa8.2□□□□□ -1.1
LETMD1-236ENST00000553043 MCAMP43121 646 aa8.2□□□□□ -1.1
LETMD1-236ENST00000553043 SLC4A3P48751 1232 aa8.2□□□□□ -1.1
LETMD1-236ENST00000553043 MTX1Q13505 466 aa8.2□□□□□ -1.1
LETMD1-236ENST00000553043 HERC4Q5GLZ8 1057 aaPredicted RBP8.2□□□□□ -1.1
LETMD1-236ENST00000553043 MAMDC4Q6UXC1 1216 aa8.2□□□□□ -1.1
LETMD1-236ENST00000553043 TRIM67Q6ZTA4 783 aa8.2□□□□□ -1.1
LETMD1-236ENST00000553043 ASCL5Q7RTU5 278 aa8.2□□□□□ -1.1
LETMD1-236ENST00000553043 BMP8AQ7Z5Y6 402 aa8.2□□□□□ -1.1
LETMD1-236ENST00000553043 TTC6Q86TZ1 520 aa8.2□□□□□ -1.1
LETMD1-236ENST00000553043 RNF135Q8IUD6 432 aa8.2□□□□□ -1.1
LETMD1-236ENST00000553043 EDAQ92838 391 aa8.2□□□□□ -1.1
LETMD1-236ENST00000553043 TGS1Q96RS0 853 aaKnown RBP8.2□□□□□ -1.1
LETMD1-236ENST00000553043 EHD4Q9H223 541 aa8.2□□□□□ -1.1
LETMD1-236ENST00000553043 ALDH8A1Q9H2A2 487 aaPredicted RBP8.2□□□□□ -1.1
LETMD1-236ENST00000553043 ABHD16BQ9H3Z7 469 aa8.2□□□□□ -1.1
LETMD1-236ENST00000553043 TLR9Q9NR96 1032 aa8.2□□□□□ -1.1
LETMD1-236ENST00000553043 TRMT13Q9NUP7 481 aaKnown RBP8.2□□□□□ -1.1
LETMD1-236ENST00000553043 FBXO28Q9NVF7 368 aa8.2□□□□□ -1.1
LETMD1-236ENST00000553043 TRPC6Q9Y210 931 aa8.2□□□□□ -1.1
LETMD1-236ENST00000553043 AKAP2Q9Y2D5 859 aa8.2□□□□□ -1.1
LETMD1-236ENST00000553043 REV3LO60673 3130 aa8.2□□□□□ -1.1
LETMD1-236ENST00000553043 KCNJ6P48051 423 aa8.19□□□□□ -1.1
LETMD1-236ENST00000553043 PLCD1P51178 756 aa8.19□□□□□ -1.1
LETMD1-236ENST00000553043 ERVK-21P61565 698 aa8.19□□□□□ -1.1
LETMD1-236ENST00000553043 TNFAIP2Q03169 654 aa8.19□□□□□ -1.1
LETMD1-236ENST00000553043 PKN1Q16512 942 aa8.19□□□□□ -1.1
LETMD1-236ENST00000553043 FSCN1Q16658 493 aaKnown RBP8.19□□□□□ -1.1
LETMD1-236ENST00000553043 TMED8Q6PL24 325 aaPredicted RBP8.19□□□□□ -1.1
LETMD1-236ENST00000553043 FAM9BQ8IZU0 186 aa8.19□□□□□ -1.1
LETMD1-236ENST00000553043 MIGA1Q8NAN2 632 aa8.19□□□□□ -1.1
LETMD1-236ENST00000553043 SSH1Q8WYL5 1049 aa8.19□□□□□ -1.1
LETMD1-236ENST00000553043 CRBNQ96SW2 442 aa8.19□□□□□ -1.1
LETMD1-236ENST00000553043 API5Q9BZZ5 524 aaKnown RBP8.19□□□□□ -1.1
LETMD1-236ENST00000553043 COPRSQ9NQ92 184 aa8.19□□□□□ -1.1
LETMD1-236ENST00000553043 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.19□□□□□ -1.1
LETMD1-236ENST00000553043 ASTN1O14525 1302 aa8.19□□□□□ -1.1
LETMD1-236ENST00000553043 USP34Q70CQ2 3546 aa8.19□□□□□ -1.1
LETMD1-236ENST00000553043 MED19A0JLT2 244 aaPredicted RBP8.18□□□□□ -1.1
LETMD1-236ENST00000553043 VWA5AO00534 786 aa8.18□□□□□ -1.1
LETMD1-236ENST00000553043 DYNC1LI2O43237 492 aaPredicted RBP8.18□□□□□ -1.1
LETMD1-236ENST00000553043 ZEB2O60315 1214 aa8.18□□□□□ -1.1
LETMD1-236ENST00000553043 IQCF3P0C7M6 154 aa8.18□□□□□ -1.1
LETMD1-236ENST00000553043 SUPT20HL2P0C7V6 817 aa8.18□□□□□ -1.1
LETMD1-236ENST00000553043 ARID4AP29374 1257 aaPredicted RBP8.18□□□□□ -1.1
LETMD1-236ENST00000553043 VCPP55072 806 aaKnown RBP8.18□□□□□ -1.1
LETMD1-236ENST00000553043 CLUL1Q15846 466 aa8.18□□□□□ -1.1
LETMD1-236ENST00000553043 ARMCX2Q7L311 632 aa8.18□□□□□ -1.1
LETMD1-236ENST00000553043 TLK2Q86UE8 772 aa8.18□□□□□ -1.1
LETMD1-236ENST00000553043 IFNLR1Q8IU57 520 aaPredicted RBP8.18□□□□□ -1.1
LETMD1-236ENST00000553043 CLEC10AQ8IUN9 316 aa8.18□□□□□ -1.1
LETMD1-236ENST00000553043 FBXL6Q8N531 539 aa8.18□□□□□ -1.1
LETMD1-236ENST00000553043 RETREG2Q8NC44 543 aa8.18□□□□□ -1.1
LETMD1-236ENST00000553043 SEZ6LQ9BYH1 1024 aa8.18□□□□□ -1.1
LETMD1-236ENST00000553043 AP5M1Q9H0R1 490 aa8.18□□□□□ -1.1
LETMD1-236ENST00000553043 IRF2BPLQ9H1B7 796 aa8.18□□□□□ -1.1
LETMD1-236ENST00000553043 VCPKMTQ9H867 229 aa8.18□□□□□ -1.1
LETMD1-236ENST00000553043 ALG13Q9NP73 1137 aaKnown RBP8.18□□□□□ -1.1
LETMD1-236ENST00000553043 ZNF214Q9UL59 606 aaPredicted RBP8.18□□□□□ -1.1
LETMD1-236ENST00000553043 ADAMTS5Q9UNA0 930 aa8.18□□□□□ -1.1
LETMD1-236ENST00000553043 TNKSO95271 1327 aa8.18□□□□□ -1.1
LETMD1-236ENST00000553043 CACNA1HO95180 2353 aa8.18□□□□□ -1.1
LETMD1-236ENST00000553043 WDFY4Q6ZS81 3184 aa8.18□□□□□ -1.1
LETMD1-236ENST00000553043 TECTAO75443 2155 aa8.17□□□□□ -1.1
LETMD1-236ENST00000553043 DNAJC25-GNG10A0A024R161 153 aa8.17□□□□□ -1.1
LETMD1-236ENST00000553043 LINC01553A4QN01 128 aa8.17□□□□□ -1.1
LETMD1-236ENST00000553043 PRR23AA6NEV1 266 aa8.17□□□□□ -1.1
LETMD1-236ENST00000553043 WDR46O15213 610 aaKnown RBP8.17□□□□□ -1.1
LETMD1-236ENST00000553043 RAD21O60216 631 aa8.17□□□□□ -1.1
LETMD1-236ENST00000553043 POLR3DP05423 398 aaPredicted RBP8.17□□□□□ -1.1
LETMD1-236ENST00000553043 UBTFL1P0CB47 393 aaPredicted RBP8.17□□□□□ -1.1
LETMD1-236ENST00000553043 CYP7A1P22680 504 aa8.17□□□□□ -1.1
LETMD1-236ENST00000553043 RFC2P35250 354 aa8.17□□□□□ -1.1
LETMD1-236ENST00000553043 COPB2P35606 906 aa8.17□□□□□ -1.1
LETMD1-236ENST00000553043 WDR5P61964 334 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms