RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 RAVER2Q9HCJ3 691 aaKnown RBP14.11□□□□□ -0.15
CKAP4-202ENST00000552828 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.11□□□□□ -0.15
CKAP4-202ENST00000552828 ZHX1Q9UKY1 873 aaPredicted RBP14.11□□□□□ -0.15
CKAP4-202ENST00000552828 MYH7P12883 1935 aa14.1□□□□□ -0.15
CKAP4-202ENST00000552828 MYADML2A6NDP7 307 aa14.1□□□□□ -0.15
CKAP4-202ENST00000552828 ADCY6O43306 1168 aa14.1□□□□□ -0.15
CKAP4-202ENST00000552828 TDO2P48775 406 aa14.1□□□□□ -0.15
CKAP4-202ENST00000552828 IRX6P78412 446 aaPredicted RBP14.1□□□□□ -0.15
CKAP4-202ENST00000552828 HDAC1Q13547 482 aaPredicted RBP14.1□□□□□ -0.15
CKAP4-202ENST00000552828 LRRFIP1Q32MZ4 808 aaKnown RBP14.1□□□□□ -0.15
CKAP4-202ENST00000552828 CCDC144BQ3MJ40 725 aa14.1□□□□□ -0.15
CKAP4-202ENST00000552828 TSHZ3Q63HK5 1081 aa14.1□□□□□ -0.15
CKAP4-202ENST00000552828 ANKRD35Q8N283 1001 aa14.1□□□□□ -0.15
CKAP4-202ENST00000552828 PCSK9Q8NBP7 692 aaKnown RBP14.1□□□□□ -0.15
CKAP4-202ENST00000552828 MYLIPQ8WY64 445 aa14.1□□□□□ -0.15
CKAP4-202ENST00000552828 GLT1D1Q96MS3 346 aa14.1□□□□□ -0.15
CKAP4-202ENST00000552828 KATNBL1Q9H079 304 aa14.1□□□□□ -0.15
CKAP4-202ENST00000552828 CTDP1Q9Y5B0 961 aaPredicted RBP14.1□□□□□ -0.15
CKAP4-202ENST00000552828 MROH7Q68CQ1 1323 aa14.1□□□□□ -0.15
CKAP4-202ENST00000552828 PLXNA1Q9UIW2 1896 aa14.1□□□□□ -0.15
CKAP4-202ENST00000552828 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.09□□□□□ -0.15
CKAP4-202ENST00000552828 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.09□□□□□ -0.15
CKAP4-202ENST00000552828 CTAGE5O15320 804 aa14.09□□□□□ -0.15
CKAP4-202ENST00000552828 APPP05067 770 aa14.09□□□□□ -0.15
CKAP4-202ENST00000552828 ASGR1P07306 291 aa14.09□□□□□ -0.15
CKAP4-202ENST00000552828 BMP3P12645 472 aa14.09□□□□□ -0.15
CKAP4-202ENST00000552828 SLFN13Q68D06 897 aa14.09□□□□□ -0.15
CKAP4-202ENST00000552828 MFSD5Q6N075 450 aa14.09□□□□□ -0.15
CKAP4-202ENST00000552828 ARMCX2Q7L311 632 aa14.09□□□□□ -0.15
CKAP4-202ENST00000552828 FAM133AQ8N9E0 248 aa14.09□□□□□ -0.15
CKAP4-202ENST00000552828 NACAP1Q9BZK3 213 aa14.09□□□□□ -0.15
CKAP4-202ENST00000552828 RWDD1Q9H446 243 aaPredicted RBP14.09□□□□□ -0.15
CKAP4-202ENST00000552828 SPC25Q9HBM1 224 aa14.09□□□□□ -0.15
CKAP4-202ENST00000552828 TTC28Q96AY4 2481 aa14.09□□□□□ -0.15
CKAP4-202ENST00000552828 TTC41PQ6P2S7 1318 aa14.09□□□□□ -0.15
CKAP4-202ENST00000552828 CHD9Q3L8U1 2897 aa14.08□□□□□ -0.15
CKAP4-202ENST00000552828 ARVCFO00192 962 aa14.08□□□□□ -0.16
CKAP4-202ENST00000552828 PLA2G6O60733 806 aa14.08□□□□□ -0.16
CKAP4-202ENST00000552828 C6orf222P0C671 652 aaPredicted RBP14.08□□□□□ -0.16
CKAP4-202ENST00000552828 IRX5P78411 483 aaPredicted RBP14.08□□□□□ -0.16
CKAP4-202ENST00000552828 PDE4BQ07343 736 aa14.08□□□□□ -0.16
CKAP4-202ENST00000552828 RASIP1Q5U651 963 aa14.08□□□□□ -0.16
CKAP4-202ENST00000552828 C16orf59Q7L2K0 433 aa14.08□□□□□ -0.16
CKAP4-202ENST00000552828 CCDC144CPQ8IYA2 1237 aa14.08□□□□□ -0.16
CKAP4-202ENST00000552828 LRRC47Q8N1G4 583 aaKnown RBP14.08□□□□□ -0.16
CKAP4-202ENST00000552828 GMCL1Q96IK5 515 aa14.08□□□□□ -0.16
CKAP4-202ENST00000552828 A0A0U1RQG5 324 aaPredicted RBP14.07□□□□□ -0.16
CKAP4-202ENST00000552828 TMEM232C9JQI7 657 aa14.07□□□□□ -0.16
CKAP4-202ENST00000552828 SLC3A2P08195 630 aaKnown RBP14.07□□□□□ -0.16
CKAP4-202ENST00000552828 TSPY3P0CV98 308 aa14.07□□□□□ -0.16
CKAP4-202ENST00000552828 TSPY8P0CW00 308 aa14.07□□□□□ -0.16
CKAP4-202ENST00000552828 FOSL2P15408 326 aa14.07□□□□□ -0.16
CKAP4-202ENST00000552828 SLC4A3P48751 1232 aa14.07□□□□□ -0.16
CKAP4-202ENST00000552828 STAT2P52630 851 aa14.07□□□□□ -0.16
CKAP4-202ENST00000552828 TFAP4Q01664 338 aa14.07□□□□□ -0.16
CKAP4-202ENST00000552828 CNTN2Q02246 1040 aa14.07□□□□□ -0.16
CKAP4-202ENST00000552828 TKFCQ3LXA3 575 aa14.07□□□□□ -0.16
CKAP4-202ENST00000552828 GNASQ5JWF2 1037 aa14.07□□□□□ -0.16
CKAP4-202ENST00000552828 PPP4R3BQ5MIZ7 849 aa14.07□□□□□ -0.16
CKAP4-202ENST00000552828 FAM160B2Q86V87 743 aa14.07□□□□□ -0.16
CKAP4-202ENST00000552828 PI4K2BQ8TCG2 481 aa14.07□□□□□ -0.16
CKAP4-202ENST00000552828 CHURC1Q8WUH1 139 aa14.07□□□□□ -0.16
CKAP4-202ENST00000552828 STAG1Q8WVM7 1258 aa14.07□□□□□ -0.16
CKAP4-202ENST00000552828 SEC62Q99442 399 aaKnown RBP14.07□□□□□ -0.16
CKAP4-202ENST00000552828 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.07□□□□□ -0.16
CKAP4-202ENST00000552828 ACAD9Q9H845 621 aa14.07□□□□□ -0.16
CKAP4-202ENST00000552828 ZBTB47Q9UFB7 747 aaPredicted RBP14.07□□□□□ -0.16
CKAP4-202ENST00000552828 ZNF536O15090 1300 aa14.07□□□□□ -0.16
CKAP4-202ENST00000552828 MUC3AQ02505 3323 aa14.07□□□□□ -0.16
CKAP4-202ENST00000552828 ERC2O15083 957 aa14.06□□□□□ -0.16
CKAP4-202ENST00000552828 CD4P01730 458 aa14.06□□□□□ -0.16
CKAP4-202ENST00000552828 DNAJB2P25686 324 aa14.06□□□□□ -0.16
CKAP4-202ENST00000552828 PPARAQ07869 468 aa14.06□□□□□ -0.16
CKAP4-202ENST00000552828 PPIGQ13427 754 aaKnown RBP eCLIP14.06□□□□□ -0.16
CKAP4-202ENST00000552828 GRIN2CQ14957 1233 aa14.06□□□□□ -0.16
CKAP4-202ENST00000552828 TMEM240Q5SV17 173 aa14.06□□□□□ -0.16
CKAP4-202ENST00000552828 ZMYM1Q5SVZ6 1142 aa14.06□□□□□ -0.16
CKAP4-202ENST00000552828 CCDC174Q6PII3 467 aa14.06□□□□□ -0.16
CKAP4-202ENST00000552828 FAM126BQ8IXS8 530 aa14.06□□□□□ -0.16
CKAP4-202ENST00000552828 SLC43A3Q8NBI5 491 aa14.06□□□□□ -0.16
CKAP4-202ENST00000552828 A1CFQ9NQ94 594 aaKnown RBP14.06□□□□□ -0.16
CKAP4-202ENST00000552828 SOWAHBA6NEL2 793 aa14.05□□□□□ -0.16
CKAP4-202ENST00000552828 ASB14A6NK59 587 aa14.05□□□□□ -0.16
CKAP4-202ENST00000552828 FOXP2O15409 715 aa14.05□□□□□ -0.16
CKAP4-202ENST00000552828 SLC1A4P43007 532 aa14.05□□□□□ -0.16
CKAP4-202ENST00000552828 NOVP48745 357 aa14.05□□□□□ -0.16
CKAP4-202ENST00000552828 TNFAIP2Q03169 654 aa14.05□□□□□ -0.16
CKAP4-202ENST00000552828 TMEM199Q8N511 208 aa14.05□□□□□ -0.16
CKAP4-202ENST00000552828 AGBL1Q96MI9 1066 aa14.05□□□□□ -0.16
CKAP4-202ENST00000552828 NAPBQ9H115 298 aa14.05□□□□□ -0.16
CKAP4-202ENST00000552828 ZNF576Q9H609 170 aa14.05□□□□□ -0.16
CKAP4-202ENST00000552828 HOMER2Q9NSB8 354 aa14.05□□□□□ -0.16
CKAP4-202ENST00000552828 RNF146Q9NTX7 359 aa14.05□□□□□ -0.16
CKAP4-202ENST00000552828 GNEQ9Y223 722 aaKnown RBP14.05□□□□□ -0.16
CKAP4-202ENST00000552828 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.05□□□□□ -0.16
CKAP4-202ENST00000552828 ASTN1O14525 1302 aa14.05□□□□□ -0.16
CKAP4-202ENST00000552828 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.04□□□□□ -0.16
CKAP4-202ENST00000552828 CABYRO75952 493 aa14.04□□□□□ -0.16
CKAP4-202ENST00000552828 CSF2RAP15509 400 aa14.04□□□□□ -0.16
CKAP4-202ENST00000552828 MCCP23508 829 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms