RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 APAF1O14727 1248 aa10.71□□□□□ -0.69
PRKCH-203ENST00000552875 SNAI1O95863 264 aaPredicted RBP10.71□□□□□ -0.69
PRKCH-203ENST00000552875 VCPP55072 806 aaKnown RBP10.71□□□□□ -0.69
PRKCH-203ENST00000552875 NKX3-2P78367 333 aa10.71□□□□□ -0.69
PRKCH-203ENST00000552875 ACAP1Q15027 740 aa10.71□□□□□ -0.69
PRKCH-203ENST00000552875 CCDC27Q2M243 656 aa10.71□□□□□ -0.69
PRKCH-203ENST00000552875 TATDN1Q6P1N9 297 aa10.71□□□□□ -0.69
PRKCH-203ENST00000552875 ZNF467Q7Z7K2 595 aaPredicted RBP10.71□□□□□ -0.69
PRKCH-203ENST00000552875 RIOX2Q8IUF8 465 aa10.71□□□□□ -0.69
PRKCH-203ENST00000552875 ANKRD44Q8N8A2 993 aa10.71□□□□□ -0.69
PRKCH-203ENST00000552875 ACER1Q8TDN7 264 aa10.71□□□□□ -0.69
PRKCH-203ENST00000552875 RMDN1Q96DB5 314 aa10.71□□□□□ -0.69
PRKCH-203ENST00000552875 VWCEQ96DN2 955 aa10.71□□□□□ -0.69
PRKCH-203ENST00000552875 ALG13Q9NP73 1137 aaKnown RBP10.71□□□□□ -0.69
PRKCH-203ENST00000552875 BAHCC1Q9P281 2608 aa10.71□□□□□ -0.69
PRKCH-203ENST00000552875 CHD8Q9HCK8 2581 aa10.71□□□□□ -0.7
PRKCH-203ENST00000552875 BRWD1Q9NSI6 2320 aa10.7□□□□□ -0.7
PRKCH-203ENST00000552875 LCHNA4D1U4 455 aa10.7□□□□□ -0.7
PRKCH-203ENST00000552875 PITPNM1O00562 1244 aa10.7□□□□□ -0.7
PRKCH-203ENST00000552875 CIAO1O76071 339 aa10.7□□□□□ -0.7
PRKCH-203ENST00000552875 SPRED2Q7Z698 418 aa10.7□□□□□ -0.7
PRKCH-203ENST00000552875 MAGEB6Q8N7X4 407 aa10.7□□□□□ -0.7
PRKCH-203ENST00000552875 ATG4CQ96DT6 458 aa10.7□□□□□ -0.7
PRKCH-203ENST00000552875 AP5M1Q9H0R1 490 aa10.7□□□□□ -0.7
PRKCH-203ENST00000552875 ALDH8A1Q9H2A2 487 aaPredicted RBP10.7□□□□□ -0.7
PRKCH-203ENST00000552875 NSUN3Q9H649 340 aaKnown RBP10.7□□□□□ -0.7
PRKCH-203ENST00000552875 AATFQ9NY61 560 aaKnown RBP eCLIP10.7□□□□□ -0.7
PRKCH-203ENST00000552875 SERPINB13Q9UIV8 391 aa10.7□□□□□ -0.7
PRKCH-203ENST00000552875 COL4A4P53420 1690 aaPredicted RBP10.69□□□□□ -0.7
PRKCH-203ENST00000552875 CACNA1HO95180 2353 aa10.69□□□□□ -0.7
PRKCH-203ENST00000552875 KMT2BQ9UMN6 2715 aaPredicted RBP10.69□□□□□ -0.7
PRKCH-203ENST00000552875 LINC01553A4QN01 128 aa10.69□□□□□ -0.7
PRKCH-203ENST00000552875 STAT3P40763 770 aa10.69□□□□□ -0.7
PRKCH-203ENST00000552875 IRX5P78411 483 aaPredicted RBP10.69□□□□□ -0.7
PRKCH-203ENST00000552875 BEX3Q00994 111 aa10.69□□□□□ -0.7
PRKCH-203ENST00000552875 SMAD4Q13485 552 aaKnown RBP10.69□□□□□ -0.7
PRKCH-203ENST00000552875 BFSP2Q13515 415 aa10.69□□□□□ -0.7
PRKCH-203ENST00000552875 MVPQ14764 893 aaKnown RBP10.69□□□□□ -0.7
PRKCH-203ENST00000552875 COL19A1Q14993 1142 aa10.69□□□□□ -0.7
PRKCH-203ENST00000552875 TMEM132BQ14DG7 1078 aa10.69□□□□□ -0.7
PRKCH-203ENST00000552875 FSCN1Q16658 493 aaKnown RBP10.69□□□□□ -0.7
PRKCH-203ENST00000552875 SAMD11Q96NU1 681 aa10.69□□□□□ -0.7
PRKCH-203ENST00000552875 SH2D4AQ9H788 454 aa10.69□□□□□ -0.7
PRKCH-203ENST00000552875 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.69□□□□□ -0.7
PRKCH-203ENST00000552875 LRP2BPQ9P2M1 347 aa10.69□□□□□ -0.7
PRKCH-203ENST00000552875 COL4A6Q14031 1691 aa10.69□□□□□ -0.7
PRKCH-203ENST00000552875 SMCHD1A6NHR9 2005 aa10.68□□□□□ -0.7
PRKCH-203ENST00000552875 TECTAO75443 2155 aa10.68□□□□□ -0.7
PRKCH-203ENST00000552875 MBTPS2O43462 519 aa10.68□□□□□ -0.7
PRKCH-203ENST00000552875 EFCAB14O75071 495 aa10.68□□□□□ -0.7
PRKCH-203ENST00000552875 GJB5O95377 273 aa10.68□□□□□ -0.7
PRKCH-203ENST00000552875 IQCF3P0C7M6 154 aa10.68□□□□□ -0.7
PRKCH-203ENST00000552875 CYP2C9P11712 490 aa10.68□□□□□ -0.7
PRKCH-203ENST00000552875 IL15P40933 162 aaPredicted RBP10.68□□□□□ -0.7
PRKCH-203ENST00000552875 WDR5P61964 334 aaKnown RBP10.68□□□□□ -0.7
PRKCH-203ENST00000552875 TNFAIP2Q03169 654 aa10.68□□□□□ -0.7
PRKCH-203ENST00000552875 LRRFIP1Q32MZ4 808 aaKnown RBP10.68□□□□□ -0.7
PRKCH-203ENST00000552875 TCEAL5Q5H9L2 206 aa10.68□□□□□ -0.7
PRKCH-203ENST00000552875 ATG9AQ7Z3C6 839 aa10.68□□□□□ -0.7
PRKCH-203ENST00000552875 ZNF384Q8TF68 577 aa10.68□□□□□ -0.7
PRKCH-203ENST00000552875 EHD4Q9H223 541 aa10.68□□□□□ -0.7
PRKCH-203ENST00000552875 SAP30BPQ9UHR5 308 aaKnown RBP10.68□□□□□ -0.7
PRKCH-203ENST00000552875 MYO15AQ9UKN7 3530 aa10.68□□□□□ -0.7
PRKCH-203ENST00000552875 RIF1Q5UIP0 2472 aaKnown RBP10.67□□□□□ -0.7
PRKCH-203ENST00000552875 FAM186AA6NE01 2351 aa10.67□□□□□ -0.7
PRKCH-203ENST00000552875 PPP4CP60510 307 aa10.67□□□□□ -0.7
PRKCH-203ENST00000552875 NAA16Q6N069 864 aaPredicted RBP10.67□□□□□ -0.7
PRKCH-203ENST00000552875 FRMD5Q7Z6J6 570 aa10.67□□□□□ -0.7
PRKCH-203ENST00000552875 TTC6Q86TZ1 520 aa10.67□□□□□ -0.7
PRKCH-203ENST00000552875 RPAINQ86UA6 219 aa10.67□□□□□ -0.7
PRKCH-203ENST00000552875 TLK2Q86UE8 772 aa10.67□□□□□ -0.7
PRKCH-203ENST00000552875 CCDC155Q8N6L0 562 aa10.67□□□□□ -0.7
PRKCH-203ENST00000552875 TRMT13Q9NUP7 481 aaKnown RBP10.67□□□□□ -0.7
PRKCH-203ENST00000552875 INSL6Q9Y581 213 aa10.67□□□□□ -0.7
PRKCH-203ENST00000552875 GRIN2DO15399 1336 aa10.66□□□□□ -0.7
PRKCH-203ENST00000552875 MPHOSPH10O00566 681 aaKnown RBP10.66□□□□□ -0.7
PRKCH-203ENST00000552875 CTAGE5O15320 804 aa10.66□□□□□ -0.7
PRKCH-203ENST00000552875 ADCY6O43306 1168 aa10.66□□□□□ -0.7
PRKCH-203ENST00000552875 PARNO95453 639 aaKnown RBP10.66□□□□□ -0.7
PRKCH-203ENST00000552875 ADORA1P30542 326 aa10.66□□□□□ -0.7
PRKCH-203ENST00000552875 MCAMP43121 646 aa10.66□□□□□ -0.7
PRKCH-203ENST00000552875 DDX10Q13206 875 aaKnown RBP10.66□□□□□ -0.7
PRKCH-203ENST00000552875 CLUL1Q15846 466 aa10.66□□□□□ -0.7
PRKCH-203ENST00000552875 DIEXFQ68CQ4 756 aaKnown RBP10.66□□□□□ -0.7
PRKCH-203ENST00000552875 CERS3Q8IU89 383 aa10.66□□□□□ -0.7
PRKCH-203ENST00000552875 SPATA5Q8NB90 893 aa10.66□□□□□ -0.7
PRKCH-203ENST00000552875 ASIC4Q96FT7 647 aa10.66□□□□□ -0.7
PRKCH-203ENST00000552875 NOD1Q9Y239 953 aa10.66□□□□□ -0.7
PRKCH-203ENST00000552875 AKAP2Q9Y2D5 859 aa10.66□□□□□ -0.7
PRKCH-203ENST00000552875 ABHD14A-ACY1A0A1B0GW23 586 aa10.65□□□□□ -0.7
PRKCH-203ENST00000552875 WDR46O15213 610 aaKnown RBP10.65□□□□□ -0.7
PRKCH-203ENST00000552875 PSMC6P62333 389 aa10.65□□□□□ -0.7
PRKCH-203ENST00000552875 GORABQ5T7V8 394 aa10.65□□□□□ -0.7
PRKCH-203ENST00000552875 CNKSR3Q6P9H4 555 aa10.65□□□□□ -0.7
PRKCH-203ENST00000552875 ARMCX2Q7L311 632 aa10.65□□□□□ -0.7
PRKCH-203ENST00000552875 KCNG4Q8TDN1 519 aa10.65□□□□□ -0.7
PRKCH-203ENST00000552875 C17orf80Q9BSJ5 609 aa10.65□□□□□ -0.7
PRKCH-203ENST00000552875 ARHGEF10LQ9HCE6 1279 aa10.65□□□□□ -0.7
PRKCH-203ENST00000552875 GPHNQ9NQX3 736 aaPredicted RBP10.65□□□□□ -0.7
PRKCH-203ENST00000552875 CD207Q9UJ71 328 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms