RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 CCDC144BQ3MJ40 725 aa13.61□□□□□ -0.23
NEK3-204ENST00000552973 ZNF697Q5TEC3 545 aa13.61□□□□□ -0.23
NEK3-204ENST00000552973 ARMCX2Q7L311 632 aa13.61□□□□□ -0.23
NEK3-204ENST00000552973 ZNF467Q7Z7K2 595 aaPredicted RBP13.61□□□□□ -0.23
NEK3-204ENST00000552973 CCDC144CPQ8IYA2 1237 aa13.61□□□□□ -0.23
NEK3-204ENST00000552973 CHURC1Q8WUH1 139 aa13.61□□□□□ -0.23
NEK3-204ENST00000552973 VTI1AQ96AJ9 217 aa13.61□□□□□ -0.23
NEK3-204ENST00000552973 TMEM39AQ9NV64 488 aa13.61□□□□□ -0.23
NEK3-204ENST00000552973 FBXO40Q9UH90 709 aa13.61□□□□□ -0.23
NEK3-204ENST00000552973 SYNPO2Q9UMS6 1093 aa13.61□□□□□ -0.23
NEK3-204ENST00000552973 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.61□□□□□ -0.23
NEK3-204ENST00000552973 DDX49Q9Y6V7 483 aaKnown RBP13.61□□□□□ -0.23
NEK3-204ENST00000552973 FRMPD3Q5JV73 1810 aa13.61□□□□□ -0.23
NEK3-204ENST00000552973 ZNF536O15090 1300 aa13.61□□□□□ -0.23
NEK3-204ENST00000552973 SALL3Q9BXA9 1300 aa13.61□□□□□ -0.23
NEK3-204ENST00000552973 LAMA3Q16787 3333 aa13.61□□□□□ -0.23
NEK3-204ENST00000552973 PLIN4Q96Q06 1357 aa13.6□□□□□ -0.23
NEK3-204ENST00000552973 DUSP11O75319 330 aaKnown RBP13.6□□□□□ -0.23
NEK3-204ENST00000552973 ALAS1P13196 640 aa13.6□□□□□ -0.23
NEK3-204ENST00000552973 OAZ1P54368 228 aa13.6□□□□□ -0.23
NEK3-204ENST00000552973 FAAP100Q0VG06 881 aa13.6□□□□□ -0.23
NEK3-204ENST00000552973 RRP12Q5JTH9 1297 aaKnown RBP13.6□□□□□ -0.23
NEK3-204ENST00000552973 FAM109BQ6ICB4 259 aaPredicted RBP13.6□□□□□ -0.23
NEK3-204ENST00000552973 CCSAPQ6IQ19 270 aaPredicted RBP13.6□□□□□ -0.23
NEK3-204ENST00000552973 FAM160B2Q86V87 743 aa13.6□□□□□ -0.23
NEK3-204ENST00000552973 NUP133Q8WUM0 1156 aa13.6□□□□□ -0.23
NEK3-204ENST00000552973 EVI5LQ96CN4 794 aa13.6□□□□□ -0.23
NEK3-204ENST00000552973 GMCL1Q96IK5 515 aa13.6□□□□□ -0.23
NEK3-204ENST00000552973 TRERF1Q96PN7 1200 aa13.6□□□□□ -0.23
NEK3-204ENST00000552973 TSEN34Q9BSV6 310 aaKnown RBP13.6□□□□□ -0.23
NEK3-204ENST00000552973 ABHD16BQ9H3Z7 469 aa13.6□□□□□ -0.23
NEK3-204ENST00000552973 ACAD9Q9H845 621 aa13.6□□□□□ -0.23
NEK3-204ENST00000552973 TOMM22Q9NS69 142 aa13.6□□□□□ -0.23
NEK3-204ENST00000552973 RNF146Q9NTX7 359 aa13.6□□□□□ -0.23
NEK3-204ENST00000552973 MYH8P13535 1937 aa13.6□□□□□ -0.23
NEK3-204ENST00000552973 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.59□□□□□ -0.23
NEK3-204ENST00000552973 SOWAHBA6NEL2 793 aa13.59□□□□□ -0.23
NEK3-204ENST00000552973 MOXD2PA6NHM9 499 aa13.59□□□□□ -0.23
NEK3-204ENST00000552973 KIAA0355O15063 1070 aa13.59□□□□□ -0.23
NEK3-204ENST00000552973 ASGR1P07306 291 aa13.59□□□□□ -0.23
NEK3-204ENST00000552973 PTGS1P23219 599 aa13.59□□□□□ -0.23
NEK3-204ENST00000552973 PDE1AP54750 535 aa13.59□□□□□ -0.23
NEK3-204ENST00000552973 RCSD1Q6JBY9 416 aa13.59□□□□□ -0.23
NEK3-204ENST00000552973 NOL8Q76FK4 1167 aaKnown RBP13.59□□□□□ -0.23
NEK3-204ENST00000552973 FAM227BQ96M60 508 aa13.59□□□□□ -0.23
NEK3-204ENST00000552973 GLT1D1Q96MS3 346 aa13.59□□□□□ -0.23
NEK3-204ENST00000552973 A1CFQ9NQ94 594 aaKnown RBP13.59□□□□□ -0.23
NEK3-204ENST00000552973 PRR12Q9ULL5 1215 aa13.59□□□□□ -0.23
NEK3-204ENST00000552973 MYH7P12883 1935 aa13.58□□□□□ -0.23
NEK3-204ENST00000552973 GREB1LQ9C091 1923 aaPredicted RBP13.58□□□□□ -0.23
NEK3-204ENST00000552973 COL11A1P12107 1806 aaPredicted RBP13.58□□□□□ -0.24
NEK3-204ENST00000552973 DCDC2CA8MYV0 355 aa13.58□□□□□ -0.24
NEK3-204ENST00000552973 FDX1P10109 184 aa13.58□□□□□ -0.24
NEK3-204ENST00000552973 SLC16A2P36021 539 aa13.58□□□□□ -0.24
NEK3-204ENST00000552973 BEX3Q00994 111 aa13.58□□□□□ -0.24
NEK3-204ENST00000552973 CCDC96Q2M329 555 aa13.58□□□□□ -0.24
NEK3-204ENST00000552973 MUM1L1Q5H9M0 696 aa13.58□□□□□ -0.24
NEK3-204ENST00000552973 GNASQ5JWF2 1037 aa13.58□□□□□ -0.24
NEK3-204ENST00000552973 TTBK2Q6IQ55 1244 aa13.58□□□□□ -0.24
NEK3-204ENST00000552973 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.58□□□□□ -0.24
NEK3-204ENST00000552973 EEPD1Q7L9B9 569 aa13.58□□□□□ -0.24
NEK3-204ENST00000552973 ANKRD33Q7Z3H0 272 aa13.58□□□□□ -0.24
NEK3-204ENST00000552973 FAM133AQ8N9E0 248 aa13.58□□□□□ -0.24
NEK3-204ENST00000552973 PCSK9Q8NBP7 692 aaKnown RBP13.58□□□□□ -0.24
NEK3-204ENST00000552973 RNPC3Q96LT9 517 aaKnown RBP13.58□□□□□ -0.24
NEK3-204ENST00000552973 PURBQ96QR8 312 aaKnown RBP13.58□□□□□ -0.24
NEK3-204ENST00000552973 CDX2Q99626 313 aaPredicted RBP13.58□□□□□ -0.24
NEK3-204ENST00000552973 KATNBL1Q9H079 304 aa13.58□□□□□ -0.24
NEK3-204ENST00000552973 SEMA6BQ9H3T3 888 aa13.58□□□□□ -0.24
NEK3-204ENST00000552973 SPC25Q9HBM1 224 aa13.58□□□□□ -0.24
NEK3-204ENST00000552973 HELLSQ9NRZ9 838 aa13.58□□□□□ -0.24
NEK3-204ENST00000552973 PARP14Q460N5 1801 aa13.57□□□□□ -0.24
NEK3-204ENST00000552973 A0A0D9SFI3 127 aa13.57□□□□□ -0.24
NEK3-204ENST00000552973 FGAP02671 866 aa13.57□□□□□ -0.24
NEK3-204ENST00000552973 GJA9P57773 515 aa13.57□□□□□ -0.24
NEK3-204ENST00000552973 HAND2P61296 217 aa13.57□□□□□ -0.24
NEK3-204ENST00000552973 FPGSQ05932 587 aa13.57□□□□□ -0.24
NEK3-204ENST00000552973 TMEM63BQ5T3F8 832 aa13.57□□□□□ -0.24
NEK3-204ENST00000552973 B4GALNT3Q6L9W6 998 aa13.57□□□□□ -0.24
NEK3-204ENST00000552973 NSMFQ6X4W1 530 aa13.57□□□□□ -0.24
NEK3-204ENST00000552973 TOX2Q96NM4 488 aa13.57□□□□□ -0.24
NEK3-204ENST00000552973 LNPKQ9C0E8 428 aa13.57□□□□□ -0.24
NEK3-204ENST00000552973 PDGFCQ9NRA1 345 aa13.57□□□□□ -0.24
NEK3-204ENST00000552973 ANAPC4Q9UJX5 808 aa13.57□□□□□ -0.24
NEK3-204ENST00000552973 TRIM6-TRIM34B2RNG4 842 aa13.56□□□□□ -0.24
NEK3-204ENST00000552973 CTAGE5O15320 804 aa13.56□□□□□ -0.24
NEK3-204ENST00000552973 PLA2G6O60733 806 aa13.56□□□□□ -0.24
NEK3-204ENST00000552973 CST5P28325 142 aaPredicted RBP13.56□□□□□ -0.24
NEK3-204ENST00000552973 TNFAIP2Q03169 654 aa13.56□□□□□ -0.24
NEK3-204ENST00000552973 NMIQ13287 307 aaPredicted RBP13.56□□□□□ -0.24
NEK3-204ENST00000552973 TKFCQ3LXA3 575 aa13.56□□□□□ -0.24
NEK3-204ENST00000552973 MCMDC2Q4G0Z9 681 aa13.56□□□□□ -0.24
NEK3-204ENST00000552973 PPP4R3BQ5MIZ7 849 aa13.56□□□□□ -0.24
NEK3-204ENST00000552973 ZNF589Q86UQ0 364 aaPredicted RBP13.56□□□□□ -0.24
NEK3-204ENST00000552973 RILPL2Q969X0 211 aa13.56□□□□□ -0.24
NEK3-204ENST00000552973 UPF3AQ9H1J1 476 aaKnown RBP13.56□□□□□ -0.24
NEK3-204ENST00000552973 TTYH1Q9H313 450 aaPredicted RBP13.56□□□□□ -0.24
NEK3-204ENST00000552973 GPCPD1Q9NPB8 672 aa13.56□□□□□ -0.24
NEK3-204ENST00000552973 CCPG1Q9ULG6 757 aa13.56□□□□□ -0.24
NEK3-204ENST00000552973 ELP1O95163 1332 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms