RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 SLC4A7Q9Y6M7 1214 aa13.77□□□□□ -0.21
SUPT16H-202ENST00000552829 MAGEB6P1A0A0J9YX57 407 aa13.76□□□□□ -0.21
SUPT16H-202ENST00000552829 EPOPA6NHQ4 379 aa13.76□□□□□ -0.21
SUPT16H-202ENST00000552829 APBB1O00213 710 aa13.76□□□□□ -0.21
SUPT16H-202ENST00000552829 RARSP54136 660 aaKnown RBP13.76□□□□□ -0.21
SUPT16H-202ENST00000552829 DYNLL2Q96FJ2 89 aa13.76□□□□□ -0.21
SUPT16H-202ENST00000552829 AGBL1Q96MI9 1066 aa13.76□□□□□ -0.21
SUPT16H-202ENST00000552829 CRNKL1Q9BZJ0 848 aaKnown RBP13.76□□□□□ -0.21
SUPT16H-202ENST00000552829 WNT8AQ9H1J5 351 aa13.76□□□□□ -0.21
SUPT16H-202ENST00000552829 ABHD16BQ9H3Z7 469 aa13.76□□□□□ -0.21
SUPT16H-202ENST00000552829 SPC25Q9HBM1 224 aa13.76□□□□□ -0.21
SUPT16H-202ENST00000552829 CD320Q9NPF0 282 aa13.76□□□□□ -0.21
SUPT16H-202ENST00000552829 DCP1AQ9NPI6 582 aaPredicted RBP13.76□□□□□ -0.21
SUPT16H-202ENST00000552829 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.76□□□□□ -0.21
SUPT16H-202ENST00000552829 NOP58Q9Y2X3 529 aaKnown RBP13.76□□□□□ -0.21
SUPT16H-202ENST00000552829 RIPK3Q9Y572 518 aa13.76□□□□□ -0.21
SUPT16H-202ENST00000552829 SCN5AQ14524 2016 aa13.76□□□□□ -0.21
SUPT16H-202ENST00000552829 ASTN1O14525 1302 aa13.75□□□□□ -0.21
SUPT16H-202ENST00000552829 FAM86C2PA6NEL3 165 aa13.75□□□□□ -0.21
SUPT16H-202ENST00000552829 EEF2P13639 858 aaKnown RBP13.75□□□□□ -0.21
SUPT16H-202ENST00000552829 ATP8B2P98198 1209 aa13.75□□□□□ -0.21
SUPT16H-202ENST00000552829 SKIV2LQ15477 1246 aaKnown RBP13.75□□□□□ -0.21
SUPT16H-202ENST00000552829 CCDC17Q96LX7 622 aa13.75□□□□□ -0.21
SUPT16H-202ENST00000552829 CCDC8Q9H0W5 538 aaPredicted RBP13.75□□□□□ -0.21
SUPT16H-202ENST00000552829 SSUH2Q9Y2M2 353 aa13.75□□□□□ -0.21
SUPT16H-202ENST00000552829 TET1Q8NFU7 2136 aa13.75□□□□□ -0.21
SUPT16H-202ENST00000552829 GREB1LQ9C091 1923 aaPredicted RBP13.74□□□□□ -0.21
SUPT16H-202ENST00000552829 SMIM22K7EJ46 135 aa13.74□□□□□ -0.21
SUPT16H-202ENST00000552829 ATP2A1O14983 1001 aa13.74□□□□□ -0.21
SUPT16H-202ENST00000552829 GTPBP6O43824 516 aaPredicted RBP13.74□□□□□ -0.21
SUPT16H-202ENST00000552829 ATP2A2P16615 1042 aaKnown RBP13.74□□□□□ -0.21
SUPT16H-202ENST00000552829 CCL23P55773 120 aa13.74□□□□□ -0.21
SUPT16H-202ENST00000552829 KRT40Q6A162 431 aa13.74□□□□□ -0.21
SUPT16H-202ENST00000552829 RPUSD2Q8IZ73 545 aaKnown RBP13.74□□□□□ -0.21
SUPT16H-202ENST00000552829 DDX11Q96FC9 970 aa13.74□□□□□ -0.21
SUPT16H-202ENST00000552829 TEX13BQ9BXU2 312 aa13.74□□□□□ -0.21
SUPT16H-202ENST00000552829 SEZ6LQ9BYH1 1024 aa13.74□□□□□ -0.21
SUPT16H-202ENST00000552829 TCRBV5S4A2TA0A5A2 114 aa13.73□□□□□ -0.21
SUPT16H-202ENST00000552829 SURF6O75683 361 aaKnown RBP13.73□□□□□ -0.21
SUPT16H-202ENST00000552829 CABYRO75952 493 aa13.73□□□□□ -0.21
SUPT16H-202ENST00000552829 CA3P07451 260 aa13.73□□□□□ -0.21
SUPT16H-202ENST00000552829 TRIM27P14373 513 aa13.73□□□□□ -0.21
SUPT16H-202ENST00000552829 PDE6AP16499 860 aa13.73□□□□□ -0.21
SUPT16H-202ENST00000552829 BEX3Q00994 111 aa13.73□□□□□ -0.21
SUPT16H-202ENST00000552829 TTLL4Q14679 1199 aa13.73□□□□□ -0.21
SUPT16H-202ENST00000552829 FAM83BQ5T0W9 1011 aa13.73□□□□□ -0.21
SUPT16H-202ENST00000552829 SDR42E1Q8WUS8 393 aa13.73□□□□□ -0.21
SUPT16H-202ENST00000552829 HLA-CQ95604 372 aa13.73□□□□□ -0.21
SUPT16H-202ENST00000552829 TRPV6Q9H1D0 765 aa13.73□□□□□ -0.21
SUPT16H-202ENST00000552829 KANSL2Q9H9L4 492 aa13.73□□□□□ -0.21
SUPT16H-202ENST00000552829 TNNQ9UQP3 1299 aa13.73□□□□□ -0.21
SUPT16H-202ENST00000552829 GNEQ9Y223 722 aaKnown RBP13.73□□□□□ -0.21
SUPT16H-202ENST00000552829 ZNF318Q5VUA4 2279 aa13.73□□□□□ -0.21
SUPT16H-202ENST00000552829 B4GALT4O60513 344 aa13.72□□□□□ -0.21
SUPT16H-202ENST00000552829 LPXNO60711 386 aa13.72□□□□□ -0.21
SUPT16H-202ENST00000552829 ARHGEF15O94989 841 aa13.72□□□□□ -0.21
SUPT16H-202ENST00000552829 CDK8P49336 464 aa13.72□□□□□ -0.21
SUPT16H-202ENST00000552829 TAP1Q03518 808 aa13.72□□□□□ -0.21
SUPT16H-202ENST00000552829 OS9Q13438 667 aaPredicted RBP13.72□□□□□ -0.21
SUPT16H-202ENST00000552829 ITGA7Q13683 1181 aa13.72□□□□□ -0.21
SUPT16H-202ENST00000552829 TMEM67Q5HYA8 995 aa13.72□□□□□ -0.21
SUPT16H-202ENST00000552829 SNRNP48Q6IEG0 339 aaKnown RBP13.72□□□□□ -0.21
SUPT16H-202ENST00000552829 CXCL17Q6UXB2 119 aa13.72□□□□□ -0.21
SUPT16H-202ENST00000552829 ARMCX2Q7L311 632 aa13.72□□□□□ -0.21
SUPT16H-202ENST00000552829 LCORLQ8N3X6 602 aa13.72□□□□□ -0.21
SUPT16H-202ENST00000552829 SPRYD3Q8NCJ5 442 aa13.72□□□□□ -0.21
SUPT16H-202ENST00000552829 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.72□□□□□ -0.21
SUPT16H-202ENST00000552829 GOPCQ9HD26 462 aa13.72□□□□□ -0.21
SUPT16H-202ENST00000552829 ZBED9Q6R2W3 1325 aa13.71□□□□□ -0.21
SUPT16H-202ENST00000552829 PTPRSQ13332 1948 aa13.71□□□□□ -0.21
SUPT16H-202ENST00000552829 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.71□□□□□ -0.21
SUPT16H-202ENST00000552829 PRR33A8MZF0 331 aa13.71□□□□□ -0.21
SUPT16H-202ENST00000552829 BCAR3O75815 825 aa13.71□□□□□ -0.21
SUPT16H-202ENST00000552829 MRE11P49959 708 aa13.71□□□□□ -0.21
SUPT16H-202ENST00000552829 SLC9C2Q5TAH2 1124 aa13.71□□□□□ -0.21
SUPT16H-202ENST00000552829 C12orf60Q5U649 245 aa13.71□□□□□ -0.21
SUPT16H-202ENST00000552829 C16orf86Q6ZW13 317 aa13.71□□□□□ -0.21
SUPT16H-202ENST00000552829 SCLYQ96I15 445 aa13.71□□□□□ -0.21
SUPT16H-202ENST00000552829 SLF1Q9BQI6 1058 aa13.71□□□□□ -0.21
SUPT16H-202ENST00000552829 CERS4Q9HA82 394 aa13.71□□□□□ -0.21
SUPT16H-202ENST00000552829 WDFY4Q6ZS81 3184 aa13.71□□□□□ -0.21
SUPT16H-202ENST00000552829 ZNF532Q9HCE3 1301 aa13.7□□□□□ -0.22
SUPT16H-202ENST00000552829 ZBBXA8MT70 800 aa13.7□□□□□ -0.22
SUPT16H-202ENST00000552829 PFKMP08237 780 aa13.7□□□□□ -0.22
SUPT16H-202ENST00000552829 GRB10Q13322 594 aa13.7□□□□□ -0.22
SUPT16H-202ENST00000552829 CCDC144CPQ8IYA2 1237 aa13.7□□□□□ -0.22
SUPT16H-202ENST00000552829 PRPF38AQ8NAV1 312 aaKnown RBP13.7□□□□□ -0.22
SUPT16H-202ENST00000552829 PHOSPHO2Q8TCD6 241 aa13.7□□□□□ -0.22
SUPT16H-202ENST00000552829 SNX27Q96L92 541 aa13.7□□□□□ -0.22
SUPT16H-202ENST00000552829 ATP8A2Q9NTI2 1148 aa13.7□□□□□ -0.22
SUPT16H-202ENST00000552829 CYP2D7A0A087X1C5 515 aa13.69□□□□□ -0.22
SUPT16H-202ENST00000552829 PRKAB2O43741 272 aa13.69□□□□□ -0.22
SUPT16H-202ENST00000552829 TNFAIP2Q03169 654 aa13.69□□□□□ -0.22
SUPT16H-202ENST00000552829 FSCN1Q16658 493 aaKnown RBP13.69□□□□□ -0.22
SUPT16H-202ENST00000552829 FAM133AQ8N9E0 248 aa13.69□□□□□ -0.22
SUPT16H-202ENST00000552829 NUP88Q99567 741 aaPredicted RBP13.69□□□□□ -0.22
SUPT16H-202ENST00000552829 COL4A4P53420 1690 aaPredicted RBP13.69□□□□□ -0.22
SUPT16H-202ENST00000552829 TRIP12Q14669 1992 aaPredicted RBP13.69□□□□□ -0.22
SUPT16H-202ENST00000552829 SCN10AQ9Y5Y9 1956 aa13.69□□□□□ -0.22
SUPT16H-202ENST00000552829 MYH4Q9Y623 1939 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms