RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 SNRNP48Q6IEG0 339 aaKnown RBP11.57□□□□□ -0.56
LETMD1-234ENST00000552645 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.57□□□□□ -0.56
LETMD1-234ENST00000552645 RUFY3Q7L099 469 aa11.57□□□□□ -0.56
LETMD1-234ENST00000552645 MICU3Q86XE3 530 aa11.57□□□□□ -0.56
LETMD1-234ENST00000552645 STAG2Q8N3U4 1231 aa11.57□□□□□ -0.56
LETMD1-234ENST00000552645 CTCFLQ8NI51 663 aaPredicted RBP11.57□□□□□ -0.56
LETMD1-234ENST00000552645 MTA3Q9BTC8 594 aa11.57□□□□□ -0.56
LETMD1-234ENST00000552645 MOV10L1Q9BXT6 1211 aaKnown RBP11.57□□□□□ -0.56
LETMD1-234ENST00000552645 SLC38A10Q9HBR0 1119 aa11.57□□□□□ -0.56
LETMD1-234ENST00000552645 HOMER2Q9NSB8 354 aa11.57□□□□□ -0.56
LETMD1-234ENST00000552645 WDR19Q8NEZ3 1342 aa11.56□□□□□ -0.56
LETMD1-234ENST00000552645 CENPFP49454 3210 aa11.56□□□□□ -0.56
LETMD1-234ENST00000552645 KLF18A0A0U1RQI7 1052 aa11.56□□□□□ -0.56
LETMD1-234ENST00000552645 KLRF2D3W0D1 207 aa11.56□□□□□ -0.56
LETMD1-234ENST00000552645 ERCC3P19447 782 aa11.56□□□□□ -0.56
LETMD1-234ENST00000552645 HOXD10P28358 340 aa11.56□□□□□ -0.56
LETMD1-234ENST00000552645 MAPK4P31152 587 aa11.56□□□□□ -0.56
LETMD1-234ENST00000552645 STAT3P40763 770 aa11.56□□□□□ -0.56
LETMD1-234ENST00000552645 APOBRQ0VD83 1088 aa11.56□□□□□ -0.56
LETMD1-234ENST00000552645 PIBF1Q8WXW3 757 aa11.56□□□□□ -0.56
LETMD1-234ENST00000552645 BRF1Q92994 677 aa11.56□□□□□ -0.56
LETMD1-234ENST00000552645 ZNF214Q9UL59 606 aaPredicted RBP11.56□□□□□ -0.56
LETMD1-234ENST00000552645 ADAMTS5Q9UNA0 930 aa11.56□□□□□ -0.56
LETMD1-234ENST00000552645 IVNS1ABPQ9Y6Y0 642 aa11.56□□□□□ -0.56
LETMD1-234ENST00000552645 OFD1O75665 1012 aa11.55□□□□□ -0.56
LETMD1-234ENST00000552645 DDAH1O94760 285 aa11.55□□□□□ -0.56
LETMD1-234ENST00000552645 TAL1P17542 331 aaPredicted RBP11.55□□□□□ -0.56
LETMD1-234ENST00000552645 PRKCZQ05513 592 aa11.55□□□□□ -0.56
LETMD1-234ENST00000552645 TROAPQ12815 778 aa11.55□□□□□ -0.56
LETMD1-234ENST00000552645 GRM4Q14833 912 aa11.55□□□□□ -0.56
LETMD1-234ENST00000552645 GPR142Q7Z601 462 aa11.55□□□□□ -0.56
LETMD1-234ENST00000552645 PLEKHH3Q7Z736 793 aa11.55□□□□□ -0.56
LETMD1-234ENST00000552645 RAET1EQ8TD07 263 aa11.55□□□□□ -0.56
LETMD1-234ENST00000552645 AGBL1Q96MI9 1066 aa11.55□□□□□ -0.56
LETMD1-234ENST00000552645 LARP6Q9BRS8 491 aaKnown RBP11.55□□□□□ -0.56
LETMD1-234ENST00000552645 TEX13BQ9BXU2 312 aa11.55□□□□□ -0.56
LETMD1-234ENST00000552645 ZSWIM6Q9HCJ5 1215 aa11.55□□□□□ -0.56
LETMD1-234ENST00000552645 PDRG1Q9NUG6 133 aa11.55□□□□□ -0.56
LETMD1-234ENST00000552645 MAD2L2Q9UI95 211 aa11.55□□□□□ -0.56
LETMD1-234ENST00000552645 GABRQQ9UN88 632 aa11.55□□□□□ -0.56
LETMD1-234ENST00000552645 ZBTB43O43298 467 aa11.54□□□□□ -0.56
LETMD1-234ENST00000552645 PLA2G6O60733 806 aa11.54□□□□□ -0.56
LETMD1-234ENST00000552645 CALM1P0DP23 149 aa11.54□□□□□ -0.56
LETMD1-234ENST00000552645 CALM2P0DP24 149 aa11.54□□□□□ -0.56
LETMD1-234ENST00000552645 CALM3P0DP25 149 aa11.54□□□□□ -0.56
LETMD1-234ENST00000552645 ALAS1P13196 640 aa11.54□□□□□ -0.56
LETMD1-234ENST00000552645 KIF5BP33176 963 aa11.54□□□□□ -0.56
LETMD1-234ENST00000552645 ANAPC15P60006 121 aa11.54□□□□□ -0.56
LETMD1-234ENST00000552645 CCDC173Q0VFZ6 552 aa11.54□□□□□ -0.56
LETMD1-234ENST00000552645 APOA5Q6Q788 366 aa11.54□□□□□ -0.56
LETMD1-234ENST00000552645 BTNL9Q6UXG8 535 aa11.54□□□□□ -0.56
LETMD1-234ENST00000552645 HOMER1Q86YM7 354 aa11.54□□□□□ -0.56
LETMD1-234ENST00000552645 ADGRF4Q8IZF3 695 aa11.54□□□□□ -0.56
LETMD1-234ENST00000552645 CMTR1Q8N1G2 835 aaKnown RBP11.54□□□□□ -0.56
LETMD1-234ENST00000552645 REPS2Q8NFH8 660 aa11.54□□□□□ -0.56
LETMD1-234ENST00000552645 C22orf23Q9BZE7 217 aa11.54□□□□□ -0.56
LETMD1-234ENST00000552645 TM6SF1Q9BZW5 370 aa11.54□□□□□ -0.56
LETMD1-234ENST00000552645 MCOLN1Q9GZU1 580 aa11.54□□□□□ -0.56
LETMD1-234ENST00000552645 SRRDQ9UH36 339 aa11.54□□□□□ -0.56
LETMD1-234ENST00000552645 CCPG1Q9ULG6 757 aa11.54□□□□□ -0.56
LETMD1-234ENST00000552645 HTTP42858 3142 aa11.53□□□□□ -0.56
LETMD1-234ENST00000552645 PALM3A6NDB9 673 aaPredicted RBP11.53□□□□□ -0.56
LETMD1-234ENST00000552645 GOLGA8BA8MQT2 603 aa11.53□□□□□ -0.56
LETMD1-234ENST00000552645 SLC25A27O95847 323 aa11.53□□□□□ -0.56
LETMD1-234ENST00000552645 GNRH1P01148 92 aa11.53□□□□□ -0.56
LETMD1-234ENST00000552645 FDX1P10109 184 aa11.53□□□□□ -0.56
LETMD1-234ENST00000552645 FLT3LGP49771 235 aa11.53□□□□□ -0.56
LETMD1-234ENST00000552645 CDC37Q16543 378 aaPredicted RBP11.53□□□□□ -0.56
LETMD1-234ENST00000552645 USH1GQ495M9 461 aa11.53□□□□□ -0.56
LETMD1-234ENST00000552645 NOL8Q76FK4 1167 aaKnown RBP11.53□□□□□ -0.56
LETMD1-234ENST00000552645 SGMS1Q86VZ5 419 aa11.53□□□□□ -0.56
LETMD1-234ENST00000552645 RIOX2Q8IUF8 465 aa11.53□□□□□ -0.56
LETMD1-234ENST00000552645 TNS4Q8IZW8 715 aa11.53□□□□□ -0.56
LETMD1-234ENST00000552645 CCDC82Q8N4S0 544 aa11.53□□□□□ -0.56
LETMD1-234ENST00000552645 PPP1R9BQ96SB3 815 aa11.53□□□□□ -0.56
LETMD1-234ENST00000552645 RANBP17Q9H2T7 1088 aaKnown RBP11.53□□□□□ -0.56
LETMD1-234ENST00000552645 MROH8Q9H579 483 aa11.53□□□□□ -0.56
LETMD1-234ENST00000552645 RIPK3Q9Y572 518 aa11.53□□□□□ -0.56
LETMD1-234ENST00000552645 PTCH2Q9Y6C5 1203 aa11.53□□□□□ -0.56
LETMD1-234ENST00000552645 GOLGA8AA7E2F4 631 aa11.53□□□□□ -0.56
LETMD1-234ENST00000552645 MYCP01106 439 aaPredicted RBP11.53□□□□□ -0.56
LETMD1-234ENST00000552645 FCER1AP12319 257 aa11.53□□□□□ -0.56
LETMD1-234ENST00000552645 CYP2B6P20813 491 aa11.53□□□□□ -0.56
LETMD1-234ENST00000552645 OAZ1P54368 228 aa11.53□□□□□ -0.56
LETMD1-234ENST00000552645 PKN2Q16513 984 aaKnown RBP11.53□□□□□ -0.56
LETMD1-234ENST00000552645 FBXO46Q6PJ61 603 aaPredicted RBP11.53□□□□□ -0.56
LETMD1-234ENST00000552645 FANCBQ8NB91 859 aa11.53□□□□□ -0.56
LETMD1-234ENST00000552645 SHCBP1Q8NEM2 672 aa11.53□□□□□ -0.56
LETMD1-234ENST00000552645 MMP19Q99542 508 aa11.53□□□□□ -0.56
LETMD1-234ENST00000552645 NUDT12Q9BQG2 462 aa11.53□□□□□ -0.56
LETMD1-234ENST00000552645 JMJD4Q9H9V9 463 aa11.53□□□□□ -0.56
LETMD1-234ENST00000552645 BIN2Q9UBW5 565 aaPredicted RBP11.53□□□□□ -0.56
LETMD1-234ENST00000552645 PTPN22Q9Y2R2 807 aa11.53□□□□□ -0.56
LETMD1-234ENST00000552645 PLXNA1Q9UIW2 1896 aa11.52□□□□□ -0.56
LETMD1-234ENST00000552645 ZNF536O15090 1300 aa11.52□□□□□ -0.57
LETMD1-234ENST00000552645 PLEKHA8P1O95397 391 aa11.52□□□□□ -0.57
LETMD1-234ENST00000552645 ICAM1P05362 532 aa11.52□□□□□ -0.57
LETMD1-234ENST00000552645 PTPREP23469 700 aa11.52□□□□□ -0.57
LETMD1-234ENST00000552645 NEK4P51957 841 aa11.52□□□□□ -0.57
LETMD1-234ENST00000552645 TOB2Q14106 344 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms